RNA–Protein interactions for RNA: ENST00000619640.3

C2orf48-202, Transcript of chromosome 2 open reading frame 48, humanhuman

TSL 1 (best)

Gene C2orf48, Length 480 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48-202ENST00000619640 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
C2orf48-202ENST00000619640 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
C2orf48-202ENST00000619640 ABCC9O60706 1549 aa31.86■■■□□ 2.69
C2orf48-202ENST00000619640 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
C2orf48-202ENST00000619640 NACADO15069 1562 aa30.85■■■□□ 2.53
C2orf48-202ENST00000619640 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
C2orf48-202ENST00000619640 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
C2orf48-202ENST00000619640 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
C2orf48-202ENST00000619640 DCAF8L2P0C7V8 631 aa30.65■■■□□ 2.5
C2orf48-202ENST00000619640 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
C2orf48-202ENST00000619640 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
C2orf48-202ENST00000619640 BICRAQ9NZM4 1560 aa29.91■■■□□ 2.38
C2orf48-202ENST00000619640 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
C2orf48-202ENST00000619640 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
C2orf48-202ENST00000619640 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
C2orf48-202ENST00000619640 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
C2orf48-202ENST00000619640 CC2D2AQ9P2K1 1620 aa28.88■■■□□ 2.21
C2orf48-202ENST00000619640 CECR2Q9BXF3 1484 aa28.81■■■□□ 2.2
C2orf48-202ENST00000619640 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
C2orf48-202ENST00000619640 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
C2orf48-202ENST00000619640 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
C2orf48-202ENST00000619640 ATAD2BQ9ULI0 1458 aa28.49■■■□□ 2.15
C2orf48-202ENST00000619640 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
C2orf48-202ENST00000619640 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
C2orf48-202ENST00000619640 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
C2orf48-202ENST00000619640 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
C2orf48-202ENST00000619640 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
C2orf48-202ENST00000619640 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
C2orf48-202ENST00000619640 WIZO95785 1651 aa28.22■■■□□ 2.11
C2orf48-202ENST00000619640 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
C2orf48-202ENST00000619640 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
C2orf48-202ENST00000619640 NESP48681 1621 aa27.66■■■□□ 2.02
C2orf48-202ENST00000619640 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
C2orf48-202ENST00000619640 CCDC88BA6NC98 1476 aa27.61■■■□□ 2.01
C2orf48-202ENST00000619640 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
C2orf48-202ENST00000619640 CFTRP13569 1480 aa27.53■■■□□ 2
C2orf48-202ENST00000619640 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
C2orf48-202ENST00000619640 ERCC6Q03468 1493 aa27.42■■□□□ 1.98
C2orf48-202ENST00000619640 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
C2orf48-202ENST00000619640 PRDM2Q13029 1718 aa27.33■■□□□ 1.96
C2orf48-202ENST00000619640 FANCD2Q9BXW9 1451 aa27.27■■□□□ 1.96
C2orf48-202ENST00000619640 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.96
C2orf48-202ENST00000619640 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
C2orf48-202ENST00000619640 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
C2orf48-202ENST00000619640 CUX2O14529 1486 aa27.15■■□□□ 1.94
C2orf48-202ENST00000619640 WDR62O43379 1518 aa27.11■■□□□ 1.93
C2orf48-202ENST00000619640 URB2Q14146 1524 aaKnown RBP27.02■■□□□ 1.92
C2orf48-202ENST00000619640 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
C2orf48-202ENST00000619640 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
C2orf48-202ENST00000619640 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
C2orf48-202ENST00000619640 CUX1P39880 1505 aa26.76■■□□□ 1.87
C2orf48-202ENST00000619640 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
C2orf48-202ENST00000619640 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
C2orf48-202ENST00000619640 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
C2orf48-202ENST00000619640 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
C2orf48-202ENST00000619640 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
C2orf48-202ENST00000619640 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
C2orf48-202ENST00000619640 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
C2orf48-202ENST00000619640 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
C2orf48-202ENST00000619640 SOGA1O94964 1423 aa26.52■■□□□ 1.84
C2orf48-202ENST00000619640 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
C2orf48-202ENST00000619640 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
C2orf48-202ENST00000619640 WDR97A6NE52 1622 aa26.45■■□□□ 1.82
C2orf48-202ENST00000619640 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
C2orf48-202ENST00000619640 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
C2orf48-202ENST00000619640 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
C2orf48-202ENST00000619640 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
C2orf48-202ENST00000619640 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
C2orf48-202ENST00000619640 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
C2orf48-202ENST00000619640 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
C2orf48-202ENST00000619640 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
C2orf48-202ENST00000619640 MAGI1Q96QZ7 1491 aaPredicted RBP26.15■■□□□ 1.78
C2orf48-202ENST00000619640 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
C2orf48-202ENST00000619640 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
C2orf48-202ENST00000619640 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
C2orf48-202ENST00000619640 TRIM41Q8WV44 630 aa26.06■■□□□ 1.76
C2orf48-202ENST00000619640 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
C2orf48-202ENST00000619640 CHD1O14646 1710 aa26.04■■□□□ 1.76
C2orf48-202ENST00000619640 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
C2orf48-202ENST00000619640 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
C2orf48-202ENST00000619640 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
C2orf48-202ENST00000619640 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
C2orf48-202ENST00000619640 IGF1RP08069 1367 aa25.95■■□□□ 1.74
C2orf48-202ENST00000619640 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
C2orf48-202ENST00000619640 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
C2orf48-202ENST00000619640 FBLN2P98095 1184 aa25.9■■□□□ 1.74
C2orf48-202ENST00000619640 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
C2orf48-202ENST00000619640 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
C2orf48-202ENST00000619640 CUL7Q14999 1698 aa25.88■■□□□ 1.73
C2orf48-202ENST00000619640 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
C2orf48-202ENST00000619640 NUP160Q12769 1436 aa25.8■■□□□ 1.72
C2orf48-202ENST00000619640 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
C2orf48-202ENST00000619640 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
C2orf48-202ENST00000619640 EEA1Q15075 1411 aa25.71■■□□□ 1.71
C2orf48-202ENST00000619640 PRXQ9BXM0 1461 aa25.66■■□□□ 1.7
C2orf48-202ENST00000619640 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
C2orf48-202ENST00000619640 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
C2orf48-202ENST00000619640 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
C2orf48-202ENST00000619640 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
C2orf48-202ENST00000619640 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms