RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
RAB5B-204ENST00000548068 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
RAB5B-204ENST00000548068 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
RAB5B-204ENST00000548068 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
RAB5B-204ENST00000548068 ABCC9O60706 1549 aa23.44■■□□□ 1.34
RAB5B-204ENST00000548068 MYO15BQ96JP2 1530 aa23.3■■□□□ 1.32
RAB5B-204ENST00000548068 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
RAB5B-204ENST00000548068 NACADO15069 1562 aa23.17■■□□□ 1.3
RAB5B-204ENST00000548068 RB1CC1Q8TDY2 1594 aa23.01■■□□□ 1.27
RAB5B-204ENST00000548068 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
RAB5B-204ENST00000548068 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
RAB5B-204ENST00000548068 UNC13AQ9UPW8 1703 aa22.49■■□□□ 1.19
RAB5B-204ENST00000548068 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
RAB5B-204ENST00000548068 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
RAB5B-204ENST00000548068 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
RAB5B-204ENST00000548068 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
RAB5B-204ENST00000548068 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
RAB5B-204ENST00000548068 RSF1Q96T23 1441 aaPredicted RBP21.87■■□□□ 1.09
RAB5B-204ENST00000548068 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
RAB5B-204ENST00000548068 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
RAB5B-204ENST00000548068 WIZO95785 1651 aa21.66■■□□□ 1.06
RAB5B-204ENST00000548068 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
RAB5B-204ENST00000548068 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
RAB5B-204ENST00000548068 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
RAB5B-204ENST00000548068 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
RAB5B-204ENST00000548068 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
RAB5B-204ENST00000548068 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
RAB5B-204ENST00000548068 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
RAB5B-204ENST00000548068 NCAPD3P42695 1498 aa21.31■■□□□ 1
RAB5B-204ENST00000548068 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
RAB5B-204ENST00000548068 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
RAB5B-204ENST00000548068 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
RAB5B-204ENST00000548068 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
RAB5B-204ENST00000548068 CFTRP13569 1480 aa20.8■□□□□ 0.92
RAB5B-204ENST00000548068 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
RAB5B-204ENST00000548068 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
RAB5B-204ENST00000548068 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
RAB5B-204ENST00000548068 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
RAB5B-204ENST00000548068 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
RAB5B-204ENST00000548068 DNAJC5BQ9UF47 199 aa20.62■□□□□ 0.89
RAB5B-204ENST00000548068 BIVM-ERCC5R4GMW8 1640 aa20.55■□□□□ 0.88
RAB5B-204ENST00000548068 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
RAB5B-204ENST00000548068 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
RAB5B-204ENST00000548068 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
RAB5B-204ENST00000548068 NESP48681 1621 aa20.52■□□□□ 0.88
RAB5B-204ENST00000548068 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
RAB5B-204ENST00000548068 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
RAB5B-204ENST00000548068 CUX1P39880 1505 aa20.44■□□□□ 0.86
RAB5B-204ENST00000548068 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
RAB5B-204ENST00000548068 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
RAB5B-204ENST00000548068 EEA1Q15075 1411 aa20.37■□□□□ 0.85
RAB5B-204ENST00000548068 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
RAB5B-204ENST00000548068 SOGA1O94964 1423 aa20.25■□□□□ 0.83
RAB5B-204ENST00000548068 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
RAB5B-204ENST00000548068 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
RAB5B-204ENST00000548068 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
RAB5B-204ENST00000548068 FAM9AQ8IZU1 332 aaPredicted RBP20.22■□□□□ 0.83
RAB5B-204ENST00000548068 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
RAB5B-204ENST00000548068 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
RAB5B-204ENST00000548068 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
RAB5B-204ENST00000548068 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
RAB5B-204ENST00000548068 WDR62O43379 1518 aa20.13■□□□□ 0.81
RAB5B-204ENST00000548068 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
RAB5B-204ENST00000548068 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
RAB5B-204ENST00000548068 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
RAB5B-204ENST00000548068 KIF21BO75037 1637 aa20.1■□□□□ 0.81
RAB5B-204ENST00000548068 THOC2Q8NI27 1593 aaKnown RBP20.09■□□□□ 0.81
RAB5B-204ENST00000548068 CUX2O14529 1486 aa20.09■□□□□ 0.81
RAB5B-204ENST00000548068 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
RAB5B-204ENST00000548068 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
RAB5B-204ENST00000548068 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
RAB5B-204ENST00000548068 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.79
RAB5B-204ENST00000548068 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
RAB5B-204ENST00000548068 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
RAB5B-204ENST00000548068 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
RAB5B-204ENST00000548068 PRXQ9BXM0 1461 aa19.95■□□□□ 0.78
RAB5B-204ENST00000548068 CUL7Q14999 1698 aa19.94■□□□□ 0.78
RAB5B-204ENST00000548068 AEBP2Q6ZN18 517 aaPredicted RBP19.93■□□□□ 0.78
RAB5B-204ENST00000548068 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
RAB5B-204ENST00000548068 IGF1RP08069 1367 aa19.9■□□□□ 0.78
RAB5B-204ENST00000548068 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
RAB5B-204ENST00000548068 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
RAB5B-204ENST00000548068 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
RAB5B-204ENST00000548068 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
RAB5B-204ENST00000548068 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
RAB5B-204ENST00000548068 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
RAB5B-204ENST00000548068 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
RAB5B-204ENST00000548068 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
RAB5B-204ENST00000548068 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
RAB5B-204ENST00000548068 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
RAB5B-204ENST00000548068 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
RAB5B-204ENST00000548068 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.751e-9■■■■■ 51.2
RAB5B-204ENST00000548068 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
RAB5B-204ENST00000548068 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
RAB5B-204ENST00000548068 CTTNBP2Q8WZ74 1663 aa19.69■□□□□ 0.74
RAB5B-204ENST00000548068 CLIP1P30622 1438 aa19.67■□□□□ 0.74
RAB5B-204ENST00000548068 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
RAB5B-204ENST00000548068 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
RAB5B-204ENST00000548068 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
RAB5B-204ENST00000548068 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms