RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
RAB5B-201ENST00000360299 NISCHQ9Y2I1 1504 aa13.28□□□□□ -0.28
RAB5B-201ENST00000360299 SHROOM4Q9ULL8 1493 aa11.98□□□□□ -0.49
RAB5B-201ENST00000360299 ABCC9O60706 1549 aa11.97□□□□□ -0.49
RAB5B-201ENST00000360299 SUPT5HO00267 1087 aaKnown RBP11.78□□□□□ -0.52
RAB5B-201ENST00000360299 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
RAB5B-201ENST00000360299 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
RAB5B-201ENST00000360299 FAM9AQ8IZU1 332 aaPredicted RBP11.38□□□□□ -0.59
RAB5B-201ENST00000360299 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
RAB5B-201ENST00000360299 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
RAB5B-201ENST00000360299 RANGAP1P46060 587 aaPredicted RBP11.2□□□□□ -0.62
RAB5B-201ENST00000360299 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-201ENST00000360299 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
RAB5B-201ENST00000360299 FBLN2P98095 1184 aa11.07□□□□□ -0.64
RAB5B-201ENST00000360299 RB1CC1Q8TDY2 1594 aa11.02□□□□□ -0.65
RAB5B-201ENST00000360299 APLP2Q06481 763 aa11.01□□□□□ -0.65
RAB5B-201ENST00000360299 SCRIBQ14160 1630 aa11□□□□□ -0.65
RAB5B-201ENST00000360299 TRIM41Q8WV44 630 aa10.97□□□□□ -0.65
RAB5B-201ENST00000360299 MYT1LQ9UL68 1186 aa10.96□□□□□ -0.65
RAB5B-201ENST00000360299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.66
RAB5B-201ENST00000360299 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.66
RAB5B-201ENST00000360299 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
RAB5B-201ENST00000360299 DCAF1Q9Y4B6 1507 aa10.86□□□□□ -0.67
RAB5B-201ENST00000360299 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
RAB5B-201ENST00000360299 NACADO15069 1562 aa10.79□□□□□ -0.68
RAB5B-201ENST00000360299 CHIC1Q5VXU3 224 aa10.72□□□□□ -0.69
RAB5B-201ENST00000360299 ZEB1P37275 1124 aaPredicted RBP10.69□□□□□ -0.7
RAB5B-201ENST00000360299 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
RAB5B-201ENST00000360299 PCGF6Q9BYE7 350 aa10.68□□□□□ -0.7
RAB5B-201ENST00000360299 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
RAB5B-201ENST00000360299 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
RAB5B-201ENST00000360299 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
RAB5B-201ENST00000360299 CHMP7Q8WUX9 453 aaPredicted RBP10.59□□□□□ -0.71
RAB5B-201ENST00000360299 CECR2Q9BXF3 1484 aa10.59□□□□□ -0.71
RAB5B-201ENST00000360299 ARID3CA6NKF2 412 aa10.58□□□□□ -0.72
RAB5B-201ENST00000360299 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.72
RAB5B-201ENST00000360299 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.73
RAB5B-201ENST00000360299 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
RAB5B-201ENST00000360299 TRIM26Q12899 539 aaPredicted RBP10.5□□□□□ -0.73
RAB5B-201ENST00000360299 RSF1Q96T23 1441 aaPredicted RBP10.49□□□□□ -0.73
RAB5B-201ENST00000360299 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
RAB5B-201ENST00000360299 ESF1Q9H501 851 aaKnown RBP10.44□□□□□ -0.74
RAB5B-201ENST00000360299 ITGAEP38570 1179 aa10.42□□□□□ -0.74
RAB5B-201ENST00000360299 DNAJC5BQ9UF47 199 aa10.41□□□□□ -0.74
RAB5B-201ENST00000360299 LOC105371045A0A1W2PR82 267 aa10.41□□□□□ -0.74
RAB5B-201ENST00000360299 PPARGC1BQ86YN6 1023 aaKnown RBP10.37□□□□□ -0.75
RAB5B-201ENST00000360299 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
RAB5B-201ENST00000360299 BCANQ96GW7 911 aa10.35□□□□□ -0.75
RAB5B-201ENST00000360299 PDS5BQ9NTI5 1447 aa10.35□□□□□ -0.75
RAB5B-201ENST00000360299 CENPBP07199 599 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-201ENST00000360299 AEBP2Q6ZN18 517 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-201ENST00000360299 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
RAB5B-201ENST00000360299 WIZO95785 1651 aa10.31□□□□□ -0.76
RAB5B-201ENST00000360299 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
RAB5B-201ENST00000360299 ARID4BQ4LE39 1312 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-201ENST00000360299 BAZ1AQ9NRL2 1556 aaPredicted RBP10.27□□□□□ -0.77
RAB5B-201ENST00000360299 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
RAB5B-201ENST00000360299 UNC13AQ9UPW8 1703 aa10.26□□□□□ -0.77
RAB5B-201ENST00000360299 CYB5RLQ6IPT4 315 aa10.25□□□□□ -0.77
RAB5B-201ENST00000360299 SMARCA2P51531 1590 aa10.25□□□□□ -0.77
RAB5B-201ENST00000360299 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
RAB5B-201ENST00000360299 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
RAB5B-201ENST00000360299 HRCP23327 699 aa10.24□□□□□ -0.77
RAB5B-201ENST00000360299 FAM50AQ14320 339 aaKnown RBP10.24□□□□□ -0.77
RAB5B-201ENST00000360299 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
RAB5B-201ENST00000360299 SLC4A1APQ9BWU0 796 aaKnown RBP10.17□□□□□ -0.78
RAB5B-201ENST00000360299 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
RAB5B-201ENST00000360299 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.78
RAB5B-201ENST00000360299 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
RAB5B-201ENST00000360299 SMARCA4P51532 1647 aa10.14□□□□□ -0.79
RAB5B-201ENST00000360299 CC2D2AQ9P2K1 1620 aa10.14□□□□□ -0.79
RAB5B-201ENST00000360299 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
RAB5B-201ENST00000360299 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
RAB5B-201ENST00000360299 ATAD2BQ9ULI0 1458 aa10.12□□□□□ -0.79
RAB5B-201ENST00000360299 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
RAB5B-201ENST00000360299 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
RAB5B-201ENST00000360299 POLR3GLQ9BT43 218 aa10.1□□□□□ -0.79
RAB5B-201ENST00000360299 TOP2AP11388 1531 aaKnown RBP10.09□□□□□ -0.79
RAB5B-201ENST00000360299 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
RAB5B-201ENST00000360299 MLECQ14165 292 aa10.08□□□□□ -0.8
RAB5B-201ENST00000360299 SOGA1O94964 1423 aa10.08□□□□□ -0.8
RAB5B-201ENST00000360299 NEFLP07196 543 aa10.08□□□□□ -0.8
RAB5B-201ENST00000360299 CCDC88BA6NC98 1476 aa10.08□□□□□ -0.8
RAB5B-201ENST00000360299 WRNQ14191 1432 aaPredicted RBP eCLIP10.06□□□□□ -0.8
RAB5B-201ENST00000360299 EEA1Q15075 1411 aa10.06□□□□□ -0.8
RAB5B-201ENST00000360299 SENP3Q9H4L4 574 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-201ENST00000360299 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
RAB5B-201ENST00000360299 FANCD2Q9BXW9 1451 aa10.04□□□□□ -0.8
RAB5B-201ENST00000360299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.04□□□□□ -0.8
RAB5B-201ENST00000360299 CUX2O14529 1486 aa10.03□□□□□ -0.8
RAB5B-201ENST00000360299 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
RAB5B-201ENST00000360299 KIF27Q86VH2 1401 aa10.02□□□□□ -0.81
RAB5B-201ENST00000360299 C14orf37Q86TY3 774 aa10□□□□□ -0.81
RAB5B-201ENST00000360299 ZNF326Q5BKZ1 582 aaKnown RBP9.99□□□□□ -0.81
RAB5B-201ENST00000360299 NESP48681 1621 aa9.99□□□□□ -0.81
RAB5B-201ENST00000360299 TSPY4P0CV99 314 aa9.97□□□□□ -0.81
RAB5B-201ENST00000360299 TSPY10P0CW01 314 aa9.97□□□□□ -0.81
RAB5B-201ENST00000360299 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-201ENST00000360299 YTHDC1Q96MU7 727 aaKnown RBP9.96□□□□□ -0.82
RAB5B-201ENST00000360299 NCAPD3P42695 1498 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms