RNA–Protein interactions for RNA: ENST00000622456.4

KLHDC4-227, Transcript of kelch domain containing 4, humanhuman

TSL 5 BASIC

Gene KLHDC4, Length 1,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-227ENST00000622456 NISCHQ9Y2I1 1504 aa44.7■■■■■ 4.75
KLHDC4-227ENST00000622456 CCDC180Q9P1Z9 1646 aa39.52■■■■□ 3.92
KLHDC4-227ENST00000622456 ABCC9O60706 1549 aa38.7■■■■□ 3.79
KLHDC4-227ENST00000622456 DCAF8L2P0C7V8 631 aa37.44■■■■□ 3.58
KLHDC4-227ENST00000622456 ZCCHC6Q5VYS8 1495 aaKnown RBP37.23■■■■□ 3.55
KLHDC4-227ENST00000622456 NACADO15069 1562 aa37.22■■■■□ 3.55
KLHDC4-227ENST00000622456 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
KLHDC4-227ENST00000622456 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
KLHDC4-227ENST00000622456 DCAF1Q9Y4B6 1507 aa36.95■■■■□ 3.51
KLHDC4-227ENST00000622456 PABPN1Q86U42 306 aaKnown RBP eCLIP36.28■■■■□ 3.4
KLHDC4-227ENST00000622456 UNC13AQ9UPW8 1703 aa36.25■■■■□ 3.39
KLHDC4-227ENST00000622456 SCRIBQ14160 1630 aa36.16■■■■□ 3.38
KLHDC4-227ENST00000622456 BICRAQ9NZM4 1560 aa36.09■■■■□ 3.37
KLHDC4-227ENST00000622456 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
KLHDC4-227ENST00000622456 DNAJC5BQ9UF47 199 aa35.49■■■■□ 3.27
KLHDC4-227ENST00000622456 EIF4G1Q04637 1599 aaKnown RBP35.13■■■■□ 3.21
KLHDC4-227ENST00000622456 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.18
KLHDC4-227ENST00000622456 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
KLHDC4-227ENST00000622456 BAZ1AQ9NRL2 1556 aaPredicted RBP34.59■■■■□ 3.13
KLHDC4-227ENST00000622456 SMARCA4P51532 1647 aa34.59■■■■□ 3.13
KLHDC4-227ENST00000622456 MROH2BQ7Z745 1585 aa34.46■■■■□ 3.11
KLHDC4-227ENST00000622456 ATAD2BQ9ULI0 1458 aa34.45■■■■□ 3.11
KLHDC4-227ENST00000622456 NCAPD3P42695 1498 aa34.41■■■■□ 3.1
KLHDC4-227ENST00000622456 SMARCA2P51531 1590 aa34.35■■■■□ 3.09
KLHDC4-227ENST00000622456 PEG3Q9GZU2 1588 aa34.25■■■■□ 3.07
KLHDC4-227ENST00000622456 HMGXB3Q12766 1538 aa34.17■■■■□ 3.06
KLHDC4-227ENST00000622456 RSF1Q96T23 1441 aaPredicted RBP34.16■■■■□ 3.06
KLHDC4-227ENST00000622456 BAZ1BQ9UIG0 1483 aaKnown RBP34.15■■■■□ 3.06
KLHDC4-227ENST00000622456 WIZO95785 1651 aa34.04■■■■□ 3.04
KLHDC4-227ENST00000622456 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
KLHDC4-227ENST00000622456 NESP48681 1621 aa33.53■■■□□ 2.96
KLHDC4-227ENST00000622456 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
KLHDC4-227ENST00000622456 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
KLHDC4-227ENST00000622456 LAMC3Q9Y6N6 1575 aa33.39■■■□□ 2.94
KLHDC4-227ENST00000622456 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
KLHDC4-227ENST00000622456 ERCC6Q03468 1493 aa33.33■■■□□ 2.93
KLHDC4-227ENST00000622456 PDS5BQ9NTI5 1447 aa33.26■■■□□ 2.91
KLHDC4-227ENST00000622456 CFTRP13569 1480 aa33.24■■■□□ 2.91
KLHDC4-227ENST00000622456 FANCD2Q9BXW9 1451 aa33.02■■■□□ 2.88
KLHDC4-227ENST00000622456 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.88
KLHDC4-227ENST00000622456 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
KLHDC4-227ENST00000622456 CUX2O14529 1486 aa32.89■■■□□ 2.86
KLHDC4-227ENST00000622456 THOC2Q8NI27 1593 aaKnown RBP32.88■■■□□ 2.85
KLHDC4-227ENST00000622456 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
KLHDC4-227ENST00000622456 PRDM2Q13029 1718 aa32.78■■■□□ 2.84
KLHDC4-227ENST00000622456 WDR62O43379 1518 aa32.71■■■□□ 2.83
KLHDC4-227ENST00000622456 URB2Q14146 1524 aaKnown RBP32.67■■■□□ 2.82
KLHDC4-227ENST00000622456 TOPBP1Q92547 1522 aa32.5■■■□□ 2.79
KLHDC4-227ENST00000622456 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
KLHDC4-227ENST00000622456 DNMBPQ6XZF7 1577 aa32.42■■■□□ 2.78
KLHDC4-227ENST00000622456 CUX1P39880 1505 aa32.3■■■□□ 2.76
KLHDC4-227ENST00000622456 IFT140Q96RY7 1462 aa32.26■■■□□ 2.75
KLHDC4-227ENST00000622456 POLA1P09884 1462 aaPredicted RBP32.24■■■□□ 2.75
KLHDC4-227ENST00000622456 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.74
KLHDC4-227ENST00000622456 FGD5Q6ZNL6 1462 aa32.17■■■□□ 2.74
KLHDC4-227ENST00000622456 SOGA1O94964 1423 aa32.16■■■□□ 2.74
KLHDC4-227ENST00000622456 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
KLHDC4-227ENST00000622456 ZNF608Q9ULD9 1512 aaPredicted RBP32.11■■■□□ 2.73
KLHDC4-227ENST00000622456 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
KLHDC4-227ENST00000622456 SYNJ1O43426 1573 aa32.03■■■□□ 2.72
KLHDC4-227ENST00000622456 TOP2BQ02880 1626 aa32.03■■■□□ 2.72
KLHDC4-227ENST00000622456 AQRO60306 1485 aaKnown RBP eCLIP31.99■■■□□ 2.711e-8■■■□□ 16.7
KLHDC4-227ENST00000622456 TDRD9Q8NDG6 1382 aaKnown RBP31.98■■■□□ 2.71
KLHDC4-227ENST00000622456 BIVM-ERCC5R4GMW8 1640 aa31.98■■■□□ 2.71
KLHDC4-227ENST00000622456 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
KLHDC4-227ENST00000622456 ABCA10Q8WWZ4 1543 aa31.87■■■□□ 2.69
KLHDC4-227ENST00000622456 DNAJC5Q9H3Z4 198 aa31.83■■■□□ 2.69
KLHDC4-227ENST00000622456 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
KLHDC4-227ENST00000622456 GAPVD1Q14C86 1478 aa31.75■■■□□ 2.67
KLHDC4-227ENST00000622456 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
KLHDC4-227ENST00000622456 OSCARQ8IYS5 282 aa31.68■■■□□ 2.66
KLHDC4-227ENST00000622456 ABCA5Q8WWZ7 1642 aa31.65■■■□□ 2.66
KLHDC4-227ENST00000622456 SNAPC4Q5SXM2 1469 aa31.65■■■□□ 2.66
KLHDC4-227ENST00000622456 FBLN2P98095 1184 aa31.63■■■□□ 2.65
KLHDC4-227ENST00000622456 TRIM41Q8WV44 630 aa31.61■■■□□ 2.65
KLHDC4-227ENST00000622456 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
KLHDC4-227ENST00000622456 CHMP7Q8WUX9 453 aaPredicted RBP31.56■■■□□ 2.64
KLHDC4-227ENST00000622456 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
KLHDC4-227ENST00000622456 KIF27Q86VH2 1401 aa31.5■■■□□ 2.63
KLHDC4-227ENST00000622456 SYNJ2O15056 1496 aa31.49■■■□□ 2.63
KLHDC4-227ENST00000622456 ERICH3Q5RHP9 1530 aa31.47■■■□□ 2.63
KLHDC4-227ENST00000622456 CHD1O14646 1710 aa31.43■■■□□ 2.62
KLHDC4-227ENST00000622456 IGF1RP08069 1367 aa31.42■■■□□ 2.62
KLHDC4-227ENST00000622456 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
KLHDC4-227ENST00000622456 ADAMTS12P58397 1594 aa31.35■■■□□ 2.61
KLHDC4-227ENST00000622456 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
KLHDC4-227ENST00000622456 GRIN2AQ12879 1464 aa31.29■■■□□ 2.6
KLHDC4-227ENST00000622456 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
KLHDC4-227ENST00000622456 CARMIL1Q5VZK9 1371 aa31.22■■■□□ 2.59
KLHDC4-227ENST00000622456 NUP160Q12769 1436 aa31.17■■■□□ 2.58
KLHDC4-227ENST00000622456 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
KLHDC4-227ENST00000622456 CUL7Q14999 1698 aa31.15■■■□□ 2.58
KLHDC4-227ENST00000622456 CEP170Q5SW79 1584 aa31.11■■■□□ 2.57
KLHDC4-227ENST00000622456 ARHGEF11O15085 1522 aa31.06■■■□□ 2.56
KLHDC4-227ENST00000622456 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
KLHDC4-227ENST00000622456 RAPGEF2Q9Y4G8 1499 aa31.01■■■□□ 2.55
KLHDC4-227ENST00000622456 RIMBP3CA6NJZ7 1639 aa31■■■□□ 2.55
KLHDC4-227ENST00000622456 RIMBP3BA6NNM3 1639 aa31■■■□□ 2.55
KLHDC4-227ENST00000622456 RIMBP3Q9UFD9 1639 aa31■■■□□ 2.55
KLHDC4-227ENST00000622456 EEA1Q15075 1411 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms