RNA–Protein interactions for RNA: ENST00000347925.9

KLHDC4-203, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene KLHDC4, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-203ENST00000347925 NISCHQ9Y2I1 1504 aa45.78■■■■■ 4.92
KLHDC4-203ENST00000347925 CCDC180Q9P1Z9 1646 aa40.26■■■■■ 4.03
KLHDC4-203ENST00000347925 ABCC9O60706 1549 aa38.86■■■■□ 3.81
KLHDC4-203ENST00000347925 ZCCHC6Q5VYS8 1495 aaKnown RBP38.25■■■■□ 3.71
KLHDC4-203ENST00000347925 DCAF8L2P0C7V8 631 aa38.13■■■■□ 3.69
KLHDC4-203ENST00000347925 DCAF1Q9Y4B6 1507 aa37.88■■■■□ 3.66
KLHDC4-203ENST00000347925 MYO15BQ96JP2 1530 aa37.79■■■■□ 3.64
KLHDC4-203ENST00000347925 NACADO15069 1562 aa37.78■■■■□ 3.64
KLHDC4-203ENST00000347925 RB1CC1Q8TDY2 1594 aa37.63■■■■□ 3.61
KLHDC4-203ENST00000347925 SCRIBQ14160 1630 aa36.86■■■■□ 3.49
KLHDC4-203ENST00000347925 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
KLHDC4-203ENST00000347925 UNC13AQ9UPW8 1703 aa36.64■■■■□ 3.46
KLHDC4-203ENST00000347925 PABPN1Q86U42 306 aaKnown RBP eCLIP36.52■■■■□ 3.44
KLHDC4-203ENST00000347925 BICRAQ9NZM4 1560 aa36.45■■■■□ 3.43
KLHDC4-203ENST00000347925 CECR2Q9BXF3 1484 aa35.61■■■■□ 3.29
KLHDC4-203ENST00000347925 EIF4G1Q04637 1599 aaKnown RBP35.44■■■■□ 3.26
KLHDC4-203ENST00000347925 BAZ1AQ9NRL2 1556 aaPredicted RBP35.42■■■■□ 3.26
KLHDC4-203ENST00000347925 SMARCA4P51532 1647 aa35.31■■■■□ 3.24
KLHDC4-203ENST00000347925 MROH2BQ7Z745 1585 aa35.29■■■■□ 3.24
KLHDC4-203ENST00000347925 RSF1Q96T23 1441 aaPredicted RBP35.19■■■■□ 3.22
KLHDC4-203ENST00000347925 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
KLHDC4-203ENST00000347925 DNAJC5BQ9UF47 199 aa35.11■■■■□ 3.21
KLHDC4-203ENST00000347925 ATAD2BQ9ULI0 1458 aa35.02■■■■□ 3.2
KLHDC4-203ENST00000347925 SMARCA2P51531 1590 aa34.97■■■■□ 3.19
KLHDC4-203ENST00000347925 PEG3Q9GZU2 1588 aa34.96■■■■□ 3.19
KLHDC4-203ENST00000347925 SUPT5HO00267 1087 aaKnown RBP34.93■■■■□ 3.18
KLHDC4-203ENST00000347925 NCAPD3P42695 1498 aa34.91■■■■□ 3.18
KLHDC4-203ENST00000347925 WIZO95785 1651 aa34.89■■■■□ 3.18
KLHDC4-203ENST00000347925 BAZ1BQ9UIG0 1483 aaKnown RBP34.75■■■■□ 3.15
KLHDC4-203ENST00000347925 HMGXB3Q12766 1538 aa34.72■■■■□ 3.15
KLHDC4-203ENST00000347925 TOP2AP11388 1531 aaKnown RBP34.58■■■■□ 3.13
KLHDC4-203ENST00000347925 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
KLHDC4-203ENST00000347925 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
KLHDC4-203ENST00000347925 CFTRP13569 1480 aa33.87■■■■□ 3.01
KLHDC4-203ENST00000347925 NESP48681 1621 aa33.82■■■■□ 3
KLHDC4-203ENST00000347925 LAMC3Q9Y6N6 1575 aa33.8■■■■□ 3
KLHDC4-203ENST00000347925 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
KLHDC4-203ENST00000347925 FANCD2Q9BXW9 1451 aa33.52■■■□□ 2.96
KLHDC4-203ENST00000347925 PRDM2Q13029 1718 aa33.45■■■□□ 2.94
KLHDC4-203ENST00000347925 ERCC6Q03468 1493 aa33.44■■■□□ 2.94
KLHDC4-203ENST00000347925 CEP164Q9UPV0 1460 aa33.4■■■□□ 2.94
KLHDC4-203ENST00000347925 KIF21AQ7Z4S6 1674 aa33.32■■■□□ 2.92
KLHDC4-203ENST00000347925 MRC2Q9UBG0 1479 aa33.2■■■□□ 2.91
KLHDC4-203ENST00000347925 WRNQ14191 1432 aaPredicted RBP eCLIP33.15■■■□□ 2.9
KLHDC4-203ENST00000347925 ABCC8Q09428 1581 aa33.15■■■□□ 2.9
KLHDC4-203ENST00000347925 URB2Q14146 1524 aaKnown RBP33.12■■■□□ 2.89
KLHDC4-203ENST00000347925 THOC2Q8NI27 1593 aaKnown RBP33.06■■■□□ 2.88
KLHDC4-203ENST00000347925 CUX1P39880 1505 aa33.05■■■□□ 2.88
KLHDC4-203ENST00000347925 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
KLHDC4-203ENST00000347925 DNMBPQ6XZF7 1577 aa33.03■■■□□ 2.88
KLHDC4-203ENST00000347925 WDR62O43379 1518 aa33.03■■■□□ 2.88
KLHDC4-203ENST00000347925 CHIC1Q5VXU3 224 aa33.01■■■□□ 2.87
KLHDC4-203ENST00000347925 TRIM41Q8WV44 630 aa32.97■■■□□ 2.87
KLHDC4-203ENST00000347925 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
KLHDC4-203ENST00000347925 TOP2BQ02880 1626 aa32.93■■■□□ 2.86
KLHDC4-203ENST00000347925 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
KLHDC4-203ENST00000347925 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
KLHDC4-203ENST00000347925 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
KLHDC4-203ENST00000347925 CUX2O14529 1486 aa32.8■■■□□ 2.84
KLHDC4-203ENST00000347925 SOGA1O94964 1423 aa32.77■■■□□ 2.84
KLHDC4-203ENST00000347925 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.82
KLHDC4-203ENST00000347925 IFT140Q96RY7 1462 aa32.68■■■□□ 2.82
KLHDC4-203ENST00000347925 TARBP1Q13395 1621 aaKnown RBP32.58■■■□□ 2.81
KLHDC4-203ENST00000347925 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
KLHDC4-203ENST00000347925 TDRD9Q8NDG6 1382 aaKnown RBP32.51■■■□□ 2.79
KLHDC4-203ENST00000347925 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
KLHDC4-203ENST00000347925 KIF27Q86VH2 1401 aa32.43■■■□□ 2.78
KLHDC4-203ENST00000347925 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.781e-8■■■□□ 16.7
KLHDC4-203ENST00000347925 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
KLHDC4-203ENST00000347925 GAPVD1Q14C86 1478 aa32.36■■■□□ 2.77
KLHDC4-203ENST00000347925 RUSC2Q8N2Y8 1516 aa32.33■■■□□ 2.77
KLHDC4-203ENST00000347925 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
KLHDC4-203ENST00000347925 EIF4G3O43432 1585 aaKnown RBP32.29■■■□□ 2.76
KLHDC4-203ENST00000347925 EEA1Q15075 1411 aa32.27■■■□□ 2.76
KLHDC4-203ENST00000347925 FAM9AQ8IZU1 332 aaPredicted RBP32.26■■■□□ 2.76
KLHDC4-203ENST00000347925 GRIN2BQ13224 1484 aa32.26■■■□□ 2.75
KLHDC4-203ENST00000347925 IGF1RP08069 1367 aa32.24■■■□□ 2.75
KLHDC4-203ENST00000347925 CSRNP3Q8WYN3 585 aa32.21■■■□□ 2.75
KLHDC4-203ENST00000347925 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
KLHDC4-203ENST00000347925 SNAPC4Q5SXM2 1469 aa32.09■■■□□ 2.73
KLHDC4-203ENST00000347925 PBRM1Q86U86 1689 aa32.09■■■□□ 2.73
KLHDC4-203ENST00000347925 MAGI1Q96QZ7 1491 aaPredicted RBP32.07■■■□□ 2.72
KLHDC4-203ENST00000347925 CARMIL1Q5VZK9 1371 aa32.06■■■□□ 2.72
KLHDC4-203ENST00000347925 FHAD1B1AJZ9 1412 aa32.02■■■□□ 2.72
KLHDC4-203ENST00000347925 CHMP7Q8WUX9 453 aaPredicted RBP31.98■■■□□ 2.71
KLHDC4-203ENST00000347925 FBLN2P98095 1184 aa31.97■■■□□ 2.71
KLHDC4-203ENST00000347925 PRXQ9BXM0 1461 aa31.96■■■□□ 2.71
KLHDC4-203ENST00000347925 CUL7Q14999 1698 aa31.96■■■□□ 2.71
KLHDC4-203ENST00000347925 SYNJ2O15056 1496 aa31.95■■■□□ 2.71
KLHDC4-203ENST00000347925 ADAMTS12P58397 1594 aa31.94■■■□□ 2.7
KLHDC4-203ENST00000347925 RAPGEF2Q9Y4G8 1499 aa31.9■■■□□ 2.7
KLHDC4-203ENST00000347925 GRIN2AQ12879 1464 aa31.82■■■□□ 2.68
KLHDC4-203ENST00000347925 EHMT2Q96KQ7 1210 aa31.79■■■□□ 2.68
KLHDC4-203ENST00000347925 KIF21BO75037 1637 aa31.79■■■□□ 2.68
KLHDC4-203ENST00000347925 GOLGA3Q08378 1498 aa31.73■■■□□ 2.67
KLHDC4-203ENST00000347925 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
KLHDC4-203ENST00000347925 UBTFP17480 764 aaKnown RBP31.7■■■□□ 2.66
KLHDC4-203ENST00000347925 CHD1O14646 1710 aa31.7■■■□□ 2.66
KLHDC4-203ENST00000347925 LOC105371045A0A1W2PR82 267 aa31.69■■■□□ 2.66
KLHDC4-203ENST00000347925 NUP160Q12769 1436 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms