RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
RAB5B-203ENST00000546810 ABCC9O60706 1549 aa30.63■■■□□ 2.49
RAB5B-203ENST00000546810 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
RAB5B-203ENST00000546810 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
RAB5B-203ENST00000546810 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
RAB5B-203ENST00000546810 NACADO15069 1562 aa28.48■■■□□ 2.15
RAB5B-203ENST00000546810 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
RAB5B-203ENST00000546810 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
RAB5B-203ENST00000546810 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
RAB5B-203ENST00000546810 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
RAB5B-203ENST00000546810 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
RAB5B-203ENST00000546810 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
RAB5B-203ENST00000546810 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
RAB5B-203ENST00000546810 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
RAB5B-203ENST00000546810 DNAJC5Q9H3Z4 198 aa27.43■■□□□ 1.98
RAB5B-203ENST00000546810 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
RAB5B-203ENST00000546810 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.96
RAB5B-203ENST00000546810 ZCCHC6Q5VYS8 1495 aaKnown RBP27.26■■□□□ 1.95
RAB5B-203ENST00000546810 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
RAB5B-203ENST00000546810 CUX2O14529 1486 aa26.67■■□□□ 1.86
RAB5B-203ENST00000546810 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
RAB5B-203ENST00000546810 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
RAB5B-203ENST00000546810 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
RAB5B-203ENST00000546810 NESP48681 1621 aa26.11■■□□□ 1.77
RAB5B-203ENST00000546810 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
RAB5B-203ENST00000546810 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
RAB5B-203ENST00000546810 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
RAB5B-203ENST00000546810 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.75
RAB5B-203ENST00000546810 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
RAB5B-203ENST00000546810 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
RAB5B-203ENST00000546810 LAMC3Q9Y6N6 1575 aa25.81■■□□□ 1.72
RAB5B-203ENST00000546810 PDS5BQ9NTI5 1447 aa25.72■■□□□ 1.71
RAB5B-203ENST00000546810 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
RAB5B-203ENST00000546810 KIF21AQ7Z4S6 1674 aa25.69■■□□□ 1.7
RAB5B-203ENST00000546810 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
RAB5B-203ENST00000546810 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
RAB5B-203ENST00000546810 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
RAB5B-203ENST00000546810 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
RAB5B-203ENST00000546810 WDR62O43379 1518 aa25.47■■□□□ 1.67
RAB5B-203ENST00000546810 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
RAB5B-203ENST00000546810 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
RAB5B-203ENST00000546810 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
RAB5B-203ENST00000546810 WIZO95785 1651 aa25.11■■□□□ 1.61
RAB5B-203ENST00000546810 CFTRP13569 1480 aa25.06■■□□□ 1.6
RAB5B-203ENST00000546810 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
RAB5B-203ENST00000546810 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
RAB5B-203ENST00000546810 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
RAB5B-203ENST00000546810 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
RAB5B-203ENST00000546810 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
RAB5B-203ENST00000546810 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
RAB5B-203ENST00000546810 CYB5RLQ6IPT4 315 aa24.82■■□□□ 1.56
RAB5B-203ENST00000546810 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
RAB5B-203ENST00000546810 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
RAB5B-203ENST00000546810 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
RAB5B-203ENST00000546810 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
RAB5B-203ENST00000546810 PRDM2Q13029 1718 aa24.65■■□□□ 1.54
RAB5B-203ENST00000546810 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
RAB5B-203ENST00000546810 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
RAB5B-203ENST00000546810 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
RAB5B-203ENST00000546810 CHD1O14646 1710 aa24.55■■□□□ 1.52
RAB5B-203ENST00000546810 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
RAB5B-203ENST00000546810 FBLN2P98095 1184 aa24.54■■□□□ 1.52
RAB5B-203ENST00000546810 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
RAB5B-203ENST00000546810 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.529e-10■■■■■ 57.1
RAB5B-203ENST00000546810 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
RAB5B-203ENST00000546810 DNMBPQ6XZF7 1577 aa24.48■■□□□ 1.51
RAB5B-203ENST00000546810 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.5
RAB5B-203ENST00000546810 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
RAB5B-203ENST00000546810 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
RAB5B-203ENST00000546810 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
RAB5B-203ENST00000546810 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
RAB5B-203ENST00000546810 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
RAB5B-203ENST00000546810 SOGA1O94964 1423 aa24.25■■□□□ 1.47
RAB5B-203ENST00000546810 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
RAB5B-203ENST00000546810 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
RAB5B-203ENST00000546810 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
RAB5B-203ENST00000546810 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
RAB5B-203ENST00000546810 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
RAB5B-203ENST00000546810 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
RAB5B-203ENST00000546810 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
RAB5B-203ENST00000546810 SYNJ2O15056 1496 aa24.1■■□□□ 1.45
RAB5B-203ENST00000546810 CUX1P39880 1505 aa23.97■■□□□ 1.43
RAB5B-203ENST00000546810 PBRM1Q86U86 1689 aa23.89■■□□□ 1.42
RAB5B-203ENST00000546810 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
RAB5B-203ENST00000546810 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
RAB5B-203ENST00000546810 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
RAB5B-203ENST00000546810 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
RAB5B-203ENST00000546810 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
RAB5B-203ENST00000546810 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
RAB5B-203ENST00000546810 NUP160Q12769 1436 aa23.74■■□□□ 1.39
RAB5B-203ENST00000546810 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
RAB5B-203ENST00000546810 SHROOM2Q13796 1616 aa23.67■■□□□ 1.38
RAB5B-203ENST00000546810 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
RAB5B-203ENST00000546810 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
RAB5B-203ENST00000546810 FAM69CQ0P6D2 419 aa23.6■■□□□ 1.37
RAB5B-203ENST00000546810 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
RAB5B-203ENST00000546810 PRG4Q92954 1404 aaPredicted RBP23.58■■□□□ 1.36
RAB5B-203ENST00000546810 ABCC10Q5T3U5 1492 aa23.56■■□□□ 1.36
RAB5B-203ENST00000546810 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
RAB5B-203ENST00000546810 ILDR1Q86SU0 546 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms