RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
SREBF2-202ENST00000424354 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
SREBF2-202ENST00000424354 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
SREBF2-202ENST00000424354 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
SREBF2-202ENST00000424354 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
SREBF2-202ENST00000424354 ABCC9O60706 1549 aa22.01■■□□□ 1.11
SREBF2-202ENST00000424354 SHROOM4Q9ULL8 1493 aa21.94■■□□□ 1.1
SREBF2-202ENST00000424354 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
SREBF2-202ENST00000424354 NACADO15069 1562 aa21.54■■□□□ 1.04
SREBF2-202ENST00000424354 EHMT2Q96KQ7 1210 aa21.43■■□□□ 1.02
SREBF2-202ENST00000424354 APLP2Q06481 763 aa21.38■■□□□ 1.01
SREBF2-202ENST00000424354 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
SREBF2-202ENST00000424354 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
SREBF2-202ENST00000424354 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
SREBF2-202ENST00000424354 DCAF1Q9Y4B6 1507 aa21.28■■□□□ 1
SREBF2-202ENST00000424354 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
SREBF2-202ENST00000424354 MYT1Q01538 1121 aa21.26■□□□□ 0.99
SREBF2-202ENST00000424354 MYO15BQ96JP2 1530 aa21.26■□□□□ 0.99
SREBF2-202ENST00000424354 ERICH6Q7L0X2 663 aa21.14■□□□□ 0.97
SREBF2-202ENST00000424354 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
SREBF2-202ENST00000424354 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
SREBF2-202ENST00000424354 TTBK1Q5TCY1 1321 aaPredicted RBP20.84■□□□□ 0.93
SREBF2-202ENST00000424354 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.923e-9■□□□□ 10
SREBF2-202ENST00000424354 SCRIBQ14160 1630 aa20.77■□□□□ 0.92
SREBF2-202ENST00000424354 NEFLP07196 543 aa20.72■□□□□ 0.91
SREBF2-202ENST00000424354 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
SREBF2-202ENST00000424354 YTHDC1Q96MU7 727 aaKnown RBP20.55■□□□□ 0.88
SREBF2-202ENST00000424354 HRCP23327 699 aa20.49■□□□□ 0.87
SREBF2-202ENST00000424354 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
SREBF2-202ENST00000424354 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
SREBF2-202ENST00000424354 UBTFP17480 764 aaKnown RBP20.4■□□□□ 0.86
SREBF2-202ENST00000424354 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
SREBF2-202ENST00000424354 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
SREBF2-202ENST00000424354 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
SREBF2-202ENST00000424354 DAXXQ9UER7 740 aaPredicted RBP20.11■□□□□ 0.81
SREBF2-202ENST00000424354 PPARGC1BQ86YN6 1023 aaKnown RBP20.09■□□□□ 0.81
SREBF2-202ENST00000424354 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
SREBF2-202ENST00000424354 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
SREBF2-202ENST00000424354 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
SREBF2-202ENST00000424354 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
SREBF2-202ENST00000424354 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
SREBF2-202ENST00000424354 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
SREBF2-202ENST00000424354 RTL5Q5HYW3 569 aaPredicted RBP19.82■□□□□ 0.76
SREBF2-202ENST00000424354 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
SREBF2-202ENST00000424354 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
SREBF2-202ENST00000424354 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
SREBF2-202ENST00000424354 ITGAEP38570 1179 aa19.76■□□□□ 0.75
SREBF2-202ENST00000424354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
SREBF2-202ENST00000424354 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
SREBF2-202ENST00000424354 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
SREBF2-202ENST00000424354 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
SREBF2-202ENST00000424354 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
SREBF2-202ENST00000424354 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
SREBF2-202ENST00000424354 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
SREBF2-202ENST00000424354 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
SREBF2-202ENST00000424354 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
SREBF2-202ENST00000424354 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
SREBF2-202ENST00000424354 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
SREBF2-202ENST00000424354 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
SREBF2-202ENST00000424354 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
SREBF2-202ENST00000424354 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
SREBF2-202ENST00000424354 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
SREBF2-202ENST00000424354 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
SREBF2-202ENST00000424354 CNGB1Q14028 1251 aaPredicted RBP19.45■□□□□ 0.7
SREBF2-202ENST00000424354 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
SREBF2-202ENST00000424354 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
SREBF2-202ENST00000424354 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
SREBF2-202ENST00000424354 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
SREBF2-202ENST00000424354 BCANQ96GW7 911 aa19.37■□□□□ 0.69
SREBF2-202ENST00000424354 ANP32CO43423 234 aa19.35■□□□□ 0.69
SREBF2-202ENST00000424354 PEG3Q9GZU2 1588 aa19.31■□□□□ 0.68
SREBF2-202ENST00000424354 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
SREBF2-202ENST00000424354 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
SREBF2-202ENST00000424354 WIZO95785 1651 aa19.26■□□□□ 0.67
SREBF2-202ENST00000424354 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
SREBF2-202ENST00000424354 NEUROD1Q13562 356 aa19.22■□□□□ 0.67
SREBF2-202ENST00000424354 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
SREBF2-202ENST00000424354 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
SREBF2-202ENST00000424354 TRIM52Q96A61 297 aa19.19■□□□□ 0.66
SREBF2-202ENST00000424354 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.65
SREBF2-202ENST00000424354 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
SREBF2-202ENST00000424354 FBLN2P98095 1184 aa19.08■□□□□ 0.64
SREBF2-202ENST00000424354 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
SREBF2-202ENST00000424354 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
SREBF2-202ENST00000424354 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
SREBF2-202ENST00000424354 EEA1Q15075 1411 aa19.04■□□□□ 0.64
SREBF2-202ENST00000424354 CFTRP13569 1480 aa19.02■□□□□ 0.64
SREBF2-202ENST00000424354 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
SREBF2-202ENST00000424354 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
SREBF2-202ENST00000424354 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
SREBF2-202ENST00000424354 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
SREBF2-202ENST00000424354 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
SREBF2-202ENST00000424354 FKBP8Q14318 412 aa18.9■□□□□ 0.62
SREBF2-202ENST00000424354 SOGA1O94964 1423 aa18.9■□□□□ 0.62
SREBF2-202ENST00000424354 CUX2O14529 1486 aa18.89■□□□□ 0.62
SREBF2-202ENST00000424354 IFT140Q96RY7 1462 aa18.88■□□□□ 0.61
SREBF2-202ENST00000424354 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
SREBF2-202ENST00000424354 CSRNP3Q8WYN3 585 aa18.87■□□□□ 0.61
SREBF2-202ENST00000424354 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
SREBF2-202ENST00000424354 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms