RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
UBE3A-205ENST00000566215 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
UBE3A-205ENST00000566215 ABCC9O60706 1549 aa14.8□□□□□ -0.04
UBE3A-205ENST00000566215 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.08
UBE3A-205ENST00000566215 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
UBE3A-205ENST00000566215 NACADO15069 1562 aa14.46□□□□□ -0.09
UBE3A-205ENST00000566215 SHROOM4Q9ULL8 1493 aa14.35□□□□□ -0.11
UBE3A-205ENST00000566215 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
UBE3A-205ENST00000566215 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
UBE3A-205ENST00000566215 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
UBE3A-205ENST00000566215 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
UBE3A-205ENST00000566215 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
UBE3A-205ENST00000566215 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
UBE3A-205ENST00000566215 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
UBE3A-205ENST00000566215 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
UBE3A-205ENST00000566215 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBE3A-205ENST00000566215 CUX2O14529 1486 aa13.43□□□□□ -0.26
UBE3A-205ENST00000566215 SCRIBQ14160 1630 aa13.38□□□□□ -0.27
UBE3A-205ENST00000566215 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
UBE3A-205ENST00000566215 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
UBE3A-205ENST00000566215 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
UBE3A-205ENST00000566215 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
UBE3A-205ENST00000566215 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
UBE3A-205ENST00000566215 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
UBE3A-205ENST00000566215 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
UBE3A-205ENST00000566215 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
UBE3A-205ENST00000566215 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
UBE3A-205ENST00000566215 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
UBE3A-205ENST00000566215 BAZ1AQ9NRL2 1556 aaPredicted RBP12.95□□□□□ -0.34
UBE3A-205ENST00000566215 ERCC6Q03468 1493 aa12.87□□□□□ -0.35
UBE3A-205ENST00000566215 WDR62O43379 1518 aa12.85□□□□□ -0.35
UBE3A-205ENST00000566215 KIF21AQ7Z4S6 1674 aa12.83□□□□□ -0.36
UBE3A-205ENST00000566215 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
UBE3A-205ENST00000566215 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
UBE3A-205ENST00000566215 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
UBE3A-205ENST00000566215 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
UBE3A-205ENST00000566215 NESP48681 1621 aa12.67□□□□□ -0.38
UBE3A-205ENST00000566215 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
UBE3A-205ENST00000566215 WDR97A6NE52 1622 aa12.58□□□□□ -0.39
UBE3A-205ENST00000566215 MROH2BQ7Z745 1585 aa12.58□□□□□ -0.4
UBE3A-205ENST00000566215 CFTRP13569 1480 aa12.55□□□□□ -0.4
UBE3A-205ENST00000566215 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
UBE3A-205ENST00000566215 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
UBE3A-205ENST00000566215 ABCC8Q09428 1581 aa12.45□□□□□ -0.42
UBE3A-205ENST00000566215 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
UBE3A-205ENST00000566215 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
UBE3A-205ENST00000566215 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
UBE3A-205ENST00000566215 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
UBE3A-205ENST00000566215 WIZO95785 1651 aa12.43□□□□□ -0.42
UBE3A-205ENST00000566215 IFT140Q96RY7 1462 aa12.4□□□□□ -0.42
UBE3A-205ENST00000566215 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
UBE3A-205ENST00000566215 RSF1Q96T23 1441 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-205ENST00000566215 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
UBE3A-205ENST00000566215 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
UBE3A-205ENST00000566215 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
UBE3A-205ENST00000566215 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
UBE3A-205ENST00000566215 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
UBE3A-205ENST00000566215 CHD1O14646 1710 aa12.26□□□□□ -0.45
UBE3A-205ENST00000566215 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
UBE3A-205ENST00000566215 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
UBE3A-205ENST00000566215 MAGI1Q96QZ7 1491 aaPredicted RBP12.13□□□□□ -0.47
UBE3A-205ENST00000566215 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
UBE3A-205ENST00000566215 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
UBE3A-205ENST00000566215 ZNF608Q9ULD9 1512 aaPredicted RBP12.1□□□□□ -0.47
UBE3A-205ENST00000566215 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
UBE3A-205ENST00000566215 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
UBE3A-205ENST00000566215 SHROOM2Q13796 1616 aa12.07□□□□□ -0.48
UBE3A-205ENST00000566215 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
UBE3A-205ENST00000566215 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
UBE3A-205ENST00000566215 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-205ENST00000566215 SYNJ2O15056 1496 aa12□□□□□ -0.49
UBE3A-205ENST00000566215 GRIN2BQ13224 1484 aa11.98□□□□□ -0.49
UBE3A-205ENST00000566215 ABCA10Q8WWZ4 1543 aa11.95□□□□□ -0.5
UBE3A-205ENST00000566215 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
UBE3A-205ENST00000566215 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
UBE3A-205ENST00000566215 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
UBE3A-205ENST00000566215 KIF13AQ9H1H9 1805 aa11.9□□□□□ -0.5
UBE3A-205ENST00000566215 CUX1P39880 1505 aa11.9□□□□□ -0.51
UBE3A-205ENST00000566215 NUP160Q12769 1436 aa11.89□□□□□ -0.51
UBE3A-205ENST00000566215 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
UBE3A-205ENST00000566215 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■■□ 21.4
UBE3A-205ENST00000566215 SOGA1O94964 1423 aa11.87□□□□□ -0.51
UBE3A-205ENST00000566215 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
UBE3A-205ENST00000566215 MAPKBP1O60336 1514 aa11.86□□□□□ -0.51
UBE3A-205ENST00000566215 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
UBE3A-205ENST00000566215 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
UBE3A-205ENST00000566215 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
UBE3A-205ENST00000566215 GRIN2AQ12879 1464 aa11.81□□□□□ -0.52
UBE3A-205ENST00000566215 RAD54L2Q9Y4B4 1467 aa11.78□□□□□ -0.52
UBE3A-205ENST00000566215 RUSC2Q8N2Y8 1516 aa11.75□□□□□ -0.53
UBE3A-205ENST00000566215 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
UBE3A-205ENST00000566215 GLI2P10070 1586 aa11.74□□□□□ -0.53
UBE3A-205ENST00000566215 DIP2BQ9P265 1576 aa11.73□□□□□ -0.53
UBE3A-205ENST00000566215 CUL7Q14999 1698 aa11.7□□□□□ -0.54
UBE3A-205ENST00000566215 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
UBE3A-205ENST00000566215 ABCC10Q5T3U5 1492 aa11.7□□□□□ -0.54
UBE3A-205ENST00000566215 TDRD9Q8NDG6 1382 aaKnown RBP11.66□□□□□ -0.54
UBE3A-205ENST00000566215 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
UBE3A-205ENST00000566215 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.545e-6■■■■■ 29.2
UBE3A-205ENST00000566215 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms