RNA–Protein interactions for RNA: ENST00000270583.9

KLHDC4-201, Transcript of kelch domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KLHDC4, Length 1,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-201ENST00000270583 NISCHQ9Y2I1 1504 aa45.69■■■■■ 4.9
KLHDC4-201ENST00000270583 CCDC180Q9P1Z9 1646 aa40.15■■■■■ 4.02
KLHDC4-201ENST00000270583 ABCC9O60706 1549 aa38.42■■■■□ 3.74
KLHDC4-201ENST00000270583 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
KLHDC4-201ENST00000270583 DCAF8L2P0C7V8 631 aa37.92■■■■□ 3.66
KLHDC4-201ENST00000270583 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
KLHDC4-201ENST00000270583 MYO15BQ96JP2 1530 aa37.54■■■■□ 3.6
KLHDC4-201ENST00000270583 NACADO15069 1562 aa37.5■■■■□ 3.59
KLHDC4-201ENST00000270583 RB1CC1Q8TDY2 1594 aa37.33■■■■□ 3.57
KLHDC4-201ENST00000270583 SHROOM4Q9ULL8 1493 aa36.87■■■■□ 3.49
KLHDC4-201ENST00000270583 SCRIBQ14160 1630 aa36.82■■■■□ 3.48
KLHDC4-201ENST00000270583 UNC13AQ9UPW8 1703 aa36.57■■■■□ 3.45
KLHDC4-201ENST00000270583 BICRAQ9NZM4 1560 aa36.17■■■■□ 3.38
KLHDC4-201ENST00000270583 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
KLHDC4-201ENST00000270583 CECR2Q9BXF3 1484 aa35.51■■■■□ 3.28
KLHDC4-201ENST00000270583 BAZ1AQ9NRL2 1556 aaPredicted RBP35.35■■■■□ 3.25
KLHDC4-201ENST00000270583 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.24
KLHDC4-201ENST00000270583 SMARCA4P51532 1647 aa35.26■■■■□ 3.24
KLHDC4-201ENST00000270583 RSF1Q96T23 1441 aaPredicted RBP35.2■■■■□ 3.23
KLHDC4-201ENST00000270583 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.22
KLHDC4-201ENST00000270583 EIF4G1Q04637 1599 aaKnown RBP35.14■■■■□ 3.22
KLHDC4-201ENST00000270583 WIZO95785 1651 aa34.98■■■■□ 3.19
KLHDC4-201ENST00000270583 PEG3Q9GZU2 1588 aa34.83■■■■□ 3.17
KLHDC4-201ENST00000270583 SMARCA2P51531 1590 aa34.79■■■■□ 3.16
KLHDC4-201ENST00000270583 ATAD2BQ9ULI0 1458 aa34.79■■■■□ 3.16
KLHDC4-201ENST00000270583 CC2D2AQ9P2K1 1620 aa34.77■■■■□ 3.16
KLHDC4-201ENST00000270583 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
KLHDC4-201ENST00000270583 TOP2AP11388 1531 aaKnown RBP34.59■■■■□ 3.13
KLHDC4-201ENST00000270583 BAZ1BQ9UIG0 1483 aaKnown RBP34.59■■■■□ 3.13
KLHDC4-201ENST00000270583 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
KLHDC4-201ENST00000270583 HMGXB3Q12766 1538 aa34.52■■■■□ 3.12
KLHDC4-201ENST00000270583 CCDC88BA6NC98 1476 aa34.21■■■■□ 3.07
KLHDC4-201ENST00000270583 CFTRP13569 1480 aa33.66■■■□□ 2.98
KLHDC4-201ENST00000270583 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
KLHDC4-201ENST00000270583 PRDM2Q13029 1718 aa33.56■■■□□ 2.96
KLHDC4-201ENST00000270583 LAMC3Q9Y6N6 1575 aa33.54■■■□□ 2.96
KLHDC4-201ENST00000270583 NESP48681 1621 aa33.54■■■□□ 2.96
KLHDC4-201ENST00000270583 CHIC1Q5VXU3 224 aa33.38■■■□□ 2.93
KLHDC4-201ENST00000270583 ABCC8Q09428 1581 aa33.33■■■□□ 2.93
KLHDC4-201ENST00000270583 FANCD2Q9BXW9 1451 aa33.3■■■□□ 2.92
KLHDC4-201ENST00000270583 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
KLHDC4-201ENST00000270583 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
KLHDC4-201ENST00000270583 WRNQ14191 1432 aaPredicted RBP eCLIP33.18■■■□□ 2.9
KLHDC4-201ENST00000270583 CEP164Q9UPV0 1460 aa33.16■■■□□ 2.9
KLHDC4-201ENST00000270583 TRIM41Q8WV44 630 aa33.15■■■□□ 2.9
KLHDC4-201ENST00000270583 SYNJ1O43426 1573 aa33.07■■■□□ 2.88
KLHDC4-201ENST00000270583 ERCC6Q03468 1493 aa33.03■■■□□ 2.88
KLHDC4-201ENST00000270583 CUX1P39880 1505 aa33.01■■■□□ 2.88
KLHDC4-201ENST00000270583 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
KLHDC4-201ENST00000270583 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
KLHDC4-201ENST00000270583 DNMBPQ6XZF7 1577 aa32.92■■■□□ 2.86
KLHDC4-201ENST00000270583 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
KLHDC4-201ENST00000270583 MRC2Q9UBG0 1479 aa32.88■■■□□ 2.85
KLHDC4-201ENST00000270583 TOPBP1Q92547 1522 aa32.88■■■□□ 2.85
KLHDC4-201ENST00000270583 THOC2Q8NI27 1593 aaKnown RBP32.77■■■□□ 2.84
KLHDC4-201ENST00000270583 FGD5Q6ZNL6 1462 aa32.75■■■□□ 2.83
KLHDC4-201ENST00000270583 WDR62O43379 1518 aa32.73■■■□□ 2.83
KLHDC4-201ENST00000270583 POLA1P09884 1462 aaPredicted RBP32.67■■■□□ 2.82
KLHDC4-201ENST00000270583 SOGA1O94964 1423 aa32.56■■■□□ 2.8
KLHDC4-201ENST00000270583 RAD54L2Q9Y4B4 1467 aa32.55■■■□□ 2.8
KLHDC4-201ENST00000270583 FAM9AQ8IZU1 332 aaPredicted RBP32.51■■■□□ 2.79
KLHDC4-201ENST00000270583 CUX2O14529 1486 aa32.47■■■□□ 2.79
KLHDC4-201ENST00000270583 RUSC2Q8N2Y8 1516 aa32.47■■■□□ 2.79
KLHDC4-201ENST00000270583 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
KLHDC4-201ENST00000270583 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
KLHDC4-201ENST00000270583 WDR97A6NE52 1622 aa32.42■■■□□ 2.78
KLHDC4-201ENST00000270583 EEA1Q15075 1411 aa32.42■■■□□ 2.78
KLHDC4-201ENST00000270583 KIF27Q86VH2 1401 aa32.4■■■□□ 2.78
KLHDC4-201ENST00000270583 IFT140Q96RY7 1462 aa32.39■■■□□ 2.78
KLHDC4-201ENST00000270583 CSRNP3Q8WYN3 585 aa32.28■■■□□ 2.76
KLHDC4-201ENST00000270583 TDRD9Q8NDG6 1382 aaKnown RBP32.28■■■□□ 2.76
KLHDC4-201ENST00000270583 ABCA5Q8WWZ7 1642 aa32.25■■■□□ 2.75
KLHDC4-201ENST00000270583 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
KLHDC4-201ENST00000270583 GAPVD1Q14C86 1478 aa32.2■■■□□ 2.75
KLHDC4-201ENST00000270583 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.741e-8■■■□□ 16.7
KLHDC4-201ENST00000270583 EIF4G3O43432 1585 aaKnown RBP32.14■■■□□ 2.74
KLHDC4-201ENST00000270583 IGF1RP08069 1367 aa32.13■■■□□ 2.73
KLHDC4-201ENST00000270583 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
KLHDC4-201ENST00000270583 EHMT2Q96KQ7 1210 aa32.08■■■□□ 2.73
KLHDC4-201ENST00000270583 ERICH3Q5RHP9 1530 aa32.08■■■□□ 2.73
KLHDC4-201ENST00000270583 LOC105371045A0A1W2PR82 267 aa32.08■■■□□ 2.73
KLHDC4-201ENST00000270583 KIF21BO75037 1637 aa32.04■■■□□ 2.72
KLHDC4-201ENST00000270583 GRIN2BQ13224 1484 aa32.03■■■□□ 2.72
KLHDC4-201ENST00000270583 PRXQ9BXM0 1461 aa32.01■■■□□ 2.72
KLHDC4-201ENST00000270583 CUL7Q14999 1698 aa32.01■■■□□ 2.71
KLHDC4-201ENST00000270583 CARMIL1Q5VZK9 1371 aa31.98■■■□□ 2.71
KLHDC4-201ENST00000270583 GOLGA3Q08378 1498 aa31.95■■■□□ 2.71
KLHDC4-201ENST00000270583 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
KLHDC4-201ENST00000270583 SNAPC4Q5SXM2 1469 aa31.89■■■□□ 2.7
KLHDC4-201ENST00000270583 ADAMTS12P58397 1594 aa31.87■■■□□ 2.69
KLHDC4-201ENST00000270583 UBTFP17480 764 aaKnown RBP31.84■■■□□ 2.69
KLHDC4-201ENST00000270583 FHAD1B1AJZ9 1412 aa31.84■■■□□ 2.69
KLHDC4-201ENST00000270583 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
KLHDC4-201ENST00000270583 TNIKQ9UKE5 1360 aa31.72■■■□□ 2.67
KLHDC4-201ENST00000270583 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
KLHDC4-201ENST00000270583 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
KLHDC4-201ENST00000270583 FBLN2P98095 1184 aa31.65■■■□□ 2.66
KLHDC4-201ENST00000270583 GRIN2AQ12879 1464 aa31.64■■■□□ 2.66
KLHDC4-201ENST00000270583 CTTNBP2Q8WZ74 1663 aa31.6■■■□□ 2.65
KLHDC4-201ENST00000270583 CHD1O14646 1710 aa31.57■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms