RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 DCAF8L2P0C7V8 631 aa6.82□□□□□ -1.32
UBR3-202ENST00000392632 FAM9AQ8IZU1 332 aaPredicted RBP6.55□□□□□ -1.36
UBR3-202ENST00000392632 PELP1Q8IZL8 1130 aaKnown RBP6.43□□□□□ -1.38
UBR3-202ENST00000392632 APLP2Q06481 763 aa6.34□□□□□ -1.39
UBR3-202ENST00000392632 SUPT5HO00267 1087 aaKnown RBP6.22□□□□□ -1.41
UBR3-202ENST00000392632 CCER1Q8TC90 406 aaPredicted RBP6.15□□□□□ -1.42
UBR3-202ENST00000392632 ERICH6Q7L0X2 663 aa6.05□□□□□ -1.44
UBR3-202ENST00000392632 EHMT2Q96KQ7 1210 aa6.02□□□□□ -1.45
UBR3-202ENST00000392632 ATP1B4Q9UN42 357 aaPredicted RBP6.01□□□□□ -1.45
UBR3-202ENST00000392632 NISCHQ9Y2I1 1504 aa6□□□□□ -1.45
UBR3-202ENST00000392632 MYT1LQ9UL68 1186 aa5.99□□□□□ -1.45
UBR3-202ENST00000392632 NEFLP07196 543 aa5.94□□□□□ -1.46
UBR3-202ENST00000392632 SHROOM4Q9ULL8 1493 aa5.94□□□□□ -1.46
UBR3-202ENST00000392632 CENPBP07199 599 aaPredicted RBP5.92□□□□□ -1.46
UBR3-202ENST00000392632 AEBP2Q6ZN18 517 aaPredicted RBP5.89□□□□□ -1.47
UBR3-202ENST00000392632 ZEB1P37275 1124 aaPredicted RBP5.89□□□□□ -1.47
UBR3-202ENST00000392632 DAXXQ9UER7 740 aaPredicted RBP5.88□□□□□ -1.47
UBR3-202ENST00000392632 UBTFP17480 764 aaKnown RBP5.88□□□□□ -1.47
UBR3-202ENST00000392632 RANGAP1P46060 587 aaPredicted RBP5.88□□□□□ -1.47
UBR3-202ENST00000392632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.87□□□□□ -1.47
UBR3-202ENST00000392632 HNRNPUL2Q1KMD3 747 aaKnown RBP5.87□□□□□ -1.47
UBR3-202ENST00000392632 TRIM41Q8WV44 630 aa5.84□□□□□ -1.47
UBR3-202ENST00000392632 YTHDC1Q96MU7 727 aaKnown RBP5.84□□□□□ -1.47
UBR3-202ENST00000392632 PCGF6Q9BYE7 350 aa5.83□□□□□ -1.48
UBR3-202ENST00000392632 TTBK1Q5TCY1 1321 aaPredicted RBP5.83□□□□□ -1.48
UBR3-202ENST00000392632 CHIC1Q5VXU3 224 aa5.78□□□□□ -1.48
UBR3-202ENST00000392632 SLC4A1APQ9BWU0 796 aaKnown RBP5.77□□□□□ -1.49
UBR3-202ENST00000392632 ZBTB47Q9UFB7 747 aaPredicted RBP5.74□□□□□ -1.49
UBR3-202ENST00000392632 POLR3GLQ9BT43 218 aa5.74□□□□□ -1.49
UBR3-202ENST00000392632 MYT1Q01538 1121 aa5.7□□□□□ -1.5
UBR3-202ENST00000392632 CLSPNQ9HAW4 1339 aa5.7□□□□□ -1.5
UBR3-202ENST00000392632 NEFMP07197 916 aa5.7□□□□□ -1.5
UBR3-202ENST00000392632 ESF1Q9H501 851 aaKnown RBP5.68□□□□□ -1.5
UBR3-202ENST00000392632 ZNF316A6NFI3 1004 aaPredicted RBP5.66□□□□□ -1.5
UBR3-202ENST00000392632 BCANQ96GW7 911 aa5.65□□□□□ -1.51
UBR3-202ENST00000392632 ITGAEP38570 1179 aa5.63□□□□□ -1.51
UBR3-202ENST00000392632 SLC24A1O60721 1099 aa5.61□□□□□ -1.51
UBR3-202ENST00000392632 RTL5Q5HYW3 569 aaPredicted RBP5.61□□□□□ -1.51
UBR3-202ENST00000392632 NPM1P06748 294 aaKnown RBP eCLIP5.59□□□□□ -1.51
UBR3-202ENST00000392632 TRIM52Q96A61 297 aa5.57□□□□□ -1.52
UBR3-202ENST00000392632 FBLN2P98095 1184 aa5.56□□□□□ -1.52
UBR3-202ENST00000392632 NPM2Q86SE8 214 aaKnown RBP5.56□□□□□ -1.52
UBR3-202ENST00000392632 CNGB1Q14028 1251 aaPredicted RBP5.56□□□□□ -1.52
UBR3-202ENST00000392632 STAG3Q9UJ98 1225 aa5.55□□□□□ -1.52
UBR3-202ENST00000392632 CDK11AQ9UQ88 783 aaPredicted RBP5.55□□□□□ -1.52
UBR3-202ENST00000392632 CANXP27824 592 aaKnown RBP5.53□□□□□ -1.52
UBR3-202ENST00000392632 CDK11BP21127 795 aaKnown RBP5.52□□□□□ -1.53
UBR3-202ENST00000392632 FAM50AQ14320 339 aaKnown RBP5.52□□□□□ -1.53
UBR3-202ENST00000392632 TRIM26Q12899 539 aaPredicted RBP5.51□□□□□ -1.53
UBR3-202ENST00000392632 ZNF326Q5BKZ1 582 aaKnown RBP5.48□□□□□ -1.53
UBR3-202ENST00000392632 ANP32BQ92688 251 aaKnown RBP5.47□□□□□ -1.53
UBR3-202ENST00000392632 ANP32CO43423 234 aa5.45□□□□□ -1.54
UBR3-202ENST00000392632 PPARGC1BQ86YN6 1023 aaKnown RBP5.44□□□□□ -1.54
UBR3-202ENST00000392632 CHGAP10645 457 aaKnown RBP5.43□□□□□ -1.54
UBR3-202ENST00000392632 BCL11AQ9H165 835 aa5.42□□□□□ -1.54
UBR3-202ENST00000392632 UPF2Q9HAU5 1272 aaKnown RBP5.42□□□□□ -1.54
UBR3-202ENST00000392632 A0A0G2JS52 829 aa5.42□□□□□ -1.54
UBR3-202ENST00000392632 HSP90AA1P07900 732 aaKnown RBP5.42□□□□□ -1.54
UBR3-202ENST00000392632 HAP1P54257 671 aaPredicted RBP5.41□□□□□ -1.54
UBR3-202ENST00000392632 SCAF1Q9H7N4 1312 aaKnown RBP5.41□□□□□ -1.54
UBR3-202ENST00000392632 PLPPR3Q6T4P5 718 aa5.41□□□□□ -1.54
UBR3-202ENST00000392632 NEUROD1Q13562 356 aa5.4□□□□□ -1.55
UBR3-202ENST00000392632 C14orf37Q86TY3 774 aa5.4□□□□□ -1.55
UBR3-202ENST00000392632 ZNF777Q9ULD5 760 aaPredicted RBP5.39□□□□□ -1.55
UBR3-202ENST00000392632 PABPN1Q86U42 306 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBR3-202ENST00000392632 HRCP23327 699 aa5.37□□□□□ -1.55
UBR3-202ENST00000392632 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.37□□□□□ -1.55
UBR3-202ENST00000392632 PPP1R15AO75807 674 aaPredicted RBP5.36□□□□□ -1.55
UBR3-202ENST00000392632 MYH16Q9H6N6 1097 aa5.36□□□□□ -1.55
UBR3-202ENST00000392632 EIF5BO60841 1220 aaKnown RBP5.36□□□□□ -1.55
UBR3-202ENST00000392632 TSPY4P0CV99 314 aa5.36□□□□□ -1.55
UBR3-202ENST00000392632 TSPY10P0CW01 314 aa5.36□□□□□ -1.55
UBR3-202ENST00000392632 ANP32AP39687 249 aaKnown RBP5.36□□□□□ -1.55
UBR3-202ENST00000392632 ACIN1Q9UKV3 1341 aaKnown RBP5.35□□□□□ -1.55
UBR3-202ENST00000392632 EIF4G2P78344 907 aaKnown RBP eCLIP5.34□□□□□ -1.55
UBR3-202ENST00000392632 NPHP1O15259 732 aa5.33□□□□□ -1.56
UBR3-202ENST00000392632 DIEXFQ68CQ4 756 aaKnown RBP5.31□□□□□ -1.56
UBR3-202ENST00000392632 ARID4BQ4LE39 1312 aaPredicted RBP5.31□□□□□ -1.56
UBR3-202ENST00000392632 ZRSR1Q15695 479 aaKnown RBP5.31□□□□□ -1.56
UBR3-202ENST00000392632 ABCC9O60706 1549 aa5.31□□□□□ -1.56
UBR3-202ENST00000392632 NCLP19338 710 aaKnown RBP5.3□□□□□ -1.56
UBR3-202ENST00000392632 WDR43Q15061 677 aaKnown RBP eCLIP5.3□□□□□ -1.56
UBR3-202ENST00000392632 ARID3CA6NKF2 412 aa5.3□□□□□ -1.56
UBR3-202ENST00000392632 HDGFP51858 240 aaKnown RBP5.3□□□□□ -1.56
UBR3-202ENST00000392632 CHMP7Q8WUX9 453 aaPredicted RBP5.29□□□□□ -1.56
UBR3-202ENST00000392632 ARXQ96QS3 562 aa5.29□□□□□ -1.56
UBR3-202ENST00000392632 ZBTB7CA1YPR0 619 aa5.28□□□□□ -1.56
UBR3-202ENST00000392632 GOLGA2Q08379 1002 aa5.28□□□□□ -1.56
UBR3-202ENST00000392632 TONSLQ96HA7 1378 aa5.28□□□□□ -1.56
UBR3-202ENST00000392632 CDCA8Q53HL2 280 aa5.28□□□□□ -1.56
UBR3-202ENST00000392632 P3H3Q8IVL6 736 aa5.28□□□□□ -1.56
UBR3-202ENST00000392632 CFAP53Q96M91 514 aa5.28□□□□□ -1.56
UBR3-202ENST00000392632 ANP32EQ9BTT0 268 aa5.27□□□□□ -1.57
UBR3-202ENST00000392632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.27□□□□□ -1.573e-6■■■□□ 14.9
UBR3-202ENST00000392632 TMX4Q9H1E5 349 aaPredicted RBP5.27□□□□□ -1.57
UBR3-202ENST00000392632 CHMP4BQ9H444 224 aaKnown RBP5.26□□□□□ -1.57
UBR3-202ENST00000392632 TMC1Q8TDI8 760 aa5.26□□□□□ -1.57
UBR3-202ENST00000392632 GLIPR1L2Q4G1C9 344 aa5.26□□□□□ -1.57
UBR3-202ENST00000392632 CSRNP3Q8WYN3 585 aa5.26□□□□□ -1.57
UBR3-202ENST00000392632 GOLGA6L22H0YM25 854 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms