Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CCNL1-207ENST00000465947 793 ntTSL 520.85■□□□□ 0.932e-7■■■□□ 18.8
XRN2Q9H0D6 CCNL1-208ENST00000466101 911 ntTSL 219.69■□□□□ 0.742e-7■■■□□ 18.8
XRN2Q9H0D6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.93■□□□□ 0.622e-7■■■□□ 18.8
XRN2Q9H0D6 CCNL1-222ENST00000479596 883 ntTSL 317.97■□□□□ 0.472e-7■■■□□ 18.8
XRN2Q9H0D6 CCNL1-213ENST00000471044 753 ntTSL 214.88□□□□□ -0.032e-7■■■□□ 18.8
XRN2Q9H0D6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.058e-10■■■□□ 18.8
XRN2Q9H0D6 TCAF1-204ENST00000478172 576 ntTSL 413.09□□□□□ -0.318e-10■■■□□ 18.8
XRN2Q9H0D6 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.948e-10■■■□□ 18.8
XRN2Q9H0D6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.88■■■□□ 2.373e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-222ENST00000630907 889 ntTSL 529.72■■■□□ 2.353e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-213ENST00000626793 733 ntTSL 528■■■□□ 2.073e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-208ENST00000625681 654 ntTSL 528■■■□□ 2.073e-16■■■□□ 18.7
XRN2Q9H0D6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.693e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-218ENST00000629252 1112 ntTSL 525.02■■□□□ 1.63e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-215ENST00000628267 779 ntTSL 524.74■■□□□ 1.553e-16■■■□□ 18.7
XRN2Q9H0D6 MBD3-205ENST00000589064 1475 ntTSL 224.62■■□□□ 1.533e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-214ENST00000627018 474 ntTSL 324.02■■□□□ 1.443e-16■■■□□ 18.7
XRN2Q9H0D6 PIK3R2-205ENST00000474310 425 ntTSL 323.95■■□□□ 1.423e-16■■■□□ 18.7
XRN2Q9H0D6 MBD3-209ENST00000592012 2379 ntTSL 520.04■□□□□ 0.83e-16■■■□□ 18.7
XRN2Q9H0D6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.693e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.473e-16■■■□□ 18.7
XRN2Q9H0D6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.393e-16■■■□□ 18.7
XRN2Q9H0D6 PIK3R2-202ENST00000426902 3273 ntTSL 216.57■□□□□ 0.243e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.043e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.093e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.113e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.153e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.91□□□□□ -0.183e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.17□□□□□ -0.33e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.343e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.373e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.163e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-219ENST00000629886 436 ntTSL 36.34□□□□□ -1.393e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.573e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.33□□□□□ -1.723e-16■■■□□ 18.7
XRN2Q9H0D6 UBE3A-216ENST00000628733 706 ntTSL 52.6□□□□□ -1.993e-16■■■□□ 18.7
XRN2Q9H0D6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.1■□□□□ 0.971e-6■■■□□ 18.7
XRN2Q9H0D6 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.251e-6■■■□□ 18.7
XRN2Q9H0D6 PTP4A1-203ENST00000473334 638 ntTSL 326.77■■□□□ 1.886e-10■■■□□ 18.7
XRN2Q9H0D6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.116e-7■■■□□ 18.7
XRN2Q9H0D6 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.246e-7■■■□□ 18.7
XRN2Q9H0D6 POLG-213ENST00000631044 4668 ntTSL 512.82□□□□□ -0.366e-7■■■□□ 18.7
XRN2Q9H0D6 POLG-217ENST00000636774 4151 ntTSL 511.93□□□□□ -0.56e-7■■■□□ 18.7
XRN2Q9H0D6 AKAP1-210ENST00000572814 532 ntTSL 413.73□□□□□ -0.216e-7■■■□□ 18.7
XRN2Q9H0D6 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.824e-6■■■□□ 18.7
XRN2Q9H0D6 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.834e-6■■■□□ 18.7
XRN2Q9H0D6 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)16.28■□□□□ 0.23e-6■■■□□ 18.7
XRN2Q9H0D6 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.959e-7■■■□□ 18.7
XRN2Q9H0D6 ARID3A-205ENST00000587532 1016 ntTSL 522.53■■□□□ 1.26e-7■■■□□ 18.6
XRN2Q9H0D6 ARID3A-202ENST00000457152 549 ntTSL 516.09■□□□□ 0.175e-7■■■□□ 18.6
XRN2Q9H0D6 COL18A1-201ENST00000342220 3386 ntTSL 213.65□□□□□ -0.221e-6■■■□□ 18.6
XRN2Q9H0D6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.12e-6■■■□□ 18.6
XRN2Q9H0D6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.212e-6■■■□□ 18.6
XRN2Q9H0D6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.97■■■□□ 2.715e-6■■■□□ 18.6
XRN2Q9H0D6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.27■■■□□ 2.447e-7■■■□□ 18.6
XRN2Q9H0D6 MSANTD2-207ENST00000634413 599 ntTSL 526.33■■□□□ 1.815e-6■■■□□ 18.6
XRN2Q9H0D6 MSANTD2-205ENST00000527140 775 ntTSL 326.33■■□□□ 1.815e-6■■■□□ 18.6
XRN2Q9H0D6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.11■■□□□ 1.613e-6■■■□□ 18.6
XRN2Q9H0D6 EXD3-205ENST00000475006 1132 ntTSL 325.11■■□□□ 1.613e-6■■■□□ 18.6
XRN2Q9H0D6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.73■■□□□ 1.555e-6■■■□□ 18.6
XRN2Q9H0D6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.98■■□□□ 1.433e-6■■■□□ 18.6
XRN2Q9H0D6 BAIAP2-227ENST00000576470 593 ntTSL 223.77■■□□□ 1.47e-7■■■□□ 18.6
XRN2Q9H0D6 BAIAP2-224ENST00000575989 565 ntTSL 423.44■■□□□ 1.347e-7■■■□□ 18.6
XRN2Q9H0D6 KLF3-AS1-201ENST00000436901 1896 ntTSL 222.91■■□□□ 1.263e-6■■■□□ 18.6
XRN2Q9H0D6 AHDC1-203ENST00000480033 546 ntTSL 522.04■■□□□ 1.121e-7■■■□□ 18.6
XRN2Q9H0D6 EXD3-202ENST00000460390 1432 ntTSL 221.88■■□□□ 1.093e-6■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.54■■□□□ 1.041e-6■■■□□ 18.6
XRN2Q9H0D6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.865e-6■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-204ENST00000562586 578 ntTSL 219.34■□□□□ 0.691e-6■■■□□ 18.6
XRN2Q9H0D6 BRF1-220ENST00000552127 778 ntTSL 419.12■□□□□ 0.657e-7■■■□□ 18.6
XRN2Q9H0D6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.03■□□□□ 0.641e-9■■■□□ 18.6
XRN2Q9H0D6 AHDC1-205ENST00000490295 511 ntTSL 518.37■□□□□ 0.531e-7■■■□□ 18.6
XRN2Q9H0D6 BAIAP2-206ENST00000570913 559 ntTSL 417.84■□□□□ 0.457e-7■■■□□ 18.6
XRN2Q9H0D6 BAIAP2-221ENST00000575750 584 ntTSL 417.7■□□□□ 0.427e-7■■■□□ 18.6
XRN2Q9H0D6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.382e-6■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.321e-6■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-211ENST00000568117 521 ntTSL 317.05■□□□□ 0.321e-6■■■□□ 18.6
XRN2Q9H0D6 WAC-220ENST00000532233 543 ntTSL 416.67■□□□□ 0.261e-9■■■□□ 18.6
XRN2Q9H0D6 CARHSP1-210ENST00000567908 565 ntTSL 216.65■□□□□ 0.261e-6■■■□□ 18.6
XRN2Q9H0D6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.61■□□□□ 0.251e-9■■■□□ 18.6
XRN2Q9H0D6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.6■□□□□ 0.253e-6■■■□□ 18.6
XRN2Q9H0D6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.6■□□□□ 0.253e-6■■■□□ 18.6
XRN2Q9H0D6 WAC-218ENST00000528491 507 ntTSL 416.51■□□□□ 0.231e-9■■■□□ 18.6
XRN2Q9H0D6 WAC-217ENST00000526722 585 ntTSL 416.51■□□□□ 0.231e-9■■■□□ 18.6
XRN2Q9H0D6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.221e-7■■■□□ 18.6
XRN2Q9H0D6 WAC-207ENST00000420266 784 ntTSL 516.34■□□□□ 0.211e-9■■■□□ 18.6
XRN2Q9H0D6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.183e-6■■■□□ 18.6
XRN2Q9H0D6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.05■□□□□ 0.167e-7■■■□□ 18.6
XRN2Q9H0D6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.78■□□□□ 0.127e-7■■■□□ 18.6
XRN2Q9H0D6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.65■□□□□ 0.17e-7■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.34■□□□□ 0.055e-6■■■□□ 18.6
XRN2Q9H0D6 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.34■□□□□ 0.055e-6■■■□□ 18.6
XRN2Q9H0D6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.29■□□□□ 0.047e-7■■■□□ 18.6
XRN2Q9H0D6 BRF1-207ENST00000546417 554 ntTSL 315.21■□□□□ 0.037e-7■■■□□ 18.6
XRN2Q9H0D6 BAIAP2-215ENST00000573894 657 ntTSL 315.16■□□□□ 0.027e-7■■■□□ 18.6
XRN2Q9H0D6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.011e-7■■■□□ 18.6
XRN2Q9H0D6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.041e-9■■■□□ 18.6
XRN2Q9H0D6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.072e-6■■■□□ 18.6
XRN2Q9H0D6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.117e-7■■■□□ 18.6
XRN2Q9H0D6 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC13.84□□□□□ -0.193e-6■■■□□ 18.6
Retrieved 100 of 21,068 protein–RNA pairs in 121.6 ms