RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
CTNNA1-236ENST00000522792 CCDC180Q9P1Z9 1646 aa30.71■■■□□ 2.51
CTNNA1-236ENST00000522792 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
CTNNA1-236ENST00000522792 ABCC9O60706 1549 aa29.23■■■□□ 2.27
CTNNA1-236ENST00000522792 DCAF8L2P0C7V8 631 aa29.21■■■□□ 2.27
CTNNA1-236ENST00000522792 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
CTNNA1-236ENST00000522792 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
CTNNA1-236ENST00000522792 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
CTNNA1-236ENST00000522792 NACADO15069 1562 aa28.62■■■□□ 2.17
CTNNA1-236ENST00000522792 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
CTNNA1-236ENST00000522792 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
CTNNA1-236ENST00000522792 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
CTNNA1-236ENST00000522792 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.05
CTNNA1-236ENST00000522792 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
CTNNA1-236ENST00000522792 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
CTNNA1-236ENST00000522792 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
CTNNA1-236ENST00000522792 PABPN1Q86U42 306 aaKnown RBP eCLIP27.57■■■□□ 2
CTNNA1-236ENST00000522792 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
CTNNA1-236ENST00000522792 RSF1Q96T23 1441 aaPredicted RBP27.28■■□□□ 1.96
CTNNA1-236ENST00000522792 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
CTNNA1-236ENST00000522792 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
CTNNA1-236ENST00000522792 SMARCA4P51532 1647 aa27.1■■□□□ 1.93
CTNNA1-236ENST00000522792 WIZO95785 1651 aa27.02■■□□□ 1.92
CTNNA1-236ENST00000522792 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
CTNNA1-236ENST00000522792 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
CTNNA1-236ENST00000522792 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
CTNNA1-236ENST00000522792 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
CTNNA1-236ENST00000522792 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
CTNNA1-236ENST00000522792 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
CTNNA1-236ENST00000522792 CCDC88BA6NC98 1476 aa26.43■■□□□ 1.82
CTNNA1-236ENST00000522792 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
CTNNA1-236ENST00000522792 CC2D2AQ9P2K1 1620 aa26.42■■□□□ 1.82
CTNNA1-236ENST00000522792 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
CTNNA1-236ENST00000522792 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
CTNNA1-236ENST00000522792 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
CTNNA1-236ENST00000522792 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
CTNNA1-236ENST00000522792 CFTRP13569 1480 aa25.82■■□□□ 1.72
CTNNA1-236ENST00000522792 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
CTNNA1-236ENST00000522792 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
CTNNA1-236ENST00000522792 PRDM2Q13029 1718 aa25.68■■□□□ 1.7
CTNNA1-236ENST00000522792 NESP48681 1621 aa25.63■■□□□ 1.69
CTNNA1-236ENST00000522792 SYNJ1O43426 1573 aa25.62■■□□□ 1.69
CTNNA1-236ENST00000522792 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
CTNNA1-236ENST00000522792 FAM9AQ8IZU1 332 aaPredicted RBP25.53■■□□□ 1.68
CTNNA1-236ENST00000522792 FANCD2Q9BXW9 1451 aa25.5■■□□□ 1.67
CTNNA1-236ENST00000522792 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
CTNNA1-236ENST00000522792 CUX1P39880 1505 aa25.46■■□□□ 1.67
CTNNA1-236ENST00000522792 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.66
CTNNA1-236ENST00000522792 SOGA1O94964 1423 aa25.38■■□□□ 1.65
CTNNA1-236ENST00000522792 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
CTNNA1-236ENST00000522792 PDS5BQ9NTI5 1447 aa25.36■■□□□ 1.65
CTNNA1-236ENST00000522792 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
CTNNA1-236ENST00000522792 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
CTNNA1-236ENST00000522792 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
CTNNA1-236ENST00000522792 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
CTNNA1-236ENST00000522792 EHMT2Q96KQ7 1210 aa25.24■■□□□ 1.63
CTNNA1-236ENST00000522792 EEA1Q15075 1411 aa25.22■■□□□ 1.63
CTNNA1-236ENST00000522792 TOPBP1Q92547 1522 aa25.21■■□□□ 1.63
CTNNA1-236ENST00000522792 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.63
CTNNA1-236ENST00000522792 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
CTNNA1-236ENST00000522792 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
CTNNA1-236ENST00000522792 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.61
CTNNA1-236ENST00000522792 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
CTNNA1-236ENST00000522792 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
CTNNA1-236ENST00000522792 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
CTNNA1-236ENST00000522792 KIF27Q86VH2 1401 aa25.04■■□□□ 1.6
CTNNA1-236ENST00000522792 CUX2O14529 1486 aa25.03■■□□□ 1.6
CTNNA1-236ENST00000522792 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
CTNNA1-236ENST00000522792 KIF21BO75037 1637 aa24.93■■□□□ 1.58
CTNNA1-236ENST00000522792 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
CTNNA1-236ENST00000522792 WDR62O43379 1518 aa24.92■■□□□ 1.58
CTNNA1-236ENST00000522792 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.57
CTNNA1-236ENST00000522792 WDR97A6NE52 1622 aa24.88■■□□□ 1.57
CTNNA1-236ENST00000522792 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
CTNNA1-236ENST00000522792 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
CTNNA1-236ENST00000522792 PRXQ9BXM0 1461 aa24.83■■□□□ 1.57
CTNNA1-236ENST00000522792 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
CTNNA1-236ENST00000522792 IGF1RP08069 1367 aa24.82■■□□□ 1.56
CTNNA1-236ENST00000522792 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
CTNNA1-236ENST00000522792 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
CTNNA1-236ENST00000522792 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
CTNNA1-236ENST00000522792 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
CTNNA1-236ENST00000522792 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
CTNNA1-236ENST00000522792 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
CTNNA1-236ENST00000522792 CEP162Q5TB80 1403 aa24.7■■□□□ 1.55
CTNNA1-236ENST00000522792 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.54
CTNNA1-236ENST00000522792 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.542e-10■■■□□ 16
CTNNA1-236ENST00000522792 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
CTNNA1-236ENST00000522792 CUL7Q14999 1698 aa24.63■■□□□ 1.53
CTNNA1-236ENST00000522792 PBRM1Q86U86 1689 aa24.61■■□□□ 1.53
CTNNA1-236ENST00000522792 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
CTNNA1-236ENST00000522792 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
CTNNA1-236ENST00000522792 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
CTNNA1-236ENST00000522792 CLIP1P30622 1438 aa24.53■■□□□ 1.52
CTNNA1-236ENST00000522792 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
CTNNA1-236ENST00000522792 FHAD1B1AJZ9 1412 aa24.43■■□□□ 1.5
CTNNA1-236ENST00000522792 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
CTNNA1-236ENST00000522792 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
CTNNA1-236ENST00000522792 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
CTNNA1-236ENST00000522792 ARAP1Q96P48 1450 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms