RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
SREBF2-201ENST00000361204 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
SREBF2-201ENST00000361204 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
SREBF2-201ENST00000361204 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
SREBF2-201ENST00000361204 PELP1Q8IZL8 1130 aaKnown RBP28.33■■■□□ 2.13
SREBF2-201ENST00000361204 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
SREBF2-201ENST00000361204 EHMT2Q96KQ7 1210 aa28.19■■■□□ 2.1
SREBF2-201ENST00000361204 ZEB1P37275 1124 aaPredicted RBP27.78■■■□□ 2.04
SREBF2-201ENST00000361204 CENPBP07199 599 aaPredicted RBP27.74■■■□□ 2.03
SREBF2-201ENST00000361204 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
SREBF2-201ENST00000361204 APLP2Q06481 763 aa27.57■■■□□ 2
SREBF2-201ENST00000361204 MYT1Q01538 1121 aa27.51■■□□□ 1.99
SREBF2-201ENST00000361204 TTBK1Q5TCY1 1321 aaPredicted RBP27.39■■□□□ 1.98
SREBF2-201ENST00000361204 CCER1Q8TC90 406 aaPredicted RBP27.38■■□□□ 1.97
SREBF2-201ENST00000361204 HRCP23327 699 aa27.36■■□□□ 1.97
SREBF2-201ENST00000361204 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
SREBF2-201ENST00000361204 ERICH6Q7L0X2 663 aa27.13■■□□□ 1.93
SREBF2-201ENST00000361204 TRIM26Q12899 539 aaPredicted RBP27.04■■□□□ 1.92
SREBF2-201ENST00000361204 YTHDC1Q96MU7 727 aaKnown RBP26.98■■□□□ 1.91
SREBF2-201ENST00000361204 NEFLP07196 543 aa26.75■■□□□ 1.87
SREBF2-201ENST00000361204 PPARGC1BQ86YN6 1023 aaKnown RBP26.73■■□□□ 1.87
SREBF2-201ENST00000361204 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
SREBF2-201ENST00000361204 UBTFP17480 764 aaKnown RBP26.67■■□□□ 1.86
SREBF2-201ENST00000361204 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
SREBF2-201ENST00000361204 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.84
SREBF2-201ENST00000361204 ATP1B4Q9UN42 357 aaPredicted RBP26.29■■□□□ 1.8
SREBF2-201ENST00000361204 DIEXFQ68CQ4 756 aaKnown RBP26.22■■□□□ 1.79
SREBF2-201ENST00000361204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
SREBF2-201ENST00000361204 HNRNPUL2Q1KMD3 747 aaKnown RBP26.04■■□□□ 1.76
SREBF2-201ENST00000361204 GTF3C3Q9Y5Q9 886 aa26.01■■□□□ 1.75
SREBF2-201ENST00000361204 ITGAEP38570 1179 aa25.88■■□□□ 1.73
SREBF2-201ENST00000361204 DAXXQ9UER7 740 aaPredicted RBP25.76■■□□□ 1.71
SREBF2-201ENST00000361204 ACIN1Q9UKV3 1341 aaKnown RBP25.74■■□□□ 1.71
SREBF2-201ENST00000361204 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
SREBF2-201ENST00000361204 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
SREBF2-201ENST00000361204 ZNF316A6NFI3 1004 aaPredicted RBP25.55■■□□□ 1.68
SREBF2-201ENST00000361204 BCANQ96GW7 911 aa25.51■■□□□ 1.67
SREBF2-201ENST00000361204 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
SREBF2-201ENST00000361204 CDK11AQ9UQ88 783 aaPredicted RBP25.29■■□□□ 1.64
SREBF2-201ENST00000361204 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
SREBF2-201ENST00000361204 ANP32CO43423 234 aa25.23■■□□□ 1.63
SREBF2-201ENST00000361204 NEUROD1Q13562 356 aa25.2■■□□□ 1.63
SREBF2-201ENST00000361204 SCAF1Q9H7N4 1312 aaKnown RBP25.2■■□□□ 1.62
SREBF2-201ENST00000361204 FAM50AQ14320 339 aaKnown RBP25.18■■□□□ 1.62
SREBF2-201ENST00000361204 CLSPNQ9HAW4 1339 aa25.13■■□□□ 1.61
SREBF2-201ENST00000361204 TRIM52Q96A61 297 aa24.95■■□□□ 1.58
SREBF2-201ENST00000361204 FKBP8Q14318 412 aa24.9■■□□□ 1.58
SREBF2-201ENST00000361204 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
SREBF2-201ENST00000361204 ANP32AP39687 249 aaKnown RBP24.84■■□□□ 1.57
SREBF2-201ENST00000361204 MYT1LQ9UL68 1186 aa24.79■■□□□ 1.56
SREBF2-201ENST00000361204 ABCC9O60706 1549 aa24.79■■□□□ 1.56
SREBF2-201ENST00000361204 SLC4A1APQ9BWU0 796 aaKnown RBP24.69■■□□□ 1.54
SREBF2-201ENST00000361204 MIER1Q8N108 512 aa24.69■■□□□ 1.54
SREBF2-201ENST00000361204 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
SREBF2-201ENST00000361204 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.543e-9■□□□□ 10
SREBF2-201ENST00000361204 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
SREBF2-201ENST00000361204 DDX10Q13206 875 aaKnown RBP24.61■■□□□ 1.53
SREBF2-201ENST00000361204 NPM2Q86SE8 214 aaKnown RBP24.59■■□□□ 1.53
SREBF2-201ENST00000361204 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.532e-14■■□□□ 13.6
SREBF2-201ENST00000361204 EIF5BO60841 1220 aaKnown RBP24.52■■□□□ 1.52
SREBF2-201ENST00000361204 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
SREBF2-201ENST00000361204 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
SREBF2-201ENST00000361204 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
SREBF2-201ENST00000361204 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
SREBF2-201ENST00000361204 CCDC180Q9P1Z9 1646 aa24.41■■□□□ 1.5
SREBF2-201ENST00000361204 NBR1Q14596 966 aa24.4■■□□□ 1.5
SREBF2-201ENST00000361204 P3H3Q8IVL6 736 aa24.39■■□□□ 1.5
SREBF2-201ENST00000361204 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
SREBF2-201ENST00000361204 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
SREBF2-201ENST00000361204 CCDC136Q96JN2 1154 aa24.33■■□□□ 1.49
SREBF2-201ENST00000361204 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
SREBF2-201ENST00000361204 GLIPR1L2Q4G1C9 344 aa24.18■■□□□ 1.46
SREBF2-201ENST00000361204 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
SREBF2-201ENST00000361204 ANP32BQ92688 251 aaKnown RBP24.11■■□□□ 1.45
SREBF2-201ENST00000361204 TMC1Q8TDI8 760 aa24.11■■□□□ 1.45
SREBF2-201ENST00000361204 HIRIP3Q9BW71 556 aaPredicted RBP24.11■■□□□ 1.45
SREBF2-201ENST00000361204 UPF2Q9HAU5 1272 aaKnown RBP24.11■■□□□ 1.45
SREBF2-201ENST00000361204 BCL11AQ9H165 835 aa24.11■■□□□ 1.45
SREBF2-201ENST00000361204 ARID3CA6NKF2 412 aa24.1■■□□□ 1.45
SREBF2-201ENST00000361204 SALL2Q9Y467 1007 aaPredicted RBP24.09■■□□□ 1.45
SREBF2-201ENST00000361204 CLIP1P30622 1438 aa24.09■■□□□ 1.45
SREBF2-201ENST00000361204 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
SREBF2-201ENST00000361204 SUPT16HQ9Y5B9 1047 aaKnown RBP24.08■■□□□ 1.45
SREBF2-201ENST00000361204 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
SREBF2-201ENST00000361204 HSP90AA1P07900 732 aaKnown RBP24.01■■□□□ 1.43
SREBF2-201ENST00000361204 ZNF777Q9ULD5 760 aaPredicted RBP24.01■■□□□ 1.43
SREBF2-201ENST00000361204 NEFMP07197 916 aa24.01■■□□□ 1.43
SREBF2-201ENST00000361204 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.43
SREBF2-201ENST00000361204 EIF4G2P78344 907 aaKnown RBP eCLIP23.94■■□□□ 1.42
SREBF2-201ENST00000361204 CHIC2Q9UKJ5 165 aa23.92■■□□□ 1.42
SREBF2-201ENST00000361204 EEA1Q15075 1411 aa23.92■■□□□ 1.42
SREBF2-201ENST00000361204 ARXQ96QS3 562 aa23.89■■□□□ 1.42
SREBF2-201ENST00000361204 GOLGA3Q08378 1498 aa23.89■■□□□ 1.41
SREBF2-201ENST00000361204 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
SREBF2-201ENST00000361204 FBLN2P98095 1184 aa23.87■■□□□ 1.41
SREBF2-201ENST00000361204 DDRGK1Q96HY6 314 aa23.87■■□□□ 1.41
SREBF2-201ENST00000361204 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
SREBF2-201ENST00000361204 PPP4R2Q9NY27 417 aa23.83■■□□□ 1.4
SREBF2-201ENST00000361204 WDR43Q15061 677 aaKnown RBP eCLIP23.79■■□□□ 1.41e-7■■■■■ 35
SREBF2-201ENST00000361204 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms