Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■□□ 17
MATR3P43243 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.88□□□□□ -1.151e-6■■■□□ 17
MATR3P43243 MAP4K4-207ENST00000417294 4251 ntTSL 56.95□□□□□ -1.31e-6■■■□□ 17
MATR3P43243 MREG-204ENST00000439791 576 ntTSL 45.96□□□□□ -1.461e-6■■■□□ 17
MATR3P43243 MREG-203ENST00000424992 560 ntTSL 55.13□□□□□ -1.591e-6■■■□□ 17
MATR3P43243 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.18■□□□□ 0.822e-6■■■□□ 17
MATR3P43243 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.142e-8■■■□□ 16.9
MATR3P43243 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.142e-8■■■□□ 16.9
MATR3P43243 LYN-201ENST00000420292 561 ntTSL 35.95□□□□□ -1.462e-8■■■□□ 16.9
MATR3P43243 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.492e-9■■■□□ 16.9
MATR3P43243 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.072e-9■■■□□ 16.9
MATR3P43243 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.32□□□□□ -0.122e-9■■■□□ 16.9
MATR3P43243 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.32□□□□□ -0.122e-9■■■□□ 16.9
MATR3P43243 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.22e-9■■■□□ 16.9
MATR3P43243 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.78□□□□□ -0.22e-9■■■□□ 16.9
MATR3P43243 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC13.74□□□□□ -0.212e-9■■■□□ 16.9
MATR3P43243 RBM4-210ENST00000528039 764 ntTSL 311.89□□□□□ -0.512e-9■■■□□ 16.9
MATR3P43243 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.23□□□□□ -1.092e-9■■■□□ 16.9
MATR3P43243 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.639e-7■■■□□ 16.9
MATR3P43243 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC10.27□□□□□ -0.779e-7■■■□□ 16.9
MATR3P43243 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.44□□□□□ -0.99e-7■■■□□ 16.9
MATR3P43243 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.49□□□□□ -1.219e-7■■■□□ 16.9
MATR3P43243 SOX5-201ENST00000367206 1816 ntTSL 27.21□□□□□ -1.269e-7■■■□□ 16.9
MATR3P43243 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.092e-7■■■□□ 16.9
MATR3P43243 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.92e-7■■■□□ 16.9
MATR3P43243 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.166e-13■■■□□ 16.9
MATR3P43243 KLHDC4-207ENST00000562155 1757 ntTSL 521.69■■□□□ 1.066e-13■■■□□ 16.9
MATR3P43243 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.036e-13■■■□□ 16.9
MATR3P43243 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.29■■□□□ 16e-13■■■□□ 16.9
MATR3P43243 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.31■□□□□ 0.846e-13■■■□□ 16.9
MATR3P43243 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)19.89■□□□□ 0.776e-13■■■□□ 16.9
MATR3P43243 KLHDC4-217ENST00000566661 2232 ntTSL 519.09■□□□□ 0.656e-13■■■□□ 16.9
MATR3P43243 KLHDC4-218ENST00000567298 4572 ntTSL 517.06■□□□□ 0.326e-13■■■□□ 16.9
MATR3P43243 KLHDC4-208ENST00000562261 1065 ntTSL 316.57■□□□□ 0.246e-13■■■□□ 16.9
MATR3P43243 KLHDC4-212ENST00000564396 563 ntTSL 515.64■□□□□ 0.096e-13■■■□□ 16.9
MATR3P43243 KLHDC4-226ENST00000569747 560 ntTSL 414.83□□□□□ -0.046e-13■■■□□ 16.9
MATR3P43243 KLHDC4-214ENST00000565328 582 ntTSL 414.18□□□□□ -0.146e-13■■■□□ 16.9
MATR3P43243 KLHDC4-213ENST00000564484 562 ntTSL 511.4□□□□□ -0.586e-13■■■□□ 16.9
MATR3P43243 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC9.59□□□□□ -0.876e-13■■■□□ 16.9
MATR3P43243 RBM6-214ENST00000464013 397 ntTSL 55.26□□□□□ -1.579e-7■■■□□ 16.9
MATR3P43243 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.23■■□□□ 1.155e-7■■■□□ 16.9
MATR3P43243 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.885e-7■■■□□ 16.9
MATR3P43243 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)15.82■□□□□ 0.125e-7■■■□□ 16.9
MATR3P43243 PTPRK-222ENST00000532751 563 ntTSL 424.06■■□□□ 1.441e-6■■■□□ 16.9
MATR3P43243 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.46■□□□□ 0.871e-6■■■□□ 16.9
MATR3P43243 PTPRK-208ENST00000392449 1456 ntTSL 218.12■□□□□ 0.491e-6■■■□□ 16.9
MATR3P43243 GALNT1-206ENST00000591924 542 ntTSL 323.99■■□□□ 1.433e-6■■■□□ 16.9
MATR3P43243 GALNT1-202ENST00000586725 272 ntTSL 514.55□□□□□ -0.083e-6■■■□□ 16.9
MATR3P43243 RSF1-208ENST00000530604 520 ntTSL 219.06■□□□□ 0.645e-7■■■□□ 16.9
MATR3P43243 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.481e-13■■■□□ 16.9
MATR3P43243 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.071e-6■■■□□ 16.9
MATR3P43243 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.14■□□□□ 0.985e-7■■■□□ 16.9
MATR3P43243 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.042e-6■■■□□ 16.9
MATR3P43243 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.612e-6■■■□□ 16.9
MATR3P43243 UBR3-204ENST00000430321 5411 ntTSL 56.94□□□□□ -1.32e-6■■■□□ 16.9
MATR3P43243 UBR3-202ENST00000392632 5129 ntTSL 54.73□□□□□ -1.652e-6■■■□□ 16.9
MATR3P43243 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.94■■□□□ 1.12e-8■■■□□ 16.9
MATR3P43243 SNX25-204ENST00000506896 518 ntTSL 221.72■■□□□ 1.072e-8■■■□□ 16.9
MATR3P43243 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.752e-8■■■□□ 16.9
MATR3P43243 ZNF292-203ENST00000369578 1732 ntTSL 218.84■□□□□ 0.615e-7■■■□□ 16.9
MATR3P43243 HMGCL-209ENST00000513148 2011 ntTSL 218.03■□□□□ 0.482e-8■■■□□ 16.9
MATR3P43243 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.7■□□□□ 0.422e-8■■■□□ 16.9
MATR3P43243 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.352e-8■■■□□ 16.9
MATR3P43243 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.2■□□□□ 0.342e-8■■■□□ 16.9
MATR3P43243 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.32e-8■■■□□ 16.9
MATR3P43243 CTNNA1-236ENST00000522792 2044 ntTSL 216.84■□□□□ 0.292e-8■■■□□ 16.9
MATR3P43243 ACTA2-202ENST00000415557 878 ntTSL 316.8■□□□□ 0.282e-8■■■□□ 16.9
MATR3P43243 C2orf48-202ENST00000619640 480 ntTSL 1 (best)16.72■□□□□ 0.272e-8■■■□□ 16.9
MATR3P43243 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.39■□□□□ 0.211e-7■■■□□ 16.9
MATR3P43243 ACTA2-203ENST00000458159 744 ntTSL 315.91■□□□□ 0.142e-8■■■□□ 16.9
MATR3P43243 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.86■□□□□ 0.132e-8■■■□□ 16.9
MATR3P43243 HMGCL-208ENST00000509389 1379 ntTSL 1 (best)15.84■□□□□ 0.132e-8■■■□□ 16.9
MATR3P43243 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.032e-8■■■□□ 16.9
MATR3P43243 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.022e-8■■■□□ 16.9
MATR3P43243 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.062e-8■■■□□ 16.9
MATR3P43243 RAB5B-203ENST00000546810 589 ntTSL 214.6□□□□□ -0.071e-7■■■□□ 16.9
MATR3P43243 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.252e-8■■■□□ 16.9
MATR3P43243 RAB5B-204ENST00000548068 596 ntTSL 413.48□□□□□ -0.251e-7■■■□□ 16.9
MATR3P43243 HMGCL-202ENST00000374487 2151 ntTSL 213.16□□□□□ -0.32e-8■■■□□ 16.9
MATR3P43243 CEP63-216ENST00000620544 1601 ntTSL 5 BASIC13.13□□□□□ -0.312e-8■■■□□ 16.9
MATR3P43243 HMGCL-204ENST00000436439 1354 ntTSL 2 BASIC11.75□□□□□ -0.532e-8■■■□□ 16.9
MATR3P43243 HMGCL-201ENST00000235958 1101 ntTSL 511.13□□□□□ -0.632e-8■■■□□ 16.9
MATR3P43243 CEP63-203ENST00000354446 1835 ntTSL 2 BASIC11.12□□□□□ -0.632e-8■■■□□ 16.9
MATR3P43243 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.662e-8■■■□□ 16.9
MATR3P43243 RAB5B-206ENST00000549505 3148 ntTSL 1 (best)10.59□□□□□ -0.711e-7■■■□□ 16.9
MATR3P43243 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC10.46□□□□□ -0.732e-8■■■□□ 16.9
MATR3P43243 CTNNA1-223ENST00000520520 484 ntTSL 39.38□□□□□ -0.912e-8■■■□□ 16.9
MATR3P43243 CEP63-208ENST00000510625 2151 ntTSL 29.07□□□□□ -0.962e-8■■■□□ 16.9
MATR3P43243 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.961e-7■■■□□ 16.9
MATR3P43243 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.121e-7■■■□□ 16.9
MATR3P43243 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.93□□□□□ -1.142e-6■■■□□ 16.9
MATR3P43243 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.77□□□□□ -1.172e-8■■■□□ 16.9
MATR3P43243 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.192e-8■■■□□ 16.9
MATR3P43243 HMGCL-206ENST00000496907 858 ntTSL 36.64□□□□□ -1.352e-8■■■□□ 16.9
MATR3P43243 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.47□□□□□ -1.372e-6■■■□□ 16.9
MATR3P43243 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.14□□□□□ -1.432e-6■■■□□ 16.9
MATR3P43243 RAB5B-209ENST00000551459 569 ntTSL 46.13□□□□□ -1.431e-7■■■□□ 16.9
MATR3P43243 CEP63-207ENST00000508778 464 ntTSL 34.92□□□□□ -1.622e-8■■■□□ 16.9
MATR3P43243 RAB5B-207ENST00000549915 494 ntTSL 44.1□□□□□ -1.751e-7■■■□□ 16.9
MATR3P43243 TANK-218ENST00000468831 905 ntTSL 1 (best)3.32□□□□□ -1.883e-12■■■□□ 16.9
Retrieved 100 of 16,209 protein–RNA pairs in 128.6 ms