RNA–Protein interactions for RNA: ENST00000520220.6

LYN-204, Transcript of LYN proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LYN, Length 5,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYN-204ENST00000520220 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
LYN-204ENST00000520220 NISCHQ9Y2I1 1504 aa23.72■■□□□ 1.39
LYN-204ENST00000520220 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
LYN-204ENST00000520220 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
LYN-204ENST00000520220 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
LYN-204ENST00000520220 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
LYN-204ENST00000520220 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
LYN-204ENST00000520220 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
LYN-204ENST00000520220 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
LYN-204ENST00000520220 APLP2Q06481 763 aa21.55■■□□□ 1.04
LYN-204ENST00000520220 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
LYN-204ENST00000520220 PPARGC1BQ86YN6 1023 aaKnown RBP21.18■□□□□ 0.98
LYN-204ENST00000520220 ATP1B4Q9UN42 357 aaPredicted RBP21.17■□□□□ 0.98
LYN-204ENST00000520220 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
LYN-204ENST00000520220 CCER1Q8TC90 406 aaPredicted RBP21.03■□□□□ 0.96
LYN-204ENST00000520220 PELP1Q8IZL8 1130 aaKnown RBP20.93■□□□□ 0.94
LYN-204ENST00000520220 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
LYN-204ENST00000520220 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
LYN-204ENST00000520220 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
LYN-204ENST00000520220 CENPBP07199 599 aaPredicted RBP20.66■□□□□ 0.9
LYN-204ENST00000520220 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
LYN-204ENST00000520220 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
LYN-204ENST00000520220 ITGAEP38570 1179 aa20.58■□□□□ 0.89
LYN-204ENST00000520220 ABCC9O60706 1549 aa20.56■□□□□ 0.88
LYN-204ENST00000520220 HRCP23327 699 aa20.54■□□□□ 0.88
LYN-204ENST00000520220 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
LYN-204ENST00000520220 HNRNPUL2Q1KMD3 747 aaKnown RBP20.43■□□□□ 0.86
LYN-204ENST00000520220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.37■□□□□ 0.85
LYN-204ENST00000520220 CNGB1Q14028 1251 aaPredicted RBP20.2■□□□□ 0.82
LYN-204ENST00000520220 POLR3GLQ9BT43 218 aa20.19■□□□□ 0.82
LYN-204ENST00000520220 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
LYN-204ENST00000520220 ERICH6Q7L0X2 663 aa20.14■□□□□ 0.81
LYN-204ENST00000520220 NEFLP07196 543 aa20.1■□□□□ 0.81
LYN-204ENST00000520220 FAM50AQ14320 339 aaKnown RBP19.97■□□□□ 0.79
LYN-204ENST00000520220 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
LYN-204ENST00000520220 DIEXFQ68CQ4 756 aaKnown RBP19.8■□□□□ 0.76
LYN-204ENST00000520220 P3H3Q8IVL6 736 aa19.79■□□□□ 0.76
LYN-204ENST00000520220 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
LYN-204ENST00000520220 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
LYN-204ENST00000520220 FBLN2P98095 1184 aa19.77■□□□□ 0.76
LYN-204ENST00000520220 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
LYN-204ENST00000520220 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
LYN-204ENST00000520220 MYT1Q01538 1121 aa19.63■□□□□ 0.73
LYN-204ENST00000520220 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
LYN-204ENST00000520220 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
LYN-204ENST00000520220 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
LYN-204ENST00000520220 BCANQ96GW7 911 aa19.48■□□□□ 0.71
LYN-204ENST00000520220 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
LYN-204ENST00000520220 GTF3C3Q9Y5Q9 886 aa19.4■□□□□ 0.7
LYN-204ENST00000520220 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
LYN-204ENST00000520220 DAXXQ9UER7 740 aaPredicted RBP19.36■□□□□ 0.69
LYN-204ENST00000520220 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
LYN-204ENST00000520220 ANP32CO43423 234 aa19.29■□□□□ 0.68
LYN-204ENST00000520220 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
LYN-204ENST00000520220 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
LYN-204ENST00000520220 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
LYN-204ENST00000520220 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
LYN-204ENST00000520220 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
LYN-204ENST00000520220 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
LYN-204ENST00000520220 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
LYN-204ENST00000520220 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
LYN-204ENST00000520220 DDX10Q13206 875 aaKnown RBP19.03■□□□□ 0.64
LYN-204ENST00000520220 HIRIP3Q9BW71 556 aaPredicted RBP19.01■□□□□ 0.63
LYN-204ENST00000520220 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
LYN-204ENST00000520220 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
LYN-204ENST00000520220 TONSLQ96HA7 1378 aa18.99■□□□□ 0.63
LYN-204ENST00000520220 SLC24A1O60721 1099 aa18.97■□□□□ 0.63
LYN-204ENST00000520220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
LYN-204ENST00000520220 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
LYN-204ENST00000520220 CLIP1P30622 1438 aa18.95■□□□□ 0.62
LYN-204ENST00000520220 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
LYN-204ENST00000520220 SALL2Q9Y467 1007 aaPredicted RBP18.91■□□□□ 0.62
LYN-204ENST00000520220 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
LYN-204ENST00000520220 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.61
LYN-204ENST00000520220 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
LYN-204ENST00000520220 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
LYN-204ENST00000520220 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
LYN-204ENST00000520220 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
LYN-204ENST00000520220 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
LYN-204ENST00000520220 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
LYN-204ENST00000520220 CEP162Q5TB80 1403 aa18.85■□□□□ 0.61
LYN-204ENST00000520220 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
LYN-204ENST00000520220 FKBP8Q14318 412 aa18.84■□□□□ 0.61
LYN-204ENST00000520220 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
LYN-204ENST00000520220 MIER1Q8N108 512 aa18.8■□□□□ 0.6
LYN-204ENST00000520220 BAZ1BQ9UIG0 1483 aaKnown RBP18.79■□□□□ 0.6
LYN-204ENST00000520220 STAG3Q9UJ98 1225 aa18.77■□□□□ 0.6
LYN-204ENST00000520220 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
LYN-204ENST00000520220 EEA1Q15075 1411 aa18.76■□□□□ 0.59
LYN-204ENST00000520220 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
LYN-204ENST00000520220 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
LYN-204ENST00000520220 NACADO15069 1562 aa18.75■□□□□ 0.59
LYN-204ENST00000520220 NPM2Q86SE8 214 aaKnown RBP18.75■□□□□ 0.59
LYN-204ENST00000520220 SENP3-EIF4A1A0A087X0R7 540 aa18.75■□□□□ 0.59
LYN-204ENST00000520220 ESF1Q9H501 851 aaKnown RBP18.74■□□□□ 0.59
LYN-204ENST00000520220 TSPY4P0CV99 314 aa18.72■□□□□ 0.59
LYN-204ENST00000520220 TSPY10P0CW01 314 aa18.72■□□□□ 0.59
LYN-204ENST00000520220 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
LYN-204ENST00000520220 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
LYN-204ENST00000520220 NEFMP07197 916 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms