RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
INO80E-213ENST00000569957 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
INO80E-213ENST00000569957 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
INO80E-213ENST00000569957 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
INO80E-213ENST00000569957 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
INO80E-213ENST00000569957 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
INO80E-213ENST00000569957 ZCCHC6Q5VYS8 1495 aaKnown RBP20.63■□□□□ 0.89
INO80E-213ENST00000569957 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
INO80E-213ENST00000569957 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
INO80E-213ENST00000569957 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
INO80E-213ENST00000569957 ABCC9O60706 1549 aa20.19■□□□□ 0.82
INO80E-213ENST00000569957 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
INO80E-213ENST00000569957 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
INO80E-213ENST00000569957 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
INO80E-213ENST00000569957 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
INO80E-213ENST00000569957 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
INO80E-213ENST00000569957 PPARGC1BQ86YN6 1023 aaKnown RBP19.8■□□□□ 0.76
INO80E-213ENST00000569957 NACADO15069 1562 aa19.76■□□□□ 0.75
INO80E-213ENST00000569957 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
INO80E-213ENST00000569957 APLP2Q06481 763 aa19.72■□□□□ 0.75
INO80E-213ENST00000569957 MYT1Q01538 1121 aa19.66■□□□□ 0.74
INO80E-213ENST00000569957 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
INO80E-213ENST00000569957 CHIC1Q5VXU3 224 aa19.62■□□□□ 0.73
INO80E-213ENST00000569957 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
INO80E-213ENST00000569957 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
INO80E-213ENST00000569957 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.721e-6■■■□□ 19
INO80E-213ENST00000569957 ATP1B4Q9UN42 357 aaPredicted RBP19.51■□□□□ 0.71
INO80E-213ENST00000569957 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
INO80E-213ENST00000569957 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
INO80E-213ENST00000569957 TRIM26Q12899 539 aaPredicted RBP19.09■□□□□ 0.65
INO80E-213ENST00000569957 ITGAEP38570 1179 aa19.08■□□□□ 0.64
INO80E-213ENST00000569957 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
INO80E-213ENST00000569957 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
INO80E-213ENST00000569957 CENPBP07199 599 aaPredicted RBP19■□□□□ 0.63
INO80E-213ENST00000569957 HNRNPUL2Q1KMD3 747 aaKnown RBP19■□□□□ 0.63
INO80E-213ENST00000569957 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
INO80E-213ENST00000569957 HRCP23327 699 aa18.96■□□□□ 0.63
INO80E-213ENST00000569957 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
INO80E-213ENST00000569957 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
INO80E-213ENST00000569957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
INO80E-213ENST00000569957 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
INO80E-213ENST00000569957 WIZO95785 1651 aa18.74■□□□□ 0.59
INO80E-213ENST00000569957 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
INO80E-213ENST00000569957 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
INO80E-213ENST00000569957 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
INO80E-213ENST00000569957 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.57
INO80E-213ENST00000569957 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
INO80E-213ENST00000569957 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
INO80E-213ENST00000569957 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
INO80E-213ENST00000569957 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
INO80E-213ENST00000569957 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
INO80E-213ENST00000569957 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
INO80E-213ENST00000569957 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
INO80E-213ENST00000569957 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
INO80E-213ENST00000569957 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
INO80E-213ENST00000569957 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
INO80E-213ENST00000569957 FBLN2P98095 1184 aa18.42■□□□□ 0.54
INO80E-213ENST00000569957 ATAD2BQ9ULI0 1458 aa18.42■□□□□ 0.54
INO80E-213ENST00000569957 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
INO80E-213ENST00000569957 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
INO80E-213ENST00000569957 DIEXFQ68CQ4 756 aaKnown RBP18.31■□□□□ 0.52
INO80E-213ENST00000569957 EEA1Q15075 1411 aa18.31■□□□□ 0.52
INO80E-213ENST00000569957 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
INO80E-213ENST00000569957 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
INO80E-213ENST00000569957 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
INO80E-213ENST00000569957 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
INO80E-213ENST00000569957 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
INO80E-213ENST00000569957 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
INO80E-213ENST00000569957 NEFLP07196 543 aa18.15■□□□□ 0.5
INO80E-213ENST00000569957 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
INO80E-213ENST00000569957 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
INO80E-213ENST00000569957 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
INO80E-213ENST00000569957 TNIKQ9UKE5 1360 aa18■□□□□ 0.47
INO80E-213ENST00000569957 SOGA1O94964 1423 aa18■□□□□ 0.47
INO80E-213ENST00000569957 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
INO80E-213ENST00000569957 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
INO80E-213ENST00000569957 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
INO80E-213ENST00000569957 CLIP1P30622 1438 aa17.94■□□□□ 0.46
INO80E-213ENST00000569957 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
INO80E-213ENST00000569957 CEP162Q5TB80 1403 aa17.93■□□□□ 0.46
INO80E-213ENST00000569957 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
INO80E-213ENST00000569957 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
INO80E-213ENST00000569957 CFTRP13569 1480 aa17.89■□□□□ 0.45
INO80E-213ENST00000569957 BCANQ96GW7 911 aa17.88■□□□□ 0.45
INO80E-213ENST00000569957 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
INO80E-213ENST00000569957 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
INO80E-213ENST00000569957 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
INO80E-213ENST00000569957 TOP2BQ02880 1626 aa17.84■□□□□ 0.45
INO80E-213ENST00000569957 CUX2O14529 1486 aa17.81■□□□□ 0.44
INO80E-213ENST00000569957 HIRIP3Q9BW71 556 aaPredicted RBP17.8■□□□□ 0.44
INO80E-213ENST00000569957 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
INO80E-213ENST00000569957 RUSC2Q8N2Y8 1516 aa17.78■□□□□ 0.44
INO80E-213ENST00000569957 KIF21BO75037 1637 aa17.77■□□□□ 0.43
INO80E-213ENST00000569957 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
INO80E-213ENST00000569957 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
INO80E-213ENST00000569957 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
INO80E-213ENST00000569957 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
INO80E-213ENST00000569957 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
INO80E-213ENST00000569957 DDX10Q13206 875 aaKnown RBP17.7■□□□□ 0.42
INO80E-213ENST00000569957 ANP32CO43423 234 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms