RNA–Protein interactions for RNA: ENST00000310092.11

RBM4-201, Transcript of RNA binding motif protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM4, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-201ENST00000310092 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
RBM4-201ENST00000310092 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
RBM4-201ENST00000310092 ABCC9O60706 1549 aa25.35■■□□□ 1.65
RBM4-201ENST00000310092 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
RBM4-201ENST00000310092 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
RBM4-201ENST00000310092 SHROOM4Q9ULL8 1493 aa24.63■■□□□ 1.53
RBM4-201ENST00000310092 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
RBM4-201ENST00000310092 NACADO15069 1562 aa24.5■■□□□ 1.51
RBM4-201ENST00000310092 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
RBM4-201ENST00000310092 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
RBM4-201ENST00000310092 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
RBM4-201ENST00000310092 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
RBM4-201ENST00000310092 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
RBM4-201ENST00000310092 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
RBM4-201ENST00000310092 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
RBM4-201ENST00000310092 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
RBM4-201ENST00000310092 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
RBM4-201ENST00000310092 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
RBM4-201ENST00000310092 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
RBM4-201ENST00000310092 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
RBM4-201ENST00000310092 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
RBM4-201ENST00000310092 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
RBM4-201ENST00000310092 WIZO95785 1651 aa23.07■■□□□ 1.28
RBM4-201ENST00000310092 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
RBM4-201ENST00000310092 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.26
RBM4-201ENST00000310092 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
RBM4-201ENST00000310092 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
RBM4-201ENST00000310092 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
RBM4-201ENST00000310092 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
RBM4-201ENST00000310092 NCAPD3P42695 1498 aa22.64■■□□□ 1.22
RBM4-201ENST00000310092 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
RBM4-201ENST00000310092 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
RBM4-201ENST00000310092 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
RBM4-201ENST00000310092 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
RBM4-201ENST00000310092 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
RBM4-201ENST00000310092 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
RBM4-201ENST00000310092 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
RBM4-201ENST00000310092 NESP48681 1621 aa22.01■■□□□ 1.11
RBM4-201ENST00000310092 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
RBM4-201ENST00000310092 EEA1Q15075 1411 aa21.99■■□□□ 1.11
RBM4-201ENST00000310092 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
RBM4-201ENST00000310092 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
RBM4-201ENST00000310092 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
RBM4-201ENST00000310092 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
RBM4-201ENST00000310092 CFTRP13569 1480 aa21.89■■□□□ 1.09
RBM4-201ENST00000310092 BIVM-ERCC5R4GMW8 1640 aa21.89■■□□□ 1.09
RBM4-201ENST00000310092 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
RBM4-201ENST00000310092 SOGA1O94964 1423 aa21.86■■□□□ 1.09
RBM4-201ENST00000310092 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.08
RBM4-201ENST00000310092 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
RBM4-201ENST00000310092 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
RBM4-201ENST00000310092 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
RBM4-201ENST00000310092 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
RBM4-201ENST00000310092 KIF21BO75037 1637 aa21.72■■□□□ 1.07
RBM4-201ENST00000310092 FANCD2Q9BXW9 1451 aa21.7■■□□□ 1.06
RBM4-201ENST00000310092 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
RBM4-201ENST00000310092 CUX1P39880 1505 aa21.68■■□□□ 1.06
RBM4-201ENST00000310092 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
RBM4-201ENST00000310092 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
RBM4-201ENST00000310092 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
RBM4-201ENST00000310092 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
RBM4-201ENST00000310092 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
RBM4-201ENST00000310092 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
RBM4-201ENST00000310092 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
RBM4-201ENST00000310092 MRC2Q9UBG0 1479 aa21.56■■□□□ 1.04
RBM4-201ENST00000310092 CUX2O14529 1486 aa21.53■■□□□ 1.04
RBM4-201ENST00000310092 WDR62O43379 1518 aa21.5■■□□□ 1.03
RBM4-201ENST00000310092 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
RBM4-201ENST00000310092 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
RBM4-201ENST00000310092 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
RBM4-201ENST00000310092 PRXQ9BXM0 1461 aa21.44■■□□□ 1.02
RBM4-201ENST00000310092 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
RBM4-201ENST00000310092 HRCP23327 699 aa21.42■■□□□ 1.02
RBM4-201ENST00000310092 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
RBM4-201ENST00000310092 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
RBM4-201ENST00000310092 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
RBM4-201ENST00000310092 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
RBM4-201ENST00000310092 CLIP1P30622 1438 aa21.3■■□□□ 1
RBM4-201ENST00000310092 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
RBM4-201ENST00000310092 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
RBM4-201ENST00000310092 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
RBM4-201ENST00000310092 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
RBM4-201ENST00000310092 IGF1RP08069 1367 aa21.19■□□□□ 0.98
RBM4-201ENST00000310092 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
RBM4-201ENST00000310092 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.98
RBM4-201ENST00000310092 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
RBM4-201ENST00000310092 CUL7Q14999 1698 aa21.11■□□□□ 0.97
RBM4-201ENST00000310092 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
RBM4-201ENST00000310092 CARMIL1Q5VZK9 1371 aa21.09■□□□□ 0.97
RBM4-201ENST00000310092 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
RBM4-201ENST00000310092 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.96
RBM4-201ENST00000310092 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
RBM4-201ENST00000310092 AQRO60306 1485 aaKnown RBP eCLIP21.02■□□□□ 0.953e-7■■□□□ 13.9
RBM4-201ENST00000310092 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
RBM4-201ENST00000310092 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
RBM4-201ENST00000310092 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
RBM4-201ENST00000310092 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
RBM4-201ENST00000310092 CTTNBP2Q8WZ74 1663 aa20.95■□□□□ 0.94
RBM4-201ENST00000310092 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
RBM4-201ENST00000310092 APLP2Q06481 763 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms