RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
PTMA-202ENST00000409115 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
PTMA-202ENST00000409115 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
PTMA-202ENST00000409115 SENP3Q9H4L4 574 aaPredicted RBP25.98■■□□□ 1.75
PTMA-202ENST00000409115 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
PTMA-202ENST00000409115 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
PTMA-202ENST00000409115 FOXD1Q16676 465 aa24.02■■□□□ 1.44
PTMA-202ENST00000409115 ADRA2BP18089 450 aa23.41■■□□□ 1.34
PTMA-202ENST00000409115 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
PTMA-202ENST00000409115 PIAS4Q8N2W9 510 aaPredicted RBP22.8■■□□□ 1.24
PTMA-202ENST00000409115 POTEDQ86YR6 584 aa22.36■■□□□ 1.17
PTMA-202ENST00000409115 ABCC9O60706 1549 aa22.16■■□□□ 1.14
PTMA-202ENST00000409115 MSH5O43196 834 aa22.06■■□□□ 1.12
PTMA-202ENST00000409115 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
PTMA-202ENST00000409115 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
PTMA-202ENST00000409115 KCNA4P22459 653 aa21.8■■□□□ 1.08
PTMA-202ENST00000409115 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
PTMA-202ENST00000409115 NCBP3Q53F19 620 aaKnown RBP21.45■■□□□ 1.02
PTMA-202ENST00000409115 CNKSR2Q8WXI2 1034 aa21.19■□□□□ 0.98
PTMA-202ENST00000409115 NPM3O75607 178 aaKnown RBP21.11■□□□□ 0.97
PTMA-202ENST00000409115 MAPK8IP2Q13387 824 aaPredicted RBP21.11■□□□□ 0.97
PTMA-202ENST00000409115 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
PTMA-202ENST00000409115 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
PTMA-202ENST00000409115 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
PTMA-202ENST00000409115 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
PTMA-202ENST00000409115 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
PTMA-202ENST00000409115 NACADO15069 1562 aa20.74■□□□□ 0.91
PTMA-202ENST00000409115 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
PTMA-202ENST00000409115 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
PTMA-202ENST00000409115 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
PTMA-202ENST00000409115 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
PTMA-202ENST00000409115 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
PTMA-202ENST00000409115 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
PTMA-202ENST00000409115 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
PTMA-202ENST00000409115 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
PTMA-202ENST00000409115 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
PTMA-202ENST00000409115 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
PTMA-202ENST00000409115 ZBTB22O15209 634 aa20.05■□□□□ 0.8
PTMA-202ENST00000409115 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
PTMA-202ENST00000409115 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.8
PTMA-202ENST00000409115 FOXD4L1Q9NU39 408 aa19.99■□□□□ 0.79
PTMA-202ENST00000409115 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
PTMA-202ENST00000409115 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
PTMA-202ENST00000409115 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
PTMA-202ENST00000409115 DCAF8L1A6NGE4 600 aa19.91■□□□□ 0.78
PTMA-202ENST00000409115 SLC4A2P04920 1241 aa19.81■□□□□ 0.76
PTMA-202ENST00000409115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.721e-12■■■■□ 24.5
PTMA-202ENST00000409115 MYCNP04198 464 aaPredicted RBP19.53■□□□□ 0.72
PTMA-202ENST00000409115 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
PTMA-202ENST00000409115 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
PTMA-202ENST00000409115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
PTMA-202ENST00000409115 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
PTMA-202ENST00000409115 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
PTMA-202ENST00000409115 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
PTMA-202ENST00000409115 SMARCA4P51532 1647 aa19.13■□□□□ 0.65
PTMA-202ENST00000409115 CACNB1Q02641 598 aaPredicted RBP19.09■□□□□ 0.65
PTMA-202ENST00000409115 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
PTMA-202ENST00000409115 CUX2O14529 1486 aa19.08■□□□□ 0.64
PTMA-202ENST00000409115 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
PTMA-202ENST00000409115 ATAD2BQ9ULI0 1458 aa19.06■□□□□ 0.64
PTMA-202ENST00000409115 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
PTMA-202ENST00000409115 NESP48681 1621 aa19.02■□□□□ 0.64
PTMA-202ENST00000409115 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
PTMA-202ENST00000409115 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
PTMA-202ENST00000409115 APLP2Q06481 763 aa18.92■□□□□ 0.62
PTMA-202ENST00000409115 ATF5Q9Y2D1 282 aaPredicted RBP18.92■□□□□ 0.62
PTMA-202ENST00000409115 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
PTMA-202ENST00000409115 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
PTMA-202ENST00000409115 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
PTMA-202ENST00000409115 RNF39Q9H2S5 420 aa18.9■□□□□ 0.62
PTMA-202ENST00000409115 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
PTMA-202ENST00000409115 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
PTMA-202ENST00000409115 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
PTMA-202ENST00000409115 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
PTMA-202ENST00000409115 WIZO95785 1651 aa18.68■□□□□ 0.58
PTMA-202ENST00000409115 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
PTMA-202ENST00000409115 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
PTMA-202ENST00000409115 CAPN15O75808 1086 aa18.55■□□□□ 0.56
PTMA-202ENST00000409115 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
PTMA-202ENST00000409115 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
PTMA-202ENST00000409115 WDR62O43379 1518 aa18.53■□□□□ 0.56
PTMA-202ENST00000409115 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
PTMA-202ENST00000409115 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
PTMA-202ENST00000409115 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
PTMA-202ENST00000409115 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
PTMA-202ENST00000409115 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
PTMA-202ENST00000409115 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
PTMA-202ENST00000409115 FKBP8Q14318 412 aa18.33■□□□□ 0.52
PTMA-202ENST00000409115 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
PTMA-202ENST00000409115 POLA2Q14181 598 aa18.31■□□□□ 0.52
PTMA-202ENST00000409115 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
PTMA-202ENST00000409115 CFTRP13569 1480 aa18.28■□□□□ 0.52
PTMA-202ENST00000409115 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
PTMA-202ENST00000409115 ABCB7O75027 752 aa18.23■□□□□ 0.51
PTMA-202ENST00000409115 FBLN2P98095 1184 aa18.17■□□□□ 0.5
PTMA-202ENST00000409115 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
PTMA-202ENST00000409115 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
PTMA-202ENST00000409115 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
PTMA-202ENST00000409115 MKRN4PQ13434 485 aaPredicted RBP18.12■□□□□ 0.49
PTMA-202ENST00000409115 DSG3P32926 999 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms