RNA–Protein interactions for RNA: ENST00000467086.5

P4HB-205, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 5

Gene P4HB, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-205ENST00000467086 NISCHQ9Y2I1 1504 aa57.14■■■■■ 6.74
P4HB-205ENST00000467086 CCDC180Q9P1Z9 1646 aa50.98■■■■■ 5.75
P4HB-205ENST00000467086 ABCC9O60706 1549 aa49.57■■■■■ 5.53
P4HB-205ENST00000467086 RB1CC1Q8TDY2 1594 aa47.95■■■■■ 5.27
P4HB-205ENST00000467086 NACADO15069 1562 aa47.92■■■■■ 5.26
P4HB-205ENST00000467086 MYO15BQ96JP2 1530 aa47.75■■■■■ 5.23
P4HB-205ENST00000467086 ZCCHC6Q5VYS8 1495 aaKnown RBP47.59■■■■■ 5.21
P4HB-205ENST00000467086 DCAF8L2P0C7V8 631 aa47.47■■■■■ 5.19
P4HB-205ENST00000467086 DCAF1Q9Y4B6 1507 aa47.46■■■■■ 5.19
P4HB-205ENST00000467086 UNC13AQ9UPW8 1703 aa46.74■■■■■ 5.07
P4HB-205ENST00000467086 BICRAQ9NZM4 1560 aa46.35■■■■■ 5.01
P4HB-205ENST00000467086 PABPN1Q86U42 306 aaKnown RBP eCLIP46.22■■■■■ 4.99
P4HB-205ENST00000467086 SHROOM4Q9ULL8 1493 aa46.22■■■■■ 4.99
P4HB-205ENST00000467086 SCRIBQ14160 1630 aa46.21■■■■■ 4.99
P4HB-205ENST00000467086 DNAJC5BQ9UF47 199 aa45.43■■■■■ 4.86
P4HB-205ENST00000467086 EIF4G1Q04637 1599 aaKnown RBP45.17■■■■■ 4.82
P4HB-205ENST00000467086 CC2D2AQ9P2K1 1620 aa44.97■■■■■ 4.79
P4HB-205ENST00000467086 CECR2Q9BXF3 1484 aa44.66■■■■■ 4.74
P4HB-205ENST00000467086 BAZ1AQ9NRL2 1556 aaPredicted RBP44.36■■■■■ 4.69
P4HB-205ENST00000467086 SMARCA4P51532 1647 aa44.34■■■■■ 4.69
P4HB-205ENST00000467086 SMARCA2P51531 1590 aa44.17■■■■■ 4.66
P4HB-205ENST00000467086 NCAPD3P42695 1498 aa44.16■■■■■ 4.66
P4HB-205ENST00000467086 ATAD2BQ9ULI0 1458 aa44.08■■■■■ 4.65
P4HB-205ENST00000467086 PEG3Q9GZU2 1588 aa44.03■■■■■ 4.64
P4HB-205ENST00000467086 HMGXB3Q12766 1538 aa43.99■■■■■ 4.63
P4HB-205ENST00000467086 MROH2BQ7Z745 1585 aa43.91■■■■■ 4.62
P4HB-205ENST00000467086 BAZ1BQ9UIG0 1483 aaKnown RBP43.74■■■■■ 4.59
P4HB-205ENST00000467086 RSF1Q96T23 1441 aaPredicted RBP43.44■■■■■ 4.54
P4HB-205ENST00000467086 WIZO95785 1651 aa43.43■■■■■ 4.54
P4HB-205ENST00000467086 TOP2AP11388 1531 aaKnown RBP43.1■■■■■ 4.49
P4HB-205ENST00000467086 LAMC3Q9Y6N6 1575 aa43.04■■■■■ 4.48
P4HB-205ENST00000467086 ERCC6Q03468 1493 aa42.86■■■■■ 4.45
P4HB-205ENST00000467086 NESP48681 1621 aa42.86■■■■■ 4.45
P4HB-205ENST00000467086 CADPSQ9ULU8 1353 aa42.82■■■■■ 4.45
P4HB-205ENST00000467086 PDS5BQ9NTI5 1447 aa42.73■■■■■ 4.43
P4HB-205ENST00000467086 CFTRP13569 1480 aa42.58■■■■■ 4.41
P4HB-205ENST00000467086 CUX2O14529 1486 aa42.57■■■■■ 4.41
P4HB-205ENST00000467086 CCDC88BA6NC98 1476 aa42.49■■■■■ 4.39
P4HB-205ENST00000467086 KIF21AQ7Z4S6 1674 aa42.47■■■■■ 4.39
P4HB-205ENST00000467086 THOC2Q8NI27 1593 aaKnown RBP42.39■■■■■ 4.38
P4HB-205ENST00000467086 PRDM2Q13029 1718 aa42.36■■■■■ 4.37
P4HB-205ENST00000467086 FANCD2Q9BXW9 1451 aa42.29■■■■■ 4.36
P4HB-205ENST00000467086 CEP164Q9UPV0 1460 aa42.28■■■■■ 4.36
P4HB-205ENST00000467086 MRC2Q9UBG0 1479 aa42.23■■■■■ 4.35
P4HB-205ENST00000467086 WDR62O43379 1518 aa42.11■■■■■ 4.33
P4HB-205ENST00000467086 SUPT5HO00267 1087 aaKnown RBP42.1■■■■■ 4.33
P4HB-205ENST00000467086 ABCC8Q09428 1581 aa41.82■■■■■ 4.29
P4HB-205ENST00000467086 URB2Q14146 1524 aaKnown RBP41.81■■■■■ 4.28
P4HB-205ENST00000467086 DNMBPQ6XZF7 1577 aa41.62■■■■■ 4.25
P4HB-205ENST00000467086 TOPBP1Q92547 1522 aa41.6■■■■■ 4.25
P4HB-205ENST00000467086 IFT140Q96RY7 1462 aa41.44■■■■■ 4.22
P4HB-205ENST00000467086 POLA1P09884 1462 aaPredicted RBP41.23■■■■■ 4.19
P4HB-205ENST00000467086 CUX1P39880 1505 aa41.23■■■■■ 4.19
P4HB-205ENST00000467086 DNAJC5Q9H3Z4 198 aa41.18■■■■■ 4.18
P4HB-205ENST00000467086 TARBP1Q13395 1621 aaKnown RBP41.18■■■■■ 4.18
P4HB-205ENST00000467086 WDR97A6NE52 1622 aa41.11■■■■■ 4.17
P4HB-205ENST00000467086 FGD5Q6ZNL6 1462 aa41.1■■■■■ 4.17
P4HB-205ENST00000467086 SOGA1O94964 1423 aa41.07■■■■■ 4.16
P4HB-205ENST00000467086 ZNF608Q9ULD9 1512 aaPredicted RBP41.05■■■■■ 4.16
P4HB-205ENST00000467086 WRNQ14191 1432 aaPredicted RBP eCLIP41.01■■■■■ 4.15
P4HB-205ENST00000467086 EIF4G3O43432 1585 aaKnown RBP41■■■■■ 4.15
P4HB-205ENST00000467086 BIVM-ERCC5R4GMW8 1640 aa40.98■■■■■ 4.15
P4HB-205ENST00000467086 TOP2BQ02880 1626 aa40.97■■■■■ 4.15
P4HB-205ENST00000467086 RAD54L2Q9Y4B4 1467 aa40.94■■■■■ 4.14
P4HB-205ENST00000467086 AQRO60306 1485 aaKnown RBP eCLIP40.83■■■■■ 4.131e-13■■■■■ 34.3
P4HB-205ENST00000467086 ABCA10Q8WWZ4 1543 aa40.82■■■■■ 4.12
P4HB-205ENST00000467086 SYNJ1O43426 1573 aa40.82■■■■■ 4.12
P4HB-205ENST00000467086 TDRD9Q8NDG6 1382 aaKnown RBP40.74■■■■■ 4.11
P4HB-205ENST00000467086 OSCARQ8IYS5 282 aa40.7■■■■■ 4.11
P4HB-205ENST00000467086 GRIN2BQ13224 1484 aa40.66■■■■■ 4.1
P4HB-205ENST00000467086 ABCA5Q8WWZ7 1642 aa40.63■■■■■ 4.09
P4HB-205ENST00000467086 GAPVD1Q14C86 1478 aa40.63■■■■■ 4.09
P4HB-205ENST00000467086 MAGI1Q96QZ7 1491 aaPredicted RBP40.62■■■■■ 4.09
P4HB-205ENST00000467086 PBRM1Q86U86 1689 aa40.55■■■■■ 4.08
P4HB-205ENST00000467086 SNAPC4Q5SXM2 1469 aa40.51■■■■■ 4.07
P4HB-205ENST00000467086 CHD1O14646 1710 aa40.48■■■■■ 4.07
P4HB-205ENST00000467086 SYNJ2O15056 1496 aa40.41■■■■■ 4.06
P4HB-205ENST00000467086 ERICH3Q5RHP9 1530 aa40.37■■■■■ 4.05
P4HB-205ENST00000467086 CHMP7Q8WUX9 453 aaPredicted RBP40.32■■■■■ 4.05
P4HB-205ENST00000467086 FBLN2P98095 1184 aa40.31■■■■■ 4.04
P4HB-205ENST00000467086 ADAMTS12P58397 1594 aa40.23■■■■■ 4.03
P4HB-205ENST00000467086 KIF27Q86VH2 1401 aa40.21■■■■■ 4.03
P4HB-205ENST00000467086 FHAD1B1AJZ9 1412 aa40.2■■■■■ 4.03
P4HB-205ENST00000467086 GRIN2AQ12879 1464 aa40.11■■■■■ 4.01
P4HB-205ENST00000467086 CLASP1Q7Z460 1538 aa40.1■■■■■ 4.01
P4HB-205ENST00000467086 CUL7Q14999 1698 aa40.02■■■■■ 4
P4HB-205ENST00000467086 ARHGEF11O15085 1522 aa40■■■■□ 3.99
P4HB-205ENST00000467086 RIMBP3CA6NJZ7 1639 aa39.99■■■■□ 3.99
P4HB-205ENST00000467086 RIMBP3BA6NNM3 1639 aa39.99■■■■□ 3.99
P4HB-205ENST00000467086 RIMBP3Q9UFD9 1639 aa39.99■■■■□ 3.99
P4HB-205ENST00000467086 IGF1RP08069 1367 aa39.97■■■■□ 3.99
P4HB-205ENST00000467086 NUP160Q12769 1436 aa39.96■■■■□ 3.99
P4HB-205ENST00000467086 TRIM41Q8WV44 630 aa39.93■■■■□ 3.98
P4HB-205ENST00000467086 CEP170Q5SW79 1584 aa39.84■■■■□ 3.97
P4HB-205ENST00000467086 CARMIL1Q5VZK9 1371 aa39.74■■■■□ 3.95
P4HB-205ENST00000467086 SHROOM2Q13796 1616 aa39.69■■■■□ 3.94
P4HB-205ENST00000467086 ARAP1Q96P48 1450 aa39.62■■■■□ 3.93
P4HB-205ENST00000467086 RUSC2Q8N2Y8 1516 aa39.62■■■■□ 3.93
P4HB-205ENST00000467086 KIAA0586Q9BVV6 1533 aa39.59■■■■□ 3.93
P4HB-205ENST00000467086 RAPGEF2Q9Y4G8 1499 aa39.56■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms