RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
UBE3A-220ENST00000630424 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
UBE3A-220ENST00000630424 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
UBE3A-220ENST00000630424 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
UBE3A-220ENST00000630424 NISCHQ9Y2I1 1504 aa22.9■■□□□ 1.26
UBE3A-220ENST00000630424 APLP2Q06481 763 aa22.49■■□□□ 1.19
UBE3A-220ENST00000630424 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
UBE3A-220ENST00000630424 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
UBE3A-220ENST00000630424 RANGAP1P46060 587 aaPredicted RBP22.05■■□□□ 1.12
UBE3A-220ENST00000630424 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
UBE3A-220ENST00000630424 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
UBE3A-220ENST00000630424 PCGF6Q9BYE7 350 aa21.69■■□□□ 1.06
UBE3A-220ENST00000630424 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
UBE3A-220ENST00000630424 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
UBE3A-220ENST00000630424 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
UBE3A-220ENST00000630424 MYT1LQ9UL68 1186 aa21.28■■□□□ 1
UBE3A-220ENST00000630424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
UBE3A-220ENST00000630424 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
UBE3A-220ENST00000630424 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
UBE3A-220ENST00000630424 ERICH6Q7L0X2 663 aa21.11■□□□□ 0.97
UBE3A-220ENST00000630424 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
UBE3A-220ENST00000630424 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.96
UBE3A-220ENST00000630424 ITGAEP38570 1179 aa20.98■□□□□ 0.95
UBE3A-220ENST00000630424 NEFLP07196 543 aa20.93■□□□□ 0.94
UBE3A-220ENST00000630424 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
UBE3A-220ENST00000630424 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.94
UBE3A-220ENST00000630424 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
UBE3A-220ENST00000630424 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
UBE3A-220ENST00000630424 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
UBE3A-220ENST00000630424 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
UBE3A-220ENST00000630424 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.88
UBE3A-220ENST00000630424 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
UBE3A-220ENST00000630424 ABCC9O60706 1549 aa20.44■□□□□ 0.86
UBE3A-220ENST00000630424 FBLN2P98095 1184 aa20.43■□□□□ 0.86
UBE3A-220ENST00000630424 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
UBE3A-220ENST00000630424 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
UBE3A-220ENST00000630424 TRIM52Q96A61 297 aa20.31■□□□□ 0.84
UBE3A-220ENST00000630424 HRCP23327 699 aa20.21■□□□□ 0.83
UBE3A-220ENST00000630424 ZNF326Q5BKZ1 582 aaKnown RBP20.14■□□□□ 0.81
UBE3A-220ENST00000630424 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
UBE3A-220ENST00000630424 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
UBE3A-220ENST00000630424 BCANQ96GW7 911 aa20.09■□□□□ 0.81
UBE3A-220ENST00000630424 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
UBE3A-220ENST00000630424 SLC24A1O60721 1099 aa20■□□□□ 0.79
UBE3A-220ENST00000630424 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
UBE3A-220ENST00000630424 MYT1Q01538 1121 aa19.9■□□□□ 0.78
UBE3A-220ENST00000630424 ESF1Q9H501 851 aaKnown RBP19.89■□□□□ 0.78
UBE3A-220ENST00000630424 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.78
UBE3A-220ENST00000630424 ZNF316A6NFI3 1004 aaPredicted RBP19.88■□□□□ 0.77
UBE3A-220ENST00000630424 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
UBE3A-220ENST00000630424 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
UBE3A-220ENST00000630424 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
UBE3A-220ENST00000630424 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.77
UBE3A-220ENST00000630424 NEFMP07197 916 aa19.79■□□□□ 0.76
UBE3A-220ENST00000630424 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
UBE3A-220ENST00000630424 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
UBE3A-220ENST00000630424 ANP32CO43423 234 aa19.72■□□□□ 0.75
UBE3A-220ENST00000630424 STAG3Q9UJ98 1225 aa19.71■□□□□ 0.75
UBE3A-220ENST00000630424 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
UBE3A-220ENST00000630424 RTL5Q5HYW3 569 aaPredicted RBP19.7■□□□□ 0.74
UBE3A-220ENST00000630424 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
UBE3A-220ENST00000630424 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
UBE3A-220ENST00000630424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.79e-8■■■□□ 14.6
UBE3A-220ENST00000630424 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
UBE3A-220ENST00000630424 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
UBE3A-220ENST00000630424 CHIC2Q9UKJ5 165 aa19.36■□□□□ 0.69
UBE3A-220ENST00000630424 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
UBE3A-220ENST00000630424 TSPY4P0CV99 314 aa19.33■□□□□ 0.68
UBE3A-220ENST00000630424 TSPY10P0CW01 314 aa19.33■□□□□ 0.68
UBE3A-220ENST00000630424 A0A0G2JS52 829 aa19.31■□□□□ 0.68
UBE3A-220ENST00000630424 TONSLQ96HA7 1378 aa19.31■□□□□ 0.68
UBE3A-220ENST00000630424 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
UBE3A-220ENST00000630424 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
UBE3A-220ENST00000630424 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
UBE3A-220ENST00000630424 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
UBE3A-220ENST00000630424 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
UBE3A-220ENST00000630424 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
UBE3A-220ENST00000630424 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
UBE3A-220ENST00000630424 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
UBE3A-220ENST00000630424 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
UBE3A-220ENST00000630424 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
UBE3A-220ENST00000630424 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
UBE3A-220ENST00000630424 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
UBE3A-220ENST00000630424 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
UBE3A-220ENST00000630424 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
UBE3A-220ENST00000630424 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
UBE3A-220ENST00000630424 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
UBE3A-220ENST00000630424 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
UBE3A-220ENST00000630424 ANP32AP39687 249 aaKnown RBP19.08■□□□□ 0.65
UBE3A-220ENST00000630424 PLEKHD1A6NEE1 506 aa19.05■□□□□ 0.64
UBE3A-220ENST00000630424 WDR43Q15061 677 aaKnown RBP eCLIP19.05■□□□□ 0.641e-6■□□□□ 10.7
UBE3A-220ENST00000630424 HAP1P54257 671 aaPredicted RBP19.03■□□□□ 0.64
UBE3A-220ENST00000630424 UPF2Q9HAU5 1272 aaKnown RBP19.01■□□□□ 0.63
UBE3A-220ENST00000630424 RRP7BPQ9NSQ0 103 aa18.99■□□□□ 0.63
UBE3A-220ENST00000630424 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.97■□□□□ 0.63
UBE3A-220ENST00000630424 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
UBE3A-220ENST00000630424 FKBP8Q14318 412 aa18.94■□□□□ 0.62
UBE3A-220ENST00000630424 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
UBE3A-220ENST00000630424 ANP32BQ92688 251 aaKnown RBP18.89■□□□□ 0.61
UBE3A-220ENST00000630424 ARXQ96QS3 562 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms