RNA–Protein interactions for RNA: ENST00000540708.5

ARL6IP4-218, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

TSL 2

Gene ARL6IP4, Length 1,782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-218ENST00000540708 NISCHQ9Y2I1 1504 aa55.92■■■■■ 6.54
ARL6IP4-218ENST00000540708 CCDC180Q9P1Z9 1646 aa48.71■■■■■ 5.39
ARL6IP4-218ENST00000540708 ZCCHC6Q5VYS8 1495 aaKnown RBP47■■■■■ 5.11
ARL6IP4-218ENST00000540708 DCAF1Q9Y4B6 1507 aa46.26■■■■■ 5
ARL6IP4-218ENST00000540708 DCAF8L2P0C7V8 631 aa46.17■■■■■ 4.98
ARL6IP4-218ENST00000540708 ABCC9O60706 1549 aa45.94■■■■■ 4.94
ARL6IP4-218ENST00000540708 SHROOM4Q9ULL8 1493 aa45.71■■■■■ 4.91
ARL6IP4-218ENST00000540708 MYO15BQ96JP2 1530 aa45.67■■■■■ 4.9
ARL6IP4-218ENST00000540708 NACADO15069 1562 aa45.35■■■■■ 4.85
ARL6IP4-218ENST00000540708 RB1CC1Q8TDY2 1594 aa44.93■■■■■ 4.78
ARL6IP4-218ENST00000540708 SCRIBQ14160 1630 aa44.81■■■■■ 4.76
ARL6IP4-218ENST00000540708 SUPT5HO00267 1087 aaKnown RBP44.07■■■■■ 4.65
ARL6IP4-218ENST00000540708 UNC13AQ9UPW8 1703 aa43.98■■■■■ 4.63
ARL6IP4-218ENST00000540708 BICRAQ9NZM4 1560 aa43.54■■■■■ 4.56
ARL6IP4-218ENST00000540708 RSF1Q96T23 1441 aaPredicted RBP43.43■■■■■ 4.54
ARL6IP4-218ENST00000540708 CECR2Q9BXF3 1484 aa43.43■■■■■ 4.54
ARL6IP4-218ENST00000540708 PABPN1Q86U42 306 aaKnown RBP eCLIP43.35■■■■■ 4.537e-8■■■■□ 20.2
ARL6IP4-218ENST00000540708 MROH2BQ7Z745 1585 aa43.2■■■■■ 4.51
ARL6IP4-218ENST00000540708 BAZ1AQ9NRL2 1556 aaPredicted RBP43.19■■■■■ 4.51
ARL6IP4-218ENST00000540708 SMARCA4P51532 1647 aa42.96■■■■■ 4.47
ARL6IP4-218ENST00000540708 WIZO95785 1651 aa42.86■■■■■ 4.45
ARL6IP4-218ENST00000540708 TOP2AP11388 1531 aaKnown RBP42.44■■■■■ 4.38
ARL6IP4-218ENST00000540708 PEG3Q9GZU2 1588 aa42.43■■■■■ 4.38
ARL6IP4-218ENST00000540708 CHIC1Q5VXU3 224 aa42.25■■■■■ 4.35
ARL6IP4-218ENST00000540708 EIF4G1Q04637 1599 aaKnown RBP42.23■■■■■ 4.35
ARL6IP4-218ENST00000540708 ATAD2BQ9ULI0 1458 aa42.23■■■■■ 4.35
ARL6IP4-218ENST00000540708 SMARCA2P51531 1590 aa42.23■■■■■ 4.35
ARL6IP4-218ENST00000540708 BAZ1BQ9UIG0 1483 aaKnown RBP42.01■■■■■ 4.32
ARL6IP4-218ENST00000540708 CCDC88BA6NC98 1476 aa42■■■■■ 4.31
ARL6IP4-218ENST00000540708 NCAPD3P42695 1498 aa41.85■■■■■ 4.29
ARL6IP4-218ENST00000540708 HMGXB3Q12766 1538 aa41.8■■■■■ 4.28
ARL6IP4-218ENST00000540708 CC2D2AQ9P2K1 1620 aa41.58■■■■■ 4.25
ARL6IP4-218ENST00000540708 TRIM41Q8WV44 630 aa41.45■■■■■ 4.23
ARL6IP4-218ENST00000540708 ABCC8Q09428 1581 aa41.14■■■■■ 4.18
ARL6IP4-218ENST00000540708 CFTRP13569 1480 aa40.96■■■■■ 4.15
ARL6IP4-218ENST00000540708 WRNQ14191 1432 aaPredicted RBP eCLIP40.9■■■■■ 4.14
ARL6IP4-218ENST00000540708 CADPSQ9ULU8 1353 aa40.8■■■■■ 4.12
ARL6IP4-218ENST00000540708 PRDM2Q13029 1718 aa40.74■■■■■ 4.11
ARL6IP4-218ENST00000540708 SYNJ1O43426 1573 aa40.7■■■■■ 4.11
ARL6IP4-218ENST00000540708 FAM9AQ8IZU1 332 aaPredicted RBP40.67■■■■■ 4.1
ARL6IP4-218ENST00000540708 LOC105371045A0A1W2PR82 267 aa40.62■■■■■ 4.09
ARL6IP4-218ENST00000540708 TOP2BQ02880 1626 aa40.55■■■■■ 4.08
ARL6IP4-218ENST00000540708 BIVM-ERCC5R4GMW8 1640 aa40.49■■■■■ 4.07
ARL6IP4-218ENST00000540708 DNAJC5BQ9UF47 199 aa40.43■■■■■ 4.06
ARL6IP4-218ENST00000540708 EEA1Q15075 1411 aa40.41■■■■■ 4.06
ARL6IP4-218ENST00000540708 LAMC3Q9Y6N6 1575 aa40.41■■■■■ 4.06
ARL6IP4-218ENST00000540708 SOGA1O94964 1423 aa40.41■■■■■ 4.06
ARL6IP4-218ENST00000540708 CUX1P39880 1505 aa40.39■■■■■ 4.06
ARL6IP4-218ENST00000540708 NESP48681 1621 aa40.36■■■■■ 4.05
ARL6IP4-218ENST00000540708 FANCD2Q9BXW9 1451 aa40.34■■■■■ 4.05
ARL6IP4-218ENST00000540708 RUSC2Q8N2Y8 1516 aa40.24■■■■■ 4.03
ARL6IP4-218ENST00000540708 CSRNP3Q8WYN3 585 aa40.16■■■■■ 4.02
ARL6IP4-218ENST00000540708 PDS5BQ9NTI5 1447 aa40.11■■■■■ 4.01
ARL6IP4-218ENST00000540708 CEP164Q9UPV0 1460 aa40.09■■■■■ 4.01
ARL6IP4-218ENST00000540708 EHMT2Q96KQ7 1210 aa40.07■■■■■ 4.01
ARL6IP4-218ENST00000540708 DNMBPQ6XZF7 1577 aa40.01■■■■□ 3.99
ARL6IP4-218ENST00000540708 FGD5Q6ZNL6 1462 aa39.94■■■■□ 3.98
ARL6IP4-218ENST00000540708 TOPBP1Q92547 1522 aa39.91■■■■□ 3.98
ARL6IP4-218ENST00000540708 KIF21AQ7Z4S6 1674 aa39.87■■■■□ 3.97
ARL6IP4-218ENST00000540708 KIF27Q86VH2 1401 aa39.87■■■■□ 3.97
ARL6IP4-218ENST00000540708 KIF21BO75037 1637 aa39.85■■■■□ 3.97
ARL6IP4-218ENST00000540708 GOLGA3Q08378 1498 aa39.85■■■■□ 3.97
ARL6IP4-218ENST00000540708 URB2Q14146 1524 aaKnown RBP39.82■■■■□ 3.96
ARL6IP4-218ENST00000540708 TNIKQ9UKE5 1360 aa39.74■■■■□ 3.95
ARL6IP4-218ENST00000540708 POLA1P09884 1462 aaPredicted RBP39.73■■■■□ 3.95
ARL6IP4-218ENST00000540708 CUX2O14529 1486 aa39.72■■■■□ 3.95
ARL6IP4-218ENST00000540708 UBTFP17480 764 aaKnown RBP39.67■■■■□ 3.94
ARL6IP4-218ENST00000540708 PRXQ9BXM0 1461 aa39.61■■■■□ 3.93
ARL6IP4-218ENST00000540708 ABCA10Q8WWZ4 1543 aa39.59■■■■□ 3.93
ARL6IP4-218ENST00000540708 RAD54L2Q9Y4B4 1467 aa39.59■■■■□ 3.93
ARL6IP4-218ENST00000540708 RAPGEF2Q9Y4G8 1499 aa39.58■■■■□ 3.93
ARL6IP4-218ENST00000540708 MRC2Q9UBG0 1479 aa39.58■■■■□ 3.93
ARL6IP4-218ENST00000540708 ERICH3Q5RHP9 1530 aa39.57■■■■□ 3.93
ARL6IP4-218ENST00000540708 CEP162Q5TB80 1403 aa39.53■■■■□ 3.92
ARL6IP4-218ENST00000540708 IGF1RP08069 1367 aa39.48■■■■□ 3.91
ARL6IP4-218ENST00000540708 WDR97A6NE52 1622 aa39.43■■■■□ 3.9
ARL6IP4-218ENST00000540708 ERCC6Q03468 1493 aa39.4■■■■□ 3.9
ARL6IP4-218ENST00000540708 WDR62O43379 1518 aa39.35■■■■□ 3.89
ARL6IP4-218ENST00000540708 CARMIL1Q5VZK9 1371 aa39.3■■■■□ 3.88
ARL6IP4-218ENST00000540708 TARBP1Q13395 1621 aaKnown RBP39.29■■■■□ 3.88
ARL6IP4-218ENST00000540708 ABCA5Q8WWZ7 1642 aa39.25■■■■□ 3.87
ARL6IP4-218ENST00000540708 TDRD9Q8NDG6 1382 aaKnown RBP39.2■■■■□ 3.87
ARL6IP4-218ENST00000540708 CLIP1P30622 1438 aa39.2■■■■□ 3.87
ARL6IP4-218ENST00000540708 GAPVD1Q14C86 1478 aa39.19■■■■□ 3.86
ARL6IP4-218ENST00000540708 CUL7Q14999 1698 aa39.18■■■■□ 3.86
ARL6IP4-218ENST00000540708 THOC2Q8NI27 1593 aaKnown RBP39.18■■■■□ 3.86
ARL6IP4-218ENST00000540708 IFT140Q96RY7 1462 aa39.12■■■■□ 3.85
ARL6IP4-218ENST00000540708 RANGAP1P46060 587 aaPredicted RBP38.96■■■■□ 3.83
ARL6IP4-218ENST00000540708 PBRM1Q86U86 1689 aa38.94■■■■□ 3.82
ARL6IP4-218ENST00000540708 AQRO60306 1485 aaKnown RBP eCLIP38.93■■■■□ 3.824e-7■■■■■ 38.3
ARL6IP4-218ENST00000540708 TRIM26Q12899 539 aaPredicted RBP38.92■■■■□ 3.82
ARL6IP4-218ENST00000540708 PCGF6Q9BYE7 350 aa38.91■■■■□ 3.82
ARL6IP4-218ENST00000540708 VPS8Q8N3P4 1428 aa38.88■■■■□ 3.82
ARL6IP4-218ENST00000540708 GRIN2BQ13224 1484 aa38.87■■■■□ 3.81
ARL6IP4-218ENST00000540708 ZNF608Q9ULD9 1512 aaPredicted RBP38.87■■■■□ 3.81
ARL6IP4-218ENST00000540708 ARAP1Q96P48 1450 aa38.78■■■■□ 3.8
ARL6IP4-218ENST00000540708 FHAD1B1AJZ9 1412 aa38.77■■■■□ 3.8
ARL6IP4-218ENST00000540708 ARHGAP35Q9NRY4 1499 aa38.75■■■■□ 3.79
ARL6IP4-218ENST00000540708 EIF4G3O43432 1585 aaKnown RBP38.74■■■■□ 3.79
ARL6IP4-218ENST00000540708 CTTNBP2Q8WZ74 1663 aa38.74■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms