RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, humanhuman

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-210ENST00000528039 NISCHQ9Y2I1 1504 aa27.9■■■□□ 2.06
RBM4-210ENST00000528039 ABCC9O60706 1549 aa25.39■■□□□ 1.66
RBM4-210ENST00000528039 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
RBM4-210ENST00000528039 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
RBM4-210ENST00000528039 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
RBM4-210ENST00000528039 NACADO15069 1562 aa23.78■■□□□ 1.4
RBM4-210ENST00000528039 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
RBM4-210ENST00000528039 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
RBM4-210ENST00000528039 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
RBM4-210ENST00000528039 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
RBM4-210ENST00000528039 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
RBM4-210ENST00000528039 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
RBM4-210ENST00000528039 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
RBM4-210ENST00000528039 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
RBM4-210ENST00000528039 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
RBM4-210ENST00000528039 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
RBM4-210ENST00000528039 CECR2Q9BXF3 1484 aa22.88■■□□□ 1.25
RBM4-210ENST00000528039 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
RBM4-210ENST00000528039 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
RBM4-210ENST00000528039 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
RBM4-210ENST00000528039 CUX2O14529 1486 aa21.94■■□□□ 1.1
RBM4-210ENST00000528039 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
RBM4-210ENST00000528039 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
RBM4-210ENST00000528039 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
RBM4-210ENST00000528039 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
RBM4-210ENST00000528039 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
RBM4-210ENST00000528039 NESP48681 1621 aa21.77■■□□□ 1.08
RBM4-210ENST00000528039 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
RBM4-210ENST00000528039 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
RBM4-210ENST00000528039 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
RBM4-210ENST00000528039 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
RBM4-210ENST00000528039 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
RBM4-210ENST00000528039 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
RBM4-210ENST00000528039 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
RBM4-210ENST00000528039 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.02
RBM4-210ENST00000528039 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
RBM4-210ENST00000528039 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
RBM4-210ENST00000528039 WIZO95785 1651 aa21.24■□□□□ 0.99
RBM4-210ENST00000528039 WDR62O43379 1518 aa21.2■□□□□ 0.98
RBM4-210ENST00000528039 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
RBM4-210ENST00000528039 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
RBM4-210ENST00000528039 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
RBM4-210ENST00000528039 CFTRP13569 1480 aa21.03■□□□□ 0.96
RBM4-210ENST00000528039 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
RBM4-210ENST00000528039 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
RBM4-210ENST00000528039 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
RBM4-210ENST00000528039 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
RBM4-210ENST00000528039 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
RBM4-210ENST00000528039 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
RBM4-210ENST00000528039 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
RBM4-210ENST00000528039 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
RBM4-210ENST00000528039 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
RBM4-210ENST00000528039 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
RBM4-210ENST00000528039 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
RBM4-210ENST00000528039 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
RBM4-210ENST00000528039 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
RBM4-210ENST00000528039 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
RBM4-210ENST00000528039 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
RBM4-210ENST00000528039 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
RBM4-210ENST00000528039 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.873e-7■■□□□ 13.9
RBM4-210ENST00000528039 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
RBM4-210ENST00000528039 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
RBM4-210ENST00000528039 CHD1O14646 1710 aa20.44■□□□□ 0.86
RBM4-210ENST00000528039 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
RBM4-210ENST00000528039 FBLN2P98095 1184 aa20.4■□□□□ 0.86
RBM4-210ENST00000528039 ARAP1Q96P48 1450 aa20.39■□□□□ 0.85
RBM4-210ENST00000528039 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
RBM4-210ENST00000528039 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
RBM4-210ENST00000528039 SOGA1O94964 1423 aa20.32■□□□□ 0.84
RBM4-210ENST00000528039 TRHP20396 242 aaPredicted RBP20.3■□□□□ 0.84
RBM4-210ENST00000528039 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.84
RBM4-210ENST00000528039 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
RBM4-210ENST00000528039 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
RBM4-210ENST00000528039 CUX1P39880 1505 aa20.22■□□□□ 0.83
RBM4-210ENST00000528039 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
RBM4-210ENST00000528039 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
RBM4-210ENST00000528039 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
RBM4-210ENST00000528039 GRIN2BQ13224 1484 aa20.17■□□□□ 0.82
RBM4-210ENST00000528039 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
RBM4-210ENST00000528039 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
RBM4-210ENST00000528039 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
RBM4-210ENST00000528039 PBRM1Q86U86 1689 aa20.05■□□□□ 0.8
RBM4-210ENST00000528039 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
RBM4-210ENST00000528039 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
RBM4-210ENST00000528039 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
RBM4-210ENST00000528039 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
RBM4-210ENST00000528039 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
RBM4-210ENST00000528039 SUPT5HO00267 1087 aaKnown RBP19.88■□□□□ 0.77
RBM4-210ENST00000528039 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
RBM4-210ENST00000528039 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
RBM4-210ENST00000528039 NUP160Q12769 1436 aa19.85■□□□□ 0.77
RBM4-210ENST00000528039 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
RBM4-210ENST00000528039 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
RBM4-210ENST00000528039 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
RBM4-210ENST00000528039 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
RBM4-210ENST00000528039 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
RBM4-210ENST00000528039 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
RBM4-210ENST00000528039 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
RBM4-210ENST00000528039 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
RBM4-210ENST00000528039 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms