RNA–Protein interactions for RNA: ENST00000530604.1

RSF1-208, Transcript of remodeling and spacing factor 1, humanhuman

TSL 2

Gene RSF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-208ENST00000530604 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
RSF1-208ENST00000530604 ABCC9O60706 1549 aa39.5■■■■□ 3.91
RSF1-208ENST00000530604 CCDC180Q9P1Z9 1646 aa39.47■■■■□ 3.91
RSF1-208ENST00000530604 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
RSF1-208ENST00000530604 NACADO15069 1562 aa37.34■■■■□ 3.57
RSF1-208ENST00000530604 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
RSF1-208ENST00000530604 DCAF8L2P0C7V8 631 aa37.14■■■■□ 3.54
RSF1-208ENST00000530604 MYO15BQ96JP2 1530 aa36.84■■■■□ 3.49
RSF1-208ENST00000530604 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
RSF1-208ENST00000530604 UNC13AQ9UPW8 1703 aa36.76■■■■□ 3.47
RSF1-208ENST00000530604 BICRAQ9NZM4 1560 aa36.53■■■■□ 3.44
RSF1-208ENST00000530604 ZCCHC6Q5VYS8 1495 aaKnown RBP36.43■■■■□ 3.42
RSF1-208ENST00000530604 DCAF1Q9Y4B6 1507 aa36.34■■■■□ 3.41
RSF1-208ENST00000530604 SHROOM4Q9ULL8 1493 aa36.01■■■■□ 3.36
RSF1-208ENST00000530604 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
RSF1-208ENST00000530604 CC2D2AQ9P2K1 1620 aa35.69■■■■□ 3.3
RSF1-208ENST00000530604 EIF4G1Q04637 1599 aaKnown RBP35.61■■■■□ 3.29
RSF1-208ENST00000530604 CECR2Q9BXF3 1484 aa35.6■■■■□ 3.29
RSF1-208ENST00000530604 NCAPD3P42695 1498 aa34.49■■■■□ 3.11
RSF1-208ENST00000530604 ATAD2BQ9ULI0 1458 aa34.37■■■■□ 3.09
RSF1-208ENST00000530604 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
RSF1-208ENST00000530604 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
RSF1-208ENST00000530604 HMGXB3Q12766 1538 aa34.2■■■■□ 3.07
RSF1-208ENST00000530604 BAZ1AQ9NRL2 1556 aaPredicted RBP34.14■■■■□ 3.06
RSF1-208ENST00000530604 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
RSF1-208ENST00000530604 ERCC6Q03468 1493 aa34.09■■■■□ 3.05
RSF1-208ENST00000530604 CUX2O14529 1486 aa34.07■■■■□ 3.04
RSF1-208ENST00000530604 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.04
RSF1-208ENST00000530604 PEG3Q9GZU2 1588 aa34■■■■□ 3.03
RSF1-208ENST00000530604 NESP48681 1621 aa33.94■■■■□ 3.02
RSF1-208ENST00000530604 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
RSF1-208ENST00000530604 LAMC3Q9Y6N6 1575 aa33.69■■■□□ 2.98
RSF1-208ENST00000530604 THOC2Q8NI27 1593 aaKnown RBP33.59■■■□□ 2.97
RSF1-208ENST00000530604 PDS5BQ9NTI5 1447 aa33.51■■■□□ 2.95
RSF1-208ENST00000530604 WIZO95785 1651 aa33.48■■■□□ 2.95
RSF1-208ENST00000530604 KIF21AQ7Z4S6 1674 aa33.48■■■□□ 2.95
RSF1-208ENST00000530604 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
RSF1-208ENST00000530604 MRC2Q9UBG0 1479 aa33.21■■■□□ 2.91
RSF1-208ENST00000530604 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
RSF1-208ENST00000530604 WDR62O43379 1518 aa33.13■■■□□ 2.89
RSF1-208ENST00000530604 CEP164Q9UPV0 1460 aa33.06■■■□□ 2.88
RSF1-208ENST00000530604 CFTRP13569 1480 aa33.05■■■□□ 2.88
RSF1-208ENST00000530604 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
RSF1-208ENST00000530604 FANCD2Q9BXW9 1451 aa33.04■■■□□ 2.88
RSF1-208ENST00000530604 URB2Q14146 1524 aaKnown RBP32.78■■■□□ 2.84
RSF1-208ENST00000530604 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
RSF1-208ENST00000530604 PRDM2Q13029 1718 aa32.68■■■□□ 2.82
RSF1-208ENST00000530604 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
RSF1-208ENST00000530604 OSCARQ8IYS5 282 aa32.54■■■□□ 2.8
RSF1-208ENST00000530604 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
RSF1-208ENST00000530604 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
RSF1-208ENST00000530604 ZNF608Q9ULD9 1512 aaPredicted RBP32.38■■■□□ 2.77
RSF1-208ENST00000530604 ABCC8Q09428 1581 aa32.35■■■□□ 2.77
RSF1-208ENST00000530604 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
RSF1-208ENST00000530604 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
RSF1-208ENST00000530604 TARBP1Q13395 1621 aaKnown RBP32.14■■■□□ 2.74
RSF1-208ENST00000530604 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
RSF1-208ENST00000530604 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
RSF1-208ENST00000530604 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
RSF1-208ENST00000530604 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.736e-8■■■■■ 31.2
RSF1-208ENST00000530604 POLA1P09884 1462 aaPredicted RBP32.08■■■□□ 2.73
RSF1-208ENST00000530604 ARHGEF11O15085 1522 aa31.98■■■□□ 2.71
RSF1-208ENST00000530604 RAD54L2Q9Y4B4 1467 aa31.97■■■□□ 2.71
RSF1-208ENST00000530604 CHD1O14646 1710 aa31.95■■■□□ 2.71
RSF1-208ENST00000530604 SOGA1O94964 1423 aa31.94■■■□□ 2.7
RSF1-208ENST00000530604 TDRD9Q8NDG6 1382 aaKnown RBP31.89■■■□□ 2.7
RSF1-208ENST00000530604 FGD5Q6ZNL6 1462 aa31.87■■■□□ 2.69
RSF1-208ENST00000530604 FBLN2P98095 1184 aa31.86■■■□□ 2.69
RSF1-208ENST00000530604 CUX1P39880 1505 aa31.85■■■□□ 2.69
RSF1-208ENST00000530604 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
RSF1-208ENST00000530604 CYB5RLQ6IPT4 315 aa31.77■■■□□ 2.68
RSF1-208ENST00000530604 SNAPC4Q5SXM2 1469 aa31.73■■■□□ 2.67
RSF1-208ENST00000530604 SUPT5HO00267 1087 aaKnown RBP31.68■■■□□ 2.66
RSF1-208ENST00000530604 ARAP1Q96P48 1450 aa31.67■■■□□ 2.66
RSF1-208ENST00000530604 MAGI1Q96QZ7 1491 aaPredicted RBP31.66■■■□□ 2.66
RSF1-208ENST00000530604 GRIN2BQ13224 1484 aa31.65■■■□□ 2.66
RSF1-208ENST00000530604 CHMP7Q8WUX9 453 aaPredicted RBP31.64■■■□□ 2.66
RSF1-208ENST00000530604 CLASP1Q7Z460 1538 aa31.59■■■□□ 2.65
RSF1-208ENST00000530604 SYNJ2O15056 1496 aa31.56■■■□□ 2.64
RSF1-208ENST00000530604 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
RSF1-208ENST00000530604 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
RSF1-208ENST00000530604 PBRM1Q86U86 1689 aa31.51■■■□□ 2.64
RSF1-208ENST00000530604 ABCA10Q8WWZ4 1543 aa31.51■■■□□ 2.63
RSF1-208ENST00000530604 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
RSF1-208ENST00000530604 TRHP20396 242 aaPredicted RBP31.41■■■□□ 2.62
RSF1-208ENST00000530604 WRNQ14191 1432 aaPredicted RBP eCLIP31.39■■■□□ 2.62
RSF1-208ENST00000530604 TOP2BQ02880 1626 aa31.32■■■□□ 2.6
RSF1-208ENST00000530604 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
RSF1-208ENST00000530604 GRIN2AQ12879 1464 aa31.25■■■□□ 2.59
RSF1-208ENST00000530604 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
RSF1-208ENST00000530604 NUP160Q12769 1436 aa31.15■■■□□ 2.58
RSF1-208ENST00000530604 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
RSF1-208ENST00000530604 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
RSF1-208ENST00000530604 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
RSF1-208ENST00000530604 ERCC6L2Q5T890 1561 aa31.1■■■□□ 2.57
RSF1-208ENST00000530604 SHROOM2Q13796 1616 aa31.02■■■□□ 2.56
RSF1-208ENST00000530604 JPH4Q96JJ6 628 aa30.86■■■□□ 2.53
RSF1-208ENST00000530604 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
RSF1-208ENST00000530604 RUSC2Q8N2Y8 1516 aa30.77■■■□□ 2.52
RSF1-208ENST00000530604 IGF1RP08069 1367 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms