RNA–Protein interactions for RNA: ENST00000526195.5

CTSB-210, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-210ENST00000526195 NISCHQ9Y2I1 1504 aa39.53■■■■□ 3.92
CTSB-210ENST00000526195 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
CTSB-210ENST00000526195 ABCC9O60706 1549 aa34.67■■■■□ 3.14
CTSB-210ENST00000526195 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
CTSB-210ENST00000526195 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
CTSB-210ENST00000526195 NACADO15069 1562 aa33.11■■■□□ 2.89
CTSB-210ENST00000526195 ZCCHC6Q5VYS8 1495 aaKnown RBP32.89■■■□□ 2.86
CTSB-210ENST00000526195 MYO15BQ96JP2 1530 aa32.84■■■□□ 2.85
CTSB-210ENST00000526195 DCAF1Q9Y4B6 1507 aa32.65■■■□□ 2.82
CTSB-210ENST00000526195 UNC13AQ9UPW8 1703 aa32.42■■■□□ 2.78
CTSB-210ENST00000526195 PABPN1Q86U42 306 aaKnown RBP eCLIP32.41■■■□□ 2.78
CTSB-210ENST00000526195 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
CTSB-210ENST00000526195 SCRIBQ14160 1630 aa32.13■■■□□ 2.73
CTSB-210ENST00000526195 DNAJC5BQ9UF47 199 aa32.04■■■□□ 2.72
CTSB-210ENST00000526195 SHROOM4Q9ULL8 1493 aa31.8■■■□□ 2.68
CTSB-210ENST00000526195 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.62
CTSB-210ENST00000526195 CC2D2AQ9P2K1 1620 aa31.31■■■□□ 2.6
CTSB-210ENST00000526195 CECR2Q9BXF3 1484 aa31.15■■■□□ 2.58
CTSB-210ENST00000526195 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
CTSB-210ENST00000526195 BAZ1AQ9NRL2 1556 aaPredicted RBP30.62■■■□□ 2.49
CTSB-210ENST00000526195 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
CTSB-210ENST00000526195 NCAPD3P42695 1498 aa30.59■■■□□ 2.49
CTSB-210ENST00000526195 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
CTSB-210ENST00000526195 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
CTSB-210ENST00000526195 HMGXB3Q12766 1538 aa30.39■■■□□ 2.46
CTSB-210ENST00000526195 PEG3Q9GZU2 1588 aa30.38■■■□□ 2.45
CTSB-210ENST00000526195 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
CTSB-210ENST00000526195 WIZO95785 1651 aa30.12■■■□□ 2.41
CTSB-210ENST00000526195 RSF1Q96T23 1441 aaPredicted RBP30.08■■■□□ 2.41
CTSB-210ENST00000526195 NESP48681 1621 aa29.96■■■□□ 2.39
CTSB-210ENST00000526195 ERCC6Q03468 1493 aa29.86■■■□□ 2.37
CTSB-210ENST00000526195 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
CTSB-210ENST00000526195 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
CTSB-210ENST00000526195 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
CTSB-210ENST00000526195 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
CTSB-210ENST00000526195 CUX2O14529 1486 aa29.57■■■□□ 2.32
CTSB-210ENST00000526195 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
CTSB-210ENST00000526195 CFTRP13569 1480 aa29.48■■■□□ 2.31
CTSB-210ENST00000526195 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
CTSB-210ENST00000526195 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
CTSB-210ENST00000526195 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
CTSB-210ENST00000526195 MRC2Q9UBG0 1479 aa29.32■■■□□ 2.28
CTSB-210ENST00000526195 CEP164Q9UPV0 1460 aa29.32■■■□□ 2.28
CTSB-210ENST00000526195 WDR62O43379 1518 aa29.22■■■□□ 2.27
CTSB-210ENST00000526195 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
CTSB-210ENST00000526195 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
CTSB-210ENST00000526195 URB2Q14146 1524 aaKnown RBP29.1■■■□□ 2.25
CTSB-210ENST00000526195 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
CTSB-210ENST00000526195 TOPBP1Q92547 1522 aa28.87■■■□□ 2.21
CTSB-210ENST00000526195 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
CTSB-210ENST00000526195 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
CTSB-210ENST00000526195 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
CTSB-210ENST00000526195 ZNF608Q9ULD9 1512 aaPredicted RBP28.66■■■□□ 2.18
CTSB-210ENST00000526195 POLA1P09884 1462 aaPredicted RBP28.63■■■□□ 2.17
CTSB-210ENST00000526195 CUX1P39880 1505 aa28.6■■■□□ 2.17
CTSB-210ENST00000526195 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
CTSB-210ENST00000526195 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
CTSB-210ENST00000526195 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
CTSB-210ENST00000526195 SOGA1O94964 1423 aa28.5■■■□□ 2.15
CTSB-210ENST00000526195 EIF4G3O43432 1585 aaKnown RBP28.48■■■□□ 2.15
CTSB-210ENST00000526195 AQRO60306 1485 aaKnown RBP eCLIP28.47■■■□□ 2.153e-7■■■■■ 33.3
CTSB-210ENST00000526195 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
CTSB-210ENST00000526195 OSCARQ8IYS5 282 aa28.36■■■□□ 2.13
CTSB-210ENST00000526195 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
CTSB-210ENST00000526195 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
CTSB-210ENST00000526195 TOP2BQ02880 1626 aa28.27■■■□□ 2.12
CTSB-210ENST00000526195 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
CTSB-210ENST00000526195 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
CTSB-210ENST00000526195 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
CTSB-210ENST00000526195 SNAPC4Q5SXM2 1469 aa28.18■■■□□ 2.1
CTSB-210ENST00000526195 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
CTSB-210ENST00000526195 FBLN2P98095 1184 aa28.17■■■□□ 2.1
CTSB-210ENST00000526195 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
CTSB-210ENST00000526195 CHD1O14646 1710 aa28.12■■■□□ 2.09
CTSB-210ENST00000526195 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
CTSB-210ENST00000526195 MAGI1Q96QZ7 1491 aaPredicted RBP28.09■■■□□ 2.09
CTSB-210ENST00000526195 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
CTSB-210ENST00000526195 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
CTSB-210ENST00000526195 SYNJ2O15056 1496 aa28.01■■■□□ 2.07
CTSB-210ENST00000526195 TRIM41Q8WV44 630 aa27.94■■■□□ 2.06
CTSB-210ENST00000526195 RIMBP3CA6NJZ7 1639 aa27.9■■■□□ 2.06
CTSB-210ENST00000526195 RIMBP3BA6NNM3 1639 aa27.9■■■□□ 2.06
CTSB-210ENST00000526195 RIMBP3Q9UFD9 1639 aa27.9■■■□□ 2.06
CTSB-210ENST00000526195 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
CTSB-210ENST00000526195 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
CTSB-210ENST00000526195 ADAMTS12P58397 1594 aa27.86■■■□□ 2.05
CTSB-210ENST00000526195 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
CTSB-210ENST00000526195 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
CTSB-210ENST00000526195 GRIN2AQ12879 1464 aa27.82■■■□□ 2.04
CTSB-210ENST00000526195 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
CTSB-210ENST00000526195 NUP160Q12769 1436 aa27.71■■■□□ 2.03
CTSB-210ENST00000526195 IGF1RP08069 1367 aa27.71■■■□□ 2.03
CTSB-210ENST00000526195 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
CTSB-210ENST00000526195 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
CTSB-210ENST00000526195 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
CTSB-210ENST00000526195 CUL7Q14999 1698 aa27.54■■■□□ 2
CTSB-210ENST00000526195 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
CTSB-210ENST00000526195 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
CTSB-210ENST00000526195 ERCC6L2Q5T890 1561 aa27.51■■□□□ 1.99
CTSB-210ENST00000526195 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms