RNA–Protein interactions for RNA: ENST00000565328.5

KLHDC4-214, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-214ENST00000565328 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
KLHDC4-214ENST00000565328 ABCC9O60706 1549 aa31.21■■■□□ 2.59
KLHDC4-214ENST00000565328 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
KLHDC4-214ENST00000565328 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
KLHDC4-214ENST00000565328 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
KLHDC4-214ENST00000565328 NACADO15069 1562 aa28.96■■■□□ 2.23
KLHDC4-214ENST00000565328 PABPN1Q86U42 306 aaKnown RBP eCLIP28.94■■■□□ 2.22
KLHDC4-214ENST00000565328 UNC13AQ9UPW8 1703 aa28.84■■■□□ 2.21
KLHDC4-214ENST00000565328 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
KLHDC4-214ENST00000565328 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
KLHDC4-214ENST00000565328 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
KLHDC4-214ENST00000565328 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
KLHDC4-214ENST00000565328 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
KLHDC4-214ENST00000565328 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
KLHDC4-214ENST00000565328 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
KLHDC4-214ENST00000565328 SCRIBQ14160 1630 aa27.87■■■□□ 2.05
KLHDC4-214ENST00000565328 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
KLHDC4-214ENST00000565328 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
KLHDC4-214ENST00000565328 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
KLHDC4-214ENST00000565328 CUX2O14529 1486 aa27.06■■□□□ 1.92
KLHDC4-214ENST00000565328 ERCC6Q03468 1493 aa26.99■■□□□ 1.91
KLHDC4-214ENST00000565328 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
KLHDC4-214ENST00000565328 NESP48681 1621 aa26.63■■□□□ 1.85
KLHDC4-214ENST00000565328 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
KLHDC4-214ENST00000565328 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
KLHDC4-214ENST00000565328 THOC2Q8NI27 1593 aaKnown RBP26.49■■□□□ 1.83
KLHDC4-214ENST00000565328 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
KLHDC4-214ENST00000565328 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
KLHDC4-214ENST00000565328 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
KLHDC4-214ENST00000565328 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
KLHDC4-214ENST00000565328 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
KLHDC4-214ENST00000565328 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
KLHDC4-214ENST00000565328 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
KLHDC4-214ENST00000565328 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
KLHDC4-214ENST00000565328 PDS5BQ9NTI5 1447 aa26.1■■□□□ 1.77
KLHDC4-214ENST00000565328 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
KLHDC4-214ENST00000565328 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
KLHDC4-214ENST00000565328 WDR62O43379 1518 aa25.92■■□□□ 1.74
KLHDC4-214ENST00000565328 CADPSQ9ULU8 1353 aa25.88■■□□□ 1.73
KLHDC4-214ENST00000565328 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
KLHDC4-214ENST00000565328 OSCARQ8IYS5 282 aa25.71■■□□□ 1.71
KLHDC4-214ENST00000565328 WIZO95785 1651 aa25.7■■□□□ 1.7
KLHDC4-214ENST00000565328 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
KLHDC4-214ENST00000565328 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
KLHDC4-214ENST00000565328 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
KLHDC4-214ENST00000565328 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
KLHDC4-214ENST00000565328 URB2Q14146 1524 aaKnown RBP25.5■■□□□ 1.67
KLHDC4-214ENST00000565328 CFTRP13569 1480 aa25.46■■□□□ 1.67
KLHDC4-214ENST00000565328 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
KLHDC4-214ENST00000565328 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
KLHDC4-214ENST00000565328 PRDM2Q13029 1718 aa25.3■■□□□ 1.64
KLHDC4-214ENST00000565328 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
KLHDC4-214ENST00000565328 CYB5RLQ6IPT4 315 aa25.22■■□□□ 1.63
KLHDC4-214ENST00000565328 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
KLHDC4-214ENST00000565328 TRHP20396 242 aaPredicted RBP25.2■■□□□ 1.62
KLHDC4-214ENST00000565328 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
KLHDC4-214ENST00000565328 CHD1O14646 1710 aa25.16■■□□□ 1.62
KLHDC4-214ENST00000565328 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
KLHDC4-214ENST00000565328 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
KLHDC4-214ENST00000565328 ARAP1Q96P48 1450 aa25.08■■□□□ 1.6
KLHDC4-214ENST00000565328 FBLN2P98095 1184 aa24.99■■□□□ 1.59
KLHDC4-214ENST00000565328 AQRO60306 1485 aaKnown RBP eCLIP24.98■■□□□ 1.59
KLHDC4-214ENST00000565328 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
KLHDC4-214ENST00000565328 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
KLHDC4-214ENST00000565328 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
KLHDC4-214ENST00000565328 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
KLHDC4-214ENST00000565328 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
KLHDC4-214ENST00000565328 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
KLHDC4-214ENST00000565328 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
KLHDC4-214ENST00000565328 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
KLHDC4-214ENST00000565328 TDRD9Q8NDG6 1382 aaKnown RBP24.72■■□□□ 1.55
KLHDC4-214ENST00000565328 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
KLHDC4-214ENST00000565328 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
KLHDC4-214ENST00000565328 SOGA1O94964 1423 aa24.65■■□□□ 1.54
KLHDC4-214ENST00000565328 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
KLHDC4-214ENST00000565328 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.52
KLHDC4-214ENST00000565328 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
KLHDC4-214ENST00000565328 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
KLHDC4-214ENST00000565328 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
KLHDC4-214ENST00000565328 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
KLHDC4-214ENST00000565328 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
KLHDC4-214ENST00000565328 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
KLHDC4-214ENST00000565328 CUX1P39880 1505 aa24.44■■□□□ 1.5
KLHDC4-214ENST00000565328 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
KLHDC4-214ENST00000565328 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
KLHDC4-214ENST00000565328 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
KLHDC4-214ENST00000565328 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
KLHDC4-214ENST00000565328 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
KLHDC4-214ENST00000565328 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.46
KLHDC4-214ENST00000565328 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
KLHDC4-214ENST00000565328 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
KLHDC4-214ENST00000565328 NUP160Q12769 1436 aa24.11■■□□□ 1.45
KLHDC4-214ENST00000565328 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
KLHDC4-214ENST00000565328 PRG4Q92954 1404 aaPredicted RBP23.99■■□□□ 1.43
KLHDC4-214ENST00000565328 FAM69CQ0P6D2 419 aa23.97■■□□□ 1.43
KLHDC4-214ENST00000565328 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
KLHDC4-214ENST00000565328 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
KLHDC4-214ENST00000565328 DIP2BQ9P265 1576 aa23.93■■□□□ 1.42
KLHDC4-214ENST00000565328 TSPOAP1O95153 1857 aa23.92■■□□□ 1.42
KLHDC4-214ENST00000565328 KDM6BO15054 1643 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms