RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
KLHDC4-208ENST00000562261 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
KLHDC4-208ENST00000562261 ABCC9O60706 1549 aa33.58■■■□□ 2.97
KLHDC4-208ENST00000562261 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
KLHDC4-208ENST00000562261 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
KLHDC4-208ENST00000562261 NACADO15069 1562 aa31.92■■■□□ 2.7
KLHDC4-208ENST00000562261 DCAF8L2P0C7V8 631 aa31.74■■■□□ 2.67
KLHDC4-208ENST00000562261 MYO15BQ96JP2 1530 aa31.56■■■□□ 2.64
KLHDC4-208ENST00000562261 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
KLHDC4-208ENST00000562261 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
KLHDC4-208ENST00000562261 PABPN1Q86U42 306 aaKnown RBP eCLIP31.26■■■□□ 2.59
KLHDC4-208ENST00000562261 DCAF1Q9Y4B6 1507 aa31.24■■■□□ 2.59
KLHDC4-208ENST00000562261 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
KLHDC4-208ENST00000562261 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
KLHDC4-208ENST00000562261 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
KLHDC4-208ENST00000562261 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
KLHDC4-208ENST00000562261 EIF4G1Q04637 1599 aaKnown RBP30.35■■■□□ 2.45
KLHDC4-208ENST00000562261 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
KLHDC4-208ENST00000562261 DNAJC5Q9H3Z4 198 aa30.07■■■□□ 2.4
KLHDC4-208ENST00000562261 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
KLHDC4-208ENST00000562261 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
KLHDC4-208ENST00000562261 ATAD2BQ9ULI0 1458 aa29.39■■■□□ 2.3
KLHDC4-208ENST00000562261 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
KLHDC4-208ENST00000562261 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
KLHDC4-208ENST00000562261 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
KLHDC4-208ENST00000562261 CUX2O14529 1486 aa29.17■■■□□ 2.26
KLHDC4-208ENST00000562261 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
KLHDC4-208ENST00000562261 BAZ1BQ9UIG0 1483 aaKnown RBP29.12■■■□□ 2.25
KLHDC4-208ENST00000562261 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
KLHDC4-208ENST00000562261 ERCC6Q03468 1493 aa29.05■■■□□ 2.24
KLHDC4-208ENST00000562261 NESP48681 1621 aa28.9■■■□□ 2.22
KLHDC4-208ENST00000562261 WIZO95785 1651 aa28.78■■■□□ 2.2
KLHDC4-208ENST00000562261 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
KLHDC4-208ENST00000562261 THOC2Q8NI27 1593 aaKnown RBP28.6■■■□□ 2.17
KLHDC4-208ENST00000562261 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
KLHDC4-208ENST00000562261 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
KLHDC4-208ENST00000562261 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
KLHDC4-208ENST00000562261 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
KLHDC4-208ENST00000562261 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
KLHDC4-208ENST00000562261 TOP2AP11388 1531 aaKnown RBP28.44■■■□□ 2.14
KLHDC4-208ENST00000562261 MRC2Q9UBG0 1479 aa28.32■■■□□ 2.12
KLHDC4-208ENST00000562261 CFTRP13569 1480 aa28.29■■■□□ 2.12
KLHDC4-208ENST00000562261 WDR62O43379 1518 aa28.26■■■□□ 2.11
KLHDC4-208ENST00000562261 CEP164Q9UPV0 1460 aa28.26■■■□□ 2.11
KLHDC4-208ENST00000562261 FANCD2Q9BXW9 1451 aa28.24■■■□□ 2.11
KLHDC4-208ENST00000562261 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
KLHDC4-208ENST00000562261 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
KLHDC4-208ENST00000562261 URB2Q14146 1524 aaKnown RBP27.99■■■□□ 2.07
KLHDC4-208ENST00000562261 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
KLHDC4-208ENST00000562261 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
KLHDC4-208ENST00000562261 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
KLHDC4-208ENST00000562261 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
KLHDC4-208ENST00000562261 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
KLHDC4-208ENST00000562261 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
KLHDC4-208ENST00000562261 EIF4G3O43432 1585 aaKnown RBP27.49■■□□□ 1.99
KLHDC4-208ENST00000562261 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
KLHDC4-208ENST00000562261 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
KLHDC4-208ENST00000562261 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
KLHDC4-208ENST00000562261 RIMBP3CA6NJZ7 1639 aa27.45■■□□□ 1.99
KLHDC4-208ENST00000562261 RIMBP3BA6NNM3 1639 aa27.45■■□□□ 1.99
KLHDC4-208ENST00000562261 RIMBP3Q9UFD9 1639 aa27.45■■□□□ 1.99
KLHDC4-208ENST00000562261 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.972e-8■■■□□ 18.4
KLHDC4-208ENST00000562261 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
KLHDC4-208ENST00000562261 CUX1P39880 1505 aa27.34■■□□□ 1.97
KLHDC4-208ENST00000562261 SOGA1O94964 1423 aa27.33■■□□□ 1.97
KLHDC4-208ENST00000562261 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
KLHDC4-208ENST00000562261 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
KLHDC4-208ENST00000562261 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
KLHDC4-208ENST00000562261 WDR97A6NE52 1622 aa27.24■■□□□ 1.95
KLHDC4-208ENST00000562261 CHD1O14646 1710 aa27.24■■□□□ 1.95
KLHDC4-208ENST00000562261 TDRD9Q8NDG6 1382 aaKnown RBP27.23■■□□□ 1.95
KLHDC4-208ENST00000562261 TRHP20396 242 aaPredicted RBP27.22■■□□□ 1.95
KLHDC4-208ENST00000562261 FBLN2P98095 1184 aa27.13■■□□□ 1.93
KLHDC4-208ENST00000562261 SNAPC4Q5SXM2 1469 aa27.13■■□□□ 1.93
KLHDC4-208ENST00000562261 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
KLHDC4-208ENST00000562261 MAGI1Q96QZ7 1491 aaPredicted RBP27.07■■□□□ 1.92
KLHDC4-208ENST00000562261 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
KLHDC4-208ENST00000562261 PBRM1Q86U86 1689 aa27.01■■□□□ 1.92
KLHDC4-208ENST00000562261 GAPVD1Q14C86 1478 aa27.01■■□□□ 1.91
KLHDC4-208ENST00000562261 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
KLHDC4-208ENST00000562261 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
KLHDC4-208ENST00000562261 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
KLHDC4-208ENST00000562261 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
KLHDC4-208ENST00000562261 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
KLHDC4-208ENST00000562261 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
KLHDC4-208ENST00000562261 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
KLHDC4-208ENST00000562261 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
KLHDC4-208ENST00000562261 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
KLHDC4-208ENST00000562261 CLASP1Q7Z460 1538 aa26.93■■□□□ 1.9
KLHDC4-208ENST00000562261 ADAMTS12P58397 1594 aa26.77■■□□□ 1.88
KLHDC4-208ENST00000562261 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
KLHDC4-208ENST00000562261 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
KLHDC4-208ENST00000562261 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
KLHDC4-208ENST00000562261 NUP160Q12769 1436 aa26.65■■□□□ 1.86
KLHDC4-208ENST00000562261 CEP170Q5SW79 1584 aa26.64■■□□□ 1.86
KLHDC4-208ENST00000562261 ERCC6L2Q5T890 1561 aa26.51■■□□□ 1.83
KLHDC4-208ENST00000562261 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
KLHDC4-208ENST00000562261 KIF27Q86VH2 1401 aa26.44■■□□□ 1.82
KLHDC4-208ENST00000562261 IGF1RP08069 1367 aa26.39■■□□□ 1.82
KLHDC4-208ENST00000562261 RUSC2Q8N2Y8 1516 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms