RNA–Protein interactions for RNA: ENST00000591924.5

GALNT1-206, Transcript of polypeptide N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene GALNT1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT1-206ENST00000591924 NISCHQ9Y2I1 1504 aa55.11■■■■■ 6.41
GALNT1-206ENST00000591924 CCDC180Q9P1Z9 1646 aa49.47■■■■■ 5.51
GALNT1-206ENST00000591924 ABCC9O60706 1549 aa49.3■■■■■ 5.48
GALNT1-206ENST00000591924 RB1CC1Q8TDY2 1594 aa47.02■■■■■ 5.12
GALNT1-206ENST00000591924 NACADO15069 1562 aa46.72■■■■■ 5.07
GALNT1-206ENST00000591924 DCAF8L2P0C7V8 631 aa46.38■■■■■ 5.02
GALNT1-206ENST00000591924 MYO15BQ96JP2 1530 aa46.12■■■■■ 4.97
GALNT1-206ENST00000591924 DNAJC5BQ9UF47 199 aa46.11■■■■■ 4.97
GALNT1-206ENST00000591924 UNC13AQ9UPW8 1703 aa45.97■■■■■ 4.95
GALNT1-206ENST00000591924 PABPN1Q86U42 306 aaKnown RBP eCLIP45.87■■■■■ 4.93
GALNT1-206ENST00000591924 ZCCHC6Q5VYS8 1495 aaKnown RBP45.71■■■■■ 4.91
GALNT1-206ENST00000591924 BICRAQ9NZM4 1560 aa45.62■■■■■ 4.89
GALNT1-206ENST00000591924 DCAF1Q9Y4B6 1507 aa45.56■■■■■ 4.88
GALNT1-206ENST00000591924 SHROOM4Q9ULL8 1493 aa45.07■■■■■ 4.81
GALNT1-206ENST00000591924 SCRIBQ14160 1630 aa45.04■■■■■ 4.8
GALNT1-206ENST00000591924 CC2D2AQ9P2K1 1620 aa44.57■■■■■ 4.73
GALNT1-206ENST00000591924 EIF4G1Q04637 1599 aaKnown RBP44.51■■■■■ 4.72
GALNT1-206ENST00000591924 CECR2Q9BXF3 1484 aa44.41■■■■■ 4.7
GALNT1-206ENST00000591924 NCAPD3P42695 1498 aa43.1■■■■■ 4.49
GALNT1-206ENST00000591924 SMARCA4P51532 1647 aa42.99■■■■■ 4.47
GALNT1-206ENST00000591924 ATAD2BQ9ULI0 1458 aa42.99■■■■■ 4.47
GALNT1-206ENST00000591924 SMARCA2P51531 1590 aa42.9■■■■■ 4.46
GALNT1-206ENST00000591924 HMGXB3Q12766 1538 aa42.82■■■■■ 4.45
GALNT1-206ENST00000591924 BAZ1AQ9NRL2 1556 aaPredicted RBP42.79■■■■■ 4.44
GALNT1-206ENST00000591924 PEG3Q9GZU2 1588 aa42.58■■■■■ 4.41
GALNT1-206ENST00000591924 ERCC6Q03468 1493 aa42.58■■■■■ 4.41
GALNT1-206ENST00000591924 BAZ1BQ9UIG0 1483 aaKnown RBP42.58■■■■■ 4.41
GALNT1-206ENST00000591924 CUX2O14529 1486 aa42.49■■■■■ 4.39
GALNT1-206ENST00000591924 MROH2BQ7Z745 1585 aa42.45■■■■■ 4.39
GALNT1-206ENST00000591924 NESP48681 1621 aa42.38■■■■■ 4.37
GALNT1-206ENST00000591924 DNAJC5Q9H3Z4 198 aa42.29■■■■■ 4.36
GALNT1-206ENST00000591924 LAMC3Q9Y6N6 1575 aa42.14■■■■■ 4.34
GALNT1-206ENST00000591924 THOC2Q8NI27 1593 aaKnown RBP41.98■■■■■ 4.31
GALNT1-206ENST00000591924 WIZO95785 1651 aa41.96■■■■■ 4.31
GALNT1-206ENST00000591924 KIF21AQ7Z4S6 1674 aa41.88■■■■■ 4.29
GALNT1-206ENST00000591924 PDS5BQ9NTI5 1447 aa41.86■■■■■ 4.29
GALNT1-206ENST00000591924 CADPSQ9ULU8 1353 aa41.78■■■■■ 4.28
GALNT1-206ENST00000591924 RSF1Q96T23 1441 aaPredicted RBP41.6■■■■■ 4.25
GALNT1-206ENST00000591924 MRC2Q9UBG0 1479 aa41.52■■■■■ 4.24
GALNT1-206ENST00000591924 TOP2AP11388 1531 aaKnown RBP41.46■■■■■ 4.23
GALNT1-206ENST00000591924 WDR62O43379 1518 aa41.43■■■■■ 4.22
GALNT1-206ENST00000591924 CEP164Q9UPV0 1460 aa41.38■■■■■ 4.21
GALNT1-206ENST00000591924 CFTRP13569 1480 aa41.34■■■■■ 4.21
GALNT1-206ENST00000591924 FANCD2Q9BXW9 1451 aa41.33■■■■■ 4.21
GALNT1-206ENST00000591924 PRDM2Q13029 1718 aa41.01■■■■■ 4.16
GALNT1-206ENST00000591924 URB2Q14146 1524 aaKnown RBP40.98■■■■■ 4.15
GALNT1-206ENST00000591924 CCDC88BA6NC98 1476 aa40.95■■■■■ 4.15
GALNT1-206ENST00000591924 TOPBP1Q92547 1522 aa40.56■■■■■ 4.08
GALNT1-206ENST00000591924 IFT140Q96RY7 1462 aa40.54■■■■■ 4.08
GALNT1-206ENST00000591924 OSCARQ8IYS5 282 aa40.5■■■■■ 4.07
GALNT1-206ENST00000591924 ABCC8Q09428 1581 aa40.48■■■■■ 4.07
GALNT1-206ENST00000591924 TRIM41Q8WV44 630 aa40.47■■■■■ 4.07
GALNT1-206ENST00000591924 ZNF608Q9ULD9 1512 aaPredicted RBP40.44■■■■■ 4.06
GALNT1-206ENST00000591924 DNMBPQ6XZF7 1577 aa40.44■■■■■ 4.06
GALNT1-206ENST00000591924 EIF4G3O43432 1585 aaKnown RBP40.27■■■■■ 4.04
GALNT1-206ENST00000591924 TARBP1Q13395 1621 aaKnown RBP40.2■■■■■ 4.03
GALNT1-206ENST00000591924 POLA1P09884 1462 aaPredicted RBP40.15■■■■■ 4.02
GALNT1-206ENST00000591924 AQRO60306 1485 aaKnown RBP eCLIP40.07■■■■■ 4.01
GALNT1-206ENST00000591924 RIMBP3CA6NJZ7 1639 aa40.02■■■■■ 4
GALNT1-206ENST00000591924 RIMBP3BA6NNM3 1639 aa40.02■■■■■ 4
GALNT1-206ENST00000591924 RIMBP3Q9UFD9 1639 aa40.02■■■■■ 4
GALNT1-206ENST00000591924 RAD54L2Q9Y4B4 1467 aa39.97■■■■□ 3.99
GALNT1-206ENST00000591924 CHD1O14646 1710 aa39.96■■■■□ 3.99
GALNT1-206ENST00000591924 SOGA1O94964 1423 aa39.94■■■■□ 3.98
GALNT1-206ENST00000591924 FGD5Q6ZNL6 1462 aa39.91■■■■□ 3.98
GALNT1-206ENST00000591924 ARHGEF11O15085 1522 aa39.91■■■■□ 3.98
GALNT1-206ENST00000591924 CUX1P39880 1505 aa39.89■■■■□ 3.98
GALNT1-206ENST00000591924 TDRD9Q8NDG6 1382 aaKnown RBP39.84■■■■□ 3.97
GALNT1-206ENST00000591924 WDR97A6NE52 1622 aa39.83■■■■□ 3.97
GALNT1-206ENST00000591924 SUPT5HO00267 1087 aaKnown RBP39.77■■■■□ 3.96
GALNT1-206ENST00000591924 FBLN2P98095 1184 aa39.77■■■■□ 3.96
GALNT1-206ENST00000591924 SNAPC4Q5SXM2 1469 aa39.7■■■■□ 3.95
GALNT1-206ENST00000591924 GRIN2BQ13224 1484 aa39.62■■■■□ 3.93
GALNT1-206ENST00000591924 MAGI1Q96QZ7 1491 aaPredicted RBP39.62■■■■□ 3.93
GALNT1-206ENST00000591924 CYB5RLQ6IPT4 315 aa39.54■■■■□ 3.92
GALNT1-206ENST00000591924 ARAP1Q96P48 1450 aa39.52■■■■□ 3.92
GALNT1-206ENST00000591924 PBRM1Q86U86 1689 aa39.51■■■■□ 3.91
GALNT1-206ENST00000591924 CHMP7Q8WUX9 453 aaPredicted RBP39.5■■■■□ 3.91
GALNT1-206ENST00000591924 CLASP1Q7Z460 1538 aa39.5■■■■□ 3.91
GALNT1-206ENST00000591924 SYNJ1O43426 1573 aa39.48■■■■□ 3.91
GALNT1-206ENST00000591924 SYNJ2O15056 1496 aa39.48■■■■□ 3.91
GALNT1-206ENST00000591924 GAPVD1Q14C86 1478 aa39.48■■■■□ 3.91
GALNT1-206ENST00000591924 ABCA10Q8WWZ4 1543 aa39.47■■■■□ 3.91
GALNT1-206ENST00000591924 ABCA5Q8WWZ7 1642 aa39.43■■■■□ 3.9
GALNT1-206ENST00000591924 WRNQ14191 1432 aaPredicted RBP eCLIP39.31■■■■□ 3.88
GALNT1-206ENST00000591924 BIVM-ERCC5R4GMW8 1640 aa39.31■■■■□ 3.88
GALNT1-206ENST00000591924 TOP2BQ02880 1626 aa39.29■■■■□ 3.88
GALNT1-206ENST00000591924 ADAMTS12P58397 1594 aa39.13■■■■□ 3.85
GALNT1-206ENST00000591924 GRIN2AQ12879 1464 aa39.11■■■■□ 3.85
GALNT1-206ENST00000591924 TRHP20396 242 aaPredicted RBP39.07■■■■□ 3.85
GALNT1-206ENST00000591924 ERICH3Q5RHP9 1530 aa38.99■■■■□ 3.83
GALNT1-206ENST00000591924 FHAD1B1AJZ9 1412 aa38.98■■■■□ 3.83
GALNT1-206ENST00000591924 NUP160Q12769 1436 aa38.97■■■■□ 3.83
GALNT1-206ENST00000591924 CEP170Q5SW79 1584 aa38.97■■■■□ 3.83
GALNT1-206ENST00000591924 ERCC6L2Q5T890 1561 aa38.86■■■■□ 3.81
GALNT1-206ENST00000591924 SHROOM2Q13796 1616 aa38.81■■■■□ 3.8
GALNT1-206ENST00000591924 RUSC2Q8N2Y8 1516 aa38.58■■■■□ 3.77
GALNT1-206ENST00000591924 PRG4Q92954 1404 aaPredicted RBP38.56■■■■□ 3.76
GALNT1-206ENST00000591924 JPH4Q96JJ6 628 aa38.51■■■■□ 3.76
GALNT1-206ENST00000591924 KIF27Q86VH2 1401 aa38.51■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms