RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 NISCHQ9Y2I1 1504 aa44.18■■■■■ 4.66
KLHDC4-202ENST00000316853 CCDC180Q9P1Z9 1646 aa39.33■■■■□ 3.89
KLHDC4-202ENST00000316853 ABCC9O60706 1549 aa38.66■■■■□ 3.78
KLHDC4-202ENST00000316853 DCAF8L2P0C7V8 631 aa37.11■■■■□ 3.53
KLHDC4-202ENST00000316853 RB1CC1Q8TDY2 1594 aa37.09■■■■□ 3.53
KLHDC4-202ENST00000316853 NACADO15069 1562 aa36.99■■■■□ 3.51
KLHDC4-202ENST00000316853 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
KLHDC4-202ENST00000316853 MYO15BQ96JP2 1530 aa36.65■■■■□ 3.46
KLHDC4-202ENST00000316853 DCAF1Q9Y4B6 1507 aa36.48■■■■□ 3.43
KLHDC4-202ENST00000316853 UNC13AQ9UPW8 1703 aa36.35■■■■□ 3.41
KLHDC4-202ENST00000316853 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
KLHDC4-202ENST00000316853 BICRAQ9NZM4 1560 aa35.97■■■■□ 3.35
KLHDC4-202ENST00000316853 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
KLHDC4-202ENST00000316853 DNAJC5BQ9UF47 199 aa35.57■■■■□ 3.28
KLHDC4-202ENST00000316853 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
KLHDC4-202ENST00000316853 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
KLHDC4-202ENST00000316853 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.19
KLHDC4-202ENST00000316853 CECR2Q9BXF3 1484 aa34.71■■■■□ 3.15
KLHDC4-202ENST00000316853 SMARCA4P51532 1647 aa34.33■■■■□ 3.09
KLHDC4-202ENST00000316853 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
KLHDC4-202ENST00000316853 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
KLHDC4-202ENST00000316853 NCAPD3P42695 1498 aa34.11■■■■□ 3.05
KLHDC4-202ENST00000316853 SMARCA2P51531 1590 aa34.1■■■■□ 3.05
KLHDC4-202ENST00000316853 MROH2BQ7Z745 1585 aa34.07■■■■□ 3.05
KLHDC4-202ENST00000316853 HMGXB3Q12766 1538 aa33.94■■■■□ 3.02
KLHDC4-202ENST00000316853 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
KLHDC4-202ENST00000316853 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
KLHDC4-202ENST00000316853 WIZO95785 1651 aa33.75■■■□□ 2.99
KLHDC4-202ENST00000316853 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
KLHDC4-202ENST00000316853 NESP48681 1621 aa33.42■■■□□ 2.94
KLHDC4-202ENST00000316853 ERCC6Q03468 1493 aa33.32■■■□□ 2.92
KLHDC4-202ENST00000316853 TOP2AP11388 1531 aaKnown RBP33.31■■■□□ 2.92
KLHDC4-202ENST00000316853 LAMC3Q9Y6N6 1575 aa33.26■■■□□ 2.92
KLHDC4-202ENST00000316853 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
KLHDC4-202ENST00000316853 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
KLHDC4-202ENST00000316853 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
KLHDC4-202ENST00000316853 CCDC88BA6NC98 1476 aa32.94■■■□□ 2.86
KLHDC4-202ENST00000316853 CUX2O14529 1486 aa32.93■■■□□ 2.86
KLHDC4-202ENST00000316853 CFTRP13569 1480 aa32.9■■■□□ 2.86
KLHDC4-202ENST00000316853 THOC2Q8NI27 1593 aaKnown RBP32.9■■■□□ 2.86
KLHDC4-202ENST00000316853 SUPT5HO00267 1087 aaKnown RBP32.8■■■□□ 2.84
KLHDC4-202ENST00000316853 FANCD2Q9BXW9 1451 aa32.79■■■□□ 2.84
KLHDC4-202ENST00000316853 CEP164Q9UPV0 1460 aa32.75■■■□□ 2.83
KLHDC4-202ENST00000316853 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
KLHDC4-202ENST00000316853 MRC2Q9UBG0 1479 aa32.72■■■□□ 2.83
KLHDC4-202ENST00000316853 WDR62O43379 1518 aa32.6■■■□□ 2.81
KLHDC4-202ENST00000316853 URB2Q14146 1524 aaKnown RBP32.46■■■□□ 2.79
KLHDC4-202ENST00000316853 TOPBP1Q92547 1522 aa32.25■■■□□ 2.75
KLHDC4-202ENST00000316853 ABCC8Q09428 1581 aa32.2■■■□□ 2.75
KLHDC4-202ENST00000316853 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
KLHDC4-202ENST00000316853 DNAJC5Q9H3Z4 198 aa32.1■■■□□ 2.73
KLHDC4-202ENST00000316853 IFT140Q96RY7 1462 aa32.04■■■□□ 2.72
KLHDC4-202ENST00000316853 CUX1P39880 1505 aa31.97■■■□□ 2.71
KLHDC4-202ENST00000316853 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
KLHDC4-202ENST00000316853 ZNF608Q9ULD9 1512 aaPredicted RBP31.95■■■□□ 2.71
KLHDC4-202ENST00000316853 TARBP1Q13395 1621 aaKnown RBP31.91■■■□□ 2.7
KLHDC4-202ENST00000316853 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
KLHDC4-202ENST00000316853 RAD54L2Q9Y4B4 1467 aa31.86■■■□□ 2.69
KLHDC4-202ENST00000316853 SOGA1O94964 1423 aa31.84■■■□□ 2.69
KLHDC4-202ENST00000316853 EIF4G3O43432 1585 aaKnown RBP31.83■■■□□ 2.69
KLHDC4-202ENST00000316853 AQRO60306 1485 aaKnown RBP eCLIP31.77■■■□□ 2.683e-9■■□□□ 14.2
KLHDC4-202ENST00000316853 WRNQ14191 1432 aaPredicted RBP eCLIP31.71■■■□□ 2.67
KLHDC4-202ENST00000316853 TDRD9Q8NDG6 1382 aaKnown RBP31.7■■■□□ 2.67
KLHDC4-202ENST00000316853 SYNJ1O43426 1573 aa31.67■■■□□ 2.66
KLHDC4-202ENST00000316853 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
KLHDC4-202ENST00000316853 TOP2BQ02880 1626 aa31.66■■■□□ 2.66
KLHDC4-202ENST00000316853 WDR97A6NE52 1622 aa31.63■■■□□ 2.65
KLHDC4-202ENST00000316853 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
KLHDC4-202ENST00000316853 ABCA10Q8WWZ4 1543 aa31.53■■■□□ 2.64
KLHDC4-202ENST00000316853 CHD1O14646 1710 aa31.51■■■□□ 2.63
KLHDC4-202ENST00000316853 FBLN2P98095 1184 aa31.48■■■□□ 2.63
KLHDC4-202ENST00000316853 GAPVD1Q14C86 1478 aa31.47■■■□□ 2.63
KLHDC4-202ENST00000316853 PBRM1Q86U86 1689 aa31.47■■■□□ 2.63
KLHDC4-202ENST00000316853 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
KLHDC4-202ENST00000316853 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
KLHDC4-202ENST00000316853 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
KLHDC4-202ENST00000316853 MAGI1Q96QZ7 1491 aaPredicted RBP31.37■■■□□ 2.61
KLHDC4-202ENST00000316853 CHMP7Q8WUX9 453 aaPredicted RBP31.32■■■□□ 2.6
KLHDC4-202ENST00000316853 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
KLHDC4-202ENST00000316853 ERICH3Q5RHP9 1530 aa31.15■■■□□ 2.58
KLHDC4-202ENST00000316853 ADAMTS12P58397 1594 aa31.15■■■□□ 2.58
KLHDC4-202ENST00000316853 RIMBP3CA6NJZ7 1639 aa31.14■■■□□ 2.58
KLHDC4-202ENST00000316853 RIMBP3BA6NNM3 1639 aa31.14■■■□□ 2.58
KLHDC4-202ENST00000316853 RIMBP3Q9UFD9 1639 aa31.14■■■□□ 2.58
KLHDC4-202ENST00000316853 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
KLHDC4-202ENST00000316853 ARHGEF11O15085 1522 aa31.08■■■□□ 2.57
KLHDC4-202ENST00000316853 FHAD1B1AJZ9 1412 aa31.07■■■□□ 2.57
KLHDC4-202ENST00000316853 CLASP1Q7Z460 1538 aa31.07■■■□□ 2.56
KLHDC4-202ENST00000316853 GRIN2AQ12879 1464 aa31.06■■■□□ 2.56
KLHDC4-202ENST00000316853 KIF27Q86VH2 1401 aa31.05■■■□□ 2.56
KLHDC4-202ENST00000316853 CEP170Q5SW79 1584 aa30.94■■■□□ 2.54
KLHDC4-202ENST00000316853 IGF1RP08069 1367 aa30.93■■■□□ 2.54
KLHDC4-202ENST00000316853 NUP160Q12769 1436 aa30.9■■■□□ 2.54
KLHDC4-202ENST00000316853 CUL7Q14999 1698 aa30.88■■■□□ 2.53
KLHDC4-202ENST00000316853 CYB5RLQ6IPT4 315 aa30.86■■■□□ 2.53
KLHDC4-202ENST00000316853 ARAP1Q96P48 1450 aa30.82■■■□□ 2.53
KLHDC4-202ENST00000316853 RUSC2Q8N2Y8 1516 aa30.79■■■□□ 2.52
KLHDC4-202ENST00000316853 CARMIL1Q5VZK9 1371 aa30.77■■■□□ 2.52
KLHDC4-202ENST00000316853 SHROOM2Q13796 1616 aa30.7■■■□□ 2.51
KLHDC4-202ENST00000316853 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms