RNA–Protein interactions for RNA: ENST00000481928.1

PTMA-212, Transcript of prothymosin alpha, humanhuman

TSL 3

Gene PTMA, Length 1,635 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-212ENST00000481928 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
PTMA-212ENST00000481928 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
PTMA-212ENST00000481928 ABCC9O60706 1549 aa33.23■■■□□ 2.91
PTMA-212ENST00000481928 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
PTMA-212ENST00000481928 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
PTMA-212ENST00000481928 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
PTMA-212ENST00000481928 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
PTMA-212ENST00000481928 NACADO15069 1562 aa32.48■■■□□ 2.79
PTMA-212ENST00000481928 RB1CC1Q8TDY2 1594 aa32.33■■■□□ 2.77
PTMA-212ENST00000481928 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
PTMA-212ENST00000481928 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
PTMA-212ENST00000481928 SHROOM4Q9ULL8 1493 aa31.44■■■□□ 2.62
PTMA-212ENST00000481928 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.6
PTMA-212ENST00000481928 PABPN1Q86U42 306 aaKnown RBP eCLIP31.16■■■□□ 2.58
PTMA-212ENST00000481928 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
PTMA-212ENST00000481928 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
PTMA-212ENST00000481928 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
PTMA-212ENST00000481928 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
PTMA-212ENST00000481928 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
PTMA-212ENST00000481928 RSF1Q96T23 1441 aaPredicted RBP30.26■■■□□ 2.44
PTMA-212ENST00000481928 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
PTMA-212ENST00000481928 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
PTMA-212ENST00000481928 CC2D2AQ9P2K1 1620 aa30.09■■■□□ 2.41
PTMA-212ENST00000481928 ATAD2BQ9ULI0 1458 aa30.07■■■□□ 2.4
PTMA-212ENST00000481928 WIZO95785 1651 aa29.98■■■□□ 2.39
PTMA-212ENST00000481928 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
PTMA-212ENST00000481928 NCAPD3P42695 1498 aa29.98■■■□□ 2.39
PTMA-212ENST00000481928 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
PTMA-212ENST00000481928 HMGXB3Q12766 1538 aa29.89■■■□□ 2.37
PTMA-212ENST00000481928 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
PTMA-212ENST00000481928 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
PTMA-212ENST00000481928 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
PTMA-212ENST00000481928 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
PTMA-212ENST00000481928 CFTRP13569 1480 aa29.11■■■□□ 2.25
PTMA-212ENST00000481928 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
PTMA-212ENST00000481928 NESP48681 1621 aa28.94■■■□□ 2.22
PTMA-212ENST00000481928 PDS5BQ9NTI5 1447 aa28.87■■■□□ 2.21
PTMA-212ENST00000481928 PRDM2Q13029 1718 aa28.84■■■□□ 2.21
PTMA-212ENST00000481928 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
PTMA-212ENST00000481928 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
PTMA-212ENST00000481928 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
PTMA-212ENST00000481928 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
PTMA-212ENST00000481928 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
PTMA-212ENST00000481928 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
PTMA-212ENST00000481928 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
PTMA-212ENST00000481928 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
PTMA-212ENST00000481928 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
PTMA-212ENST00000481928 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
PTMA-212ENST00000481928 CUX1P39880 1505 aa28.4■■■□□ 2.14
PTMA-212ENST00000481928 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
PTMA-212ENST00000481928 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
PTMA-212ENST00000481928 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
PTMA-212ENST00000481928 WDR62O43379 1518 aa28.37■■■□□ 2.13
PTMA-212ENST00000481928 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
PTMA-212ENST00000481928 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
PTMA-212ENST00000481928 BIVM-ERCC5R4GMW8 1640 aa28.34■■■□□ 2.13
PTMA-212ENST00000481928 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
PTMA-212ENST00000481928 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.11
PTMA-212ENST00000481928 CUX2O14529 1486 aa28.11■■■□□ 2.09
PTMA-212ENST00000481928 SOGA1O94964 1423 aa28.1■■■□□ 2.09
PTMA-212ENST00000481928 IFT140Q96RY7 1462 aa28.07■■■□□ 2.08
PTMA-212ENST00000481928 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
PTMA-212ENST00000481928 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
PTMA-212ENST00000481928 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
PTMA-212ENST00000481928 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
PTMA-212ENST00000481928 KIF27Q86VH2 1401 aa27.91■■■□□ 2.06
PTMA-212ENST00000481928 EEA1Q15075 1411 aa27.88■■■□□ 2.05
PTMA-212ENST00000481928 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
PTMA-212ENST00000481928 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
PTMA-212ENST00000481928 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
PTMA-212ENST00000481928 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
PTMA-212ENST00000481928 AQRO60306 1485 aaKnown RBP eCLIP27.75■■■□□ 2.034e-20■■■■■ 37.2
PTMA-212ENST00000481928 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
PTMA-212ENST00000481928 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
PTMA-212ENST00000481928 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
PTMA-212ENST00000481928 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.03
PTMA-212ENST00000481928 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
PTMA-212ENST00000481928 IGF1RP08069 1367 aa27.68■■■□□ 2.02
PTMA-212ENST00000481928 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
PTMA-212ENST00000481928 PBRM1Q86U86 1689 aa27.6■■■□□ 2.01
PTMA-212ENST00000481928 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
PTMA-212ENST00000481928 CUL7Q14999 1698 aa27.56■■■□□ 2
PTMA-212ENST00000481928 CARMIL1Q5VZK9 1371 aa27.54■■■□□ 2
PTMA-212ENST00000481928 PRXQ9BXM0 1461 aa27.54■■■□□ 2
PTMA-212ENST00000481928 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
PTMA-212ENST00000481928 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
PTMA-212ENST00000481928 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
PTMA-212ENST00000481928 KIF21BO75037 1637 aa27.46■■□□□ 1.99
PTMA-212ENST00000481928 RAPGEF2Q9Y4G8 1499 aa27.45■■□□□ 1.99
PTMA-212ENST00000481928 SYNJ2O15056 1496 aa27.44■■□□□ 1.98
PTMA-212ENST00000481928 GOLGA3Q08378 1498 aa27.38■■□□□ 1.97
PTMA-212ENST00000481928 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
PTMA-212ENST00000481928 GRIN2AQ12879 1464 aa27.34■■□□□ 1.97
PTMA-212ENST00000481928 FBLN2P98095 1184 aa27.29■■□□□ 1.96
PTMA-212ENST00000481928 UBTFP17480 764 aaKnown RBP27.22■■□□□ 1.95
PTMA-212ENST00000481928 NUP160Q12769 1436 aa27.2■■□□□ 1.95
PTMA-212ENST00000481928 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
PTMA-212ENST00000481928 CHD1O14646 1710 aa27.19■■□□□ 1.94
PTMA-212ENST00000481928 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
PTMA-212ENST00000481928 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms