RNA–Protein interactions for RNA: ENST00000396053.8

RBM4-202, Transcript of RNA binding motif protein 4, humanhuman

TSL 2 BASIC

Gene RBM4, Length 1,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-202ENST00000396053 NISCHQ9Y2I1 1504 aa30.23■■■□□ 2.43
RBM4-202ENST00000396053 AEBP2Q6ZN18 517 aaPredicted RBP27.5■■□□□ 1.99
RBM4-202ENST00000396053 CCDC180Q9P1Z9 1646 aa26.83■■□□□ 1.89
RBM4-202ENST00000396053 ABCC9O60706 1549 aa26.74■■□□□ 1.87
RBM4-202ENST00000396053 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
RBM4-202ENST00000396053 DNAJC5BQ9UF47 199 aa25.62■■□□□ 1.69
RBM4-202ENST00000396053 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
RBM4-202ENST00000396053 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
RBM4-202ENST00000396053 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
RBM4-202ENST00000396053 NACADO15069 1562 aa25.13■■□□□ 1.61
RBM4-202ENST00000396053 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
RBM4-202ENST00000396053 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
RBM4-202ENST00000396053 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
RBM4-202ENST00000396053 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
RBM4-202ENST00000396053 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
RBM4-202ENST00000396053 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
RBM4-202ENST00000396053 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
RBM4-202ENST00000396053 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
RBM4-202ENST00000396053 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
RBM4-202ENST00000396053 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
RBM4-202ENST00000396053 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
RBM4-202ENST00000396053 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
RBM4-202ENST00000396053 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
RBM4-202ENST00000396053 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
RBM4-202ENST00000396053 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
RBM4-202ENST00000396053 PEG3Q9GZU2 1588 aa23.24■■□□□ 1.31
RBM4-202ENST00000396053 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
RBM4-202ENST00000396053 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
RBM4-202ENST00000396053 CUX2O14529 1486 aa23.19■■□□□ 1.3
RBM4-202ENST00000396053 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
RBM4-202ENST00000396053 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
RBM4-202ENST00000396053 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
RBM4-202ENST00000396053 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
RBM4-202ENST00000396053 ERCC6Q03468 1493 aa23.02■■□□□ 1.27
RBM4-202ENST00000396053 WIZO95785 1651 aa23.01■■□□□ 1.27
RBM4-202ENST00000396053 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
RBM4-202ENST00000396053 NESP48681 1621 aa22.9■■□□□ 1.26
RBM4-202ENST00000396053 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
RBM4-202ENST00000396053 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
RBM4-202ENST00000396053 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
RBM4-202ENST00000396053 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
RBM4-202ENST00000396053 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
RBM4-202ENST00000396053 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
RBM4-202ENST00000396053 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
RBM4-202ENST00000396053 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
RBM4-202ENST00000396053 CFTRP13569 1480 aa22.43■■□□□ 1.18
RBM4-202ENST00000396053 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
RBM4-202ENST00000396053 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
RBM4-202ENST00000396053 WDR62O43379 1518 aa22.29■■□□□ 1.16
RBM4-202ENST00000396053 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
RBM4-202ENST00000396053 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
RBM4-202ENST00000396053 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
RBM4-202ENST00000396053 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
RBM4-202ENST00000396053 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
RBM4-202ENST00000396053 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
RBM4-202ENST00000396053 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
RBM4-202ENST00000396053 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
RBM4-202ENST00000396053 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
RBM4-202ENST00000396053 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
RBM4-202ENST00000396053 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
RBM4-202ENST00000396053 FOXD1Q16676 465 aa21.83■■□□□ 1.09
RBM4-202ENST00000396053 CUX1P39880 1505 aa21.81■■□□□ 1.08
RBM4-202ENST00000396053 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
RBM4-202ENST00000396053 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
RBM4-202ENST00000396053 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
RBM4-202ENST00000396053 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
RBM4-202ENST00000396053 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
RBM4-202ENST00000396053 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
RBM4-202ENST00000396053 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
RBM4-202ENST00000396053 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
RBM4-202ENST00000396053 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
RBM4-202ENST00000396053 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
RBM4-202ENST00000396053 SOGA1O94964 1423 aa21.61■■□□□ 1.05
RBM4-202ENST00000396053 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
RBM4-202ENST00000396053 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
RBM4-202ENST00000396053 CHD1O14646 1710 aa21.57■■□□□ 1.04
RBM4-202ENST00000396053 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
RBM4-202ENST00000396053 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
RBM4-202ENST00000396053 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
RBM4-202ENST00000396053 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
RBM4-202ENST00000396053 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.033e-7■■□□□ 13.9
RBM4-202ENST00000396053 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
RBM4-202ENST00000396053 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
RBM4-202ENST00000396053 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.01
RBM4-202ENST00000396053 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
RBM4-202ENST00000396053 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
RBM4-202ENST00000396053 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
RBM4-202ENST00000396053 KIF27Q86VH2 1401 aa21.33■■□□□ 1
RBM4-202ENST00000396053 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
RBM4-202ENST00000396053 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
RBM4-202ENST00000396053 CLASP1Q7Z460 1538 aa21.3■■□□□ 1
RBM4-202ENST00000396053 FBLN2P98095 1184 aa21.29■■□□□ 1
RBM4-202ENST00000396053 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
RBM4-202ENST00000396053 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
RBM4-202ENST00000396053 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
RBM4-202ENST00000396053 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
RBM4-202ENST00000396053 CUL7Q14999 1698 aa21.18■□□□□ 0.98
RBM4-202ENST00000396053 FHAD1B1AJZ9 1412 aa21.17■□□□□ 0.98
RBM4-202ENST00000396053 IGF1RP08069 1367 aa21.16■□□□□ 0.98
RBM4-202ENST00000396053 EEA1Q15075 1411 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms