RNA–Protein interactions for RNA: ENST00000567298.5

KLHDC4-218, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 4,572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-218ENST00000567298 NISCHQ9Y2I1 1504 aa24.92■■□□□ 1.58
KLHDC4-218ENST00000567298 DCAF8L2P0C7V8 631 aa24.6■■□□□ 1.53
KLHDC4-218ENST00000567298 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
KLHDC4-218ENST00000567298 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
KLHDC4-218ENST00000567298 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
KLHDC4-218ENST00000567298 SHROOM4Q9ULL8 1493 aa23.39■■□□□ 1.34
KLHDC4-218ENST00000567298 MYT1Q01538 1121 aa23.27■■□□□ 1.32
KLHDC4-218ENST00000567298 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
KLHDC4-218ENST00000567298 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
KLHDC4-218ENST00000567298 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
KLHDC4-218ENST00000567298 HRCP23327 699 aa22.85■■□□□ 1.25
KLHDC4-218ENST00000567298 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
KLHDC4-218ENST00000567298 ERICH6Q7L0X2 663 aa22.66■■□□□ 1.22
KLHDC4-218ENST00000567298 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
KLHDC4-218ENST00000567298 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
KLHDC4-218ENST00000567298 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
KLHDC4-218ENST00000567298 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
KLHDC4-218ENST00000567298 APLP2Q06481 763 aa22.42■■□□□ 1.18
KLHDC4-218ENST00000567298 TRIM26Q12899 539 aaPredicted RBP22.29■■□□□ 1.16
KLHDC4-218ENST00000567298 NEFLP07196 543 aa22.17■■□□□ 1.14
KLHDC4-218ENST00000567298 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
KLHDC4-218ENST00000567298 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
KLHDC4-218ENST00000567298 GTF3C3Q9Y5Q9 886 aa21.87■■□□□ 1.09
KLHDC4-218ENST00000567298 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
KLHDC4-218ENST00000567298 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
KLHDC4-218ENST00000567298 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
KLHDC4-218ENST00000567298 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
KLHDC4-218ENST00000567298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.65■■□□□ 1.06
KLHDC4-218ENST00000567298 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
KLHDC4-218ENST00000567298 ABCC9O60706 1549 aa21.53■■□□□ 1.04
KLHDC4-218ENST00000567298 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
KLHDC4-218ENST00000567298 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
KLHDC4-218ENST00000567298 RTL5Q5HYW3 569 aaPredicted RBP21.38■■□□□ 1.01
KLHDC4-218ENST00000567298 BCANQ96GW7 911 aa21.37■■□□□ 1.01
KLHDC4-218ENST00000567298 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
KLHDC4-218ENST00000567298 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
KLHDC4-218ENST00000567298 ITGAEP38570 1179 aa21.22■□□□□ 0.99
KLHDC4-218ENST00000567298 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
KLHDC4-218ENST00000567298 NEUROD1Q13562 356 aa21.17■□□□□ 0.98
KLHDC4-218ENST00000567298 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
KLHDC4-218ENST00000567298 CNGB1Q14028 1251 aaPredicted RBP21.05■□□□□ 0.96
KLHDC4-218ENST00000567298 POLR3GLQ9BT43 218 aa21.01■□□□□ 0.95
KLHDC4-218ENST00000567298 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
KLHDC4-218ENST00000567298 EIF5BO60841 1220 aaKnown RBP20.82■□□□□ 0.92
KLHDC4-218ENST00000567298 CLSPNQ9HAW4 1339 aa20.76■□□□□ 0.91
KLHDC4-218ENST00000567298 FKBP8Q14318 412 aa20.76■□□□□ 0.91
KLHDC4-218ENST00000567298 ANP32CO43423 234 aa20.74■□□□□ 0.91
KLHDC4-218ENST00000567298 ANP32AP39687 249 aaKnown RBP20.64■□□□□ 0.89
KLHDC4-218ENST00000567298 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
KLHDC4-218ENST00000567298 ZCCHC6Q5VYS8 1495 aaKnown RBP20.63■□□□□ 0.89
KLHDC4-218ENST00000567298 ANP32EQ9BTT0 268 aa20.6■□□□□ 0.89
KLHDC4-218ENST00000567298 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
KLHDC4-218ENST00000567298 MIER1Q8N108 512 aa20.56■□□□□ 0.88
KLHDC4-218ENST00000567298 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
KLHDC4-218ENST00000567298 NBR1Q14596 966 aa20.53■□□□□ 0.88
KLHDC4-218ENST00000567298 NPM2Q86SE8 214 aaKnown RBP20.52■□□□□ 0.88
KLHDC4-218ENST00000567298 FAM50AQ14320 339 aaKnown RBP20.5■□□□□ 0.87
KLHDC4-218ENST00000567298 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
KLHDC4-218ENST00000567298 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
KLHDC4-218ENST00000567298 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
KLHDC4-218ENST00000567298 GLIPR1L2Q4G1C9 344 aa20.37■□□□□ 0.85
KLHDC4-218ENST00000567298 HNRNPUQ00839 825 aaKnown RBP eCLIP20.35■□□□□ 0.85
KLHDC4-218ENST00000567298 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
KLHDC4-218ENST00000567298 ZBTB47Q9UFB7 747 aaPredicted RBP20.31■□□□□ 0.84
KLHDC4-218ENST00000567298 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
KLHDC4-218ENST00000567298 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
KLHDC4-218ENST00000567298 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
KLHDC4-218ENST00000567298 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
KLHDC4-218ENST00000567298 SLC4A1APQ9BWU0 796 aaKnown RBP20.15■□□□□ 0.82
KLHDC4-218ENST00000567298 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
KLHDC4-218ENST00000567298 SUPT16HQ9Y5B9 1047 aaKnown RBP20.13■□□□□ 0.81
KLHDC4-218ENST00000567298 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
KLHDC4-218ENST00000567298 RTN4Q9NQC3 1192 aaKnown RBP20.09■□□□□ 0.81
KLHDC4-218ENST00000567298 RB1CC1Q8TDY2 1594 aa20.07■□□□□ 0.8
KLHDC4-218ENST00000567298 ARXQ96QS3 562 aa20.07■□□□□ 0.8
KLHDC4-218ENST00000567298 CANXP27824 592 aaKnown RBP20.03■□□□□ 0.8
KLHDC4-218ENST00000567298 FBLN2P98095 1184 aa20.03■□□□□ 0.8
KLHDC4-218ENST00000567298 ANP32BQ92688 251 aaKnown RBP19.99■□□□□ 0.79
KLHDC4-218ENST00000567298 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
KLHDC4-218ENST00000567298 NACADO15069 1562 aa19.95■□□□□ 0.78
KLHDC4-218ENST00000567298 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
KLHDC4-218ENST00000567298 TONSLQ96HA7 1378 aa19.94■□□□□ 0.78
KLHDC4-218ENST00000567298 DEKP35659 375 aaKnown RBP19.92■□□□□ 0.78
KLHDC4-218ENST00000567298 RBM19Q9Y4C8 960 aaKnown RBP19.91■□□□□ 0.78
KLHDC4-218ENST00000567298 NEFMP07197 916 aa19.9■□□□□ 0.78
KLHDC4-218ENST00000567298 MRS2Q9HD23 443 aa19.9■□□□□ 0.78
KLHDC4-218ENST00000567298 UPF2Q9HAU5 1272 aaKnown RBP19.86■□□□□ 0.77
KLHDC4-218ENST00000567298 HSP90AA1P07900 732 aaKnown RBP19.86■□□□□ 0.77
KLHDC4-218ENST00000567298 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
KLHDC4-218ENST00000567298 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
KLHDC4-218ENST00000567298 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
KLHDC4-218ENST00000567298 NOP58Q9Y2X3 529 aaKnown RBP19.84■□□□□ 0.77
KLHDC4-218ENST00000567298 LAS1LQ9Y4W2 734 aaKnown RBP19.8■□□□□ 0.76
KLHDC4-218ENST00000567298 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
KLHDC4-218ENST00000567298 ERICH6BQ5W0A0 696 aa19.78■□□□□ 0.76
KLHDC4-218ENST00000567298 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
KLHDC4-218ENST00000567298 ARID3CA6NKF2 412 aa19.73■□□□□ 0.75
KLHDC4-218ENST00000567298 PPP4R2Q9NY27 417 aa19.72■□□□□ 0.75
KLHDC4-218ENST00000567298 DDRGK1Q96HY6 314 aa19.72■□□□□ 0.75
KLHDC4-218ENST00000567298 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms