RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
UBE3A-204ENST00000438097 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
UBE3A-204ENST00000438097 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
UBE3A-204ENST00000438097 APLP2Q06481 763 aa21.98■■□□□ 1.11
UBE3A-204ENST00000438097 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
UBE3A-204ENST00000438097 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
UBE3A-204ENST00000438097 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
UBE3A-204ENST00000438097 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
UBE3A-204ENST00000438097 CENPBP07199 599 aaPredicted RBP21.21■□□□□ 0.99
UBE3A-204ENST00000438097 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
UBE3A-204ENST00000438097 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
UBE3A-204ENST00000438097 MYT1Q01538 1121 aa21.06■□□□□ 0.96
UBE3A-204ENST00000438097 NEFLP07196 543 aa21.05■□□□□ 0.96
UBE3A-204ENST00000438097 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
UBE3A-204ENST00000438097 YTHDC1Q96MU7 727 aaKnown RBP20.97■□□□□ 0.95
UBE3A-204ENST00000438097 DAXXQ9UER7 740 aaPredicted RBP20.84■□□□□ 0.93
UBE3A-204ENST00000438097 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
UBE3A-204ENST00000438097 PCGF6Q9BYE7 350 aa20.66■□□□□ 0.9
UBE3A-204ENST00000438097 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
UBE3A-204ENST00000438097 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
UBE3A-204ENST00000438097 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
UBE3A-204ENST00000438097 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
UBE3A-204ENST00000438097 MYT1LQ9UL68 1186 aa20.39■□□□□ 0.85
UBE3A-204ENST00000438097 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
UBE3A-204ENST00000438097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.8
UBE3A-204ENST00000438097 HNRNPUL2Q1KMD3 747 aaKnown RBP20.08■□□□□ 0.8
UBE3A-204ENST00000438097 RTL5Q5HYW3 569 aaPredicted RBP20.06■□□□□ 0.8
UBE3A-204ENST00000438097 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
UBE3A-204ENST00000438097 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
UBE3A-204ENST00000438097 POLR3GLQ9BT43 218 aa20■□□□□ 0.79
UBE3A-204ENST00000438097 ZBTB47Q9UFB7 747 aaPredicted RBP19.94■□□□□ 0.78
UBE3A-204ENST00000438097 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
UBE3A-204ENST00000438097 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
UBE3A-204ENST00000438097 NEFMP07197 916 aa19.7■□□□□ 0.74
UBE3A-204ENST00000438097 ITGAEP38570 1179 aa19.68■□□□□ 0.74
UBE3A-204ENST00000438097 CANXP27824 592 aaKnown RBP19.49■□□□□ 0.71
UBE3A-204ENST00000438097 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
UBE3A-204ENST00000438097 ANP32BQ92688 251 aaKnown RBP19.46■□□□□ 0.71
UBE3A-204ENST00000438097 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
UBE3A-204ENST00000438097 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
UBE3A-204ENST00000438097 HRCP23327 699 aa19.36■□□□□ 0.69
UBE3A-204ENST00000438097 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
UBE3A-204ENST00000438097 FAM50AQ14320 339 aaKnown RBP19.35■□□□□ 0.69
UBE3A-204ENST00000438097 BCANQ96GW7 911 aa19.34■□□□□ 0.69
UBE3A-204ENST00000438097 TRIM52Q96A61 297 aa19.34■□□□□ 0.69
UBE3A-204ENST00000438097 ANP32CO43423 234 aa19.3■□□□□ 0.68
UBE3A-204ENST00000438097 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
UBE3A-204ENST00000438097 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
UBE3A-204ENST00000438097 ANP32AP39687 249 aaKnown RBP19.22■□□□□ 0.67
UBE3A-204ENST00000438097 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
UBE3A-204ENST00000438097 CDK11BP21127 795 aaKnown RBP19.2■□□□□ 0.66
UBE3A-204ENST00000438097 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
UBE3A-204ENST00000438097 GLIPR1L2Q4G1C9 344 aa19.15■□□□□ 0.66
UBE3A-204ENST00000438097 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
UBE3A-204ENST00000438097 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
UBE3A-204ENST00000438097 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
UBE3A-204ENST00000438097 FBLN2P98095 1184 aa18.96■□□□□ 0.63
UBE3A-204ENST00000438097 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
UBE3A-204ENST00000438097 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
UBE3A-204ENST00000438097 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
UBE3A-204ENST00000438097 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.83■□□□□ 0.6
UBE3A-204ENST00000438097 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
UBE3A-204ENST00000438097 NPM1P06748 294 aaKnown RBP eCLIP18.77■□□□□ 0.6
UBE3A-204ENST00000438097 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
UBE3A-204ENST00000438097 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
UBE3A-204ENST00000438097 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
UBE3A-204ENST00000438097 ABCC9O60706 1549 aa18.67■□□□□ 0.58
UBE3A-204ENST00000438097 ZRSR1Q15695 479 aaKnown RBP18.65■□□□□ 0.58
UBE3A-204ENST00000438097 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
UBE3A-204ENST00000438097 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
UBE3A-204ENST00000438097 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
UBE3A-204ENST00000438097 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■□□□□ 10.7
UBE3A-204ENST00000438097 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
UBE3A-204ENST00000438097 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
UBE3A-204ENST00000438097 GTF3C3Q9Y5Q9 886 aa18.59■□□□□ 0.57
UBE3A-204ENST00000438097 CASC1Q6TDU7 716 aa18.58■□□□□ 0.56
UBE3A-204ENST00000438097 CHGAP10645 457 aaKnown RBP18.57■□□□□ 0.56
UBE3A-204ENST00000438097 GOLGA6L22H0YM25 854 aa18.57■□□□□ 0.56
UBE3A-204ENST00000438097 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
UBE3A-204ENST00000438097 BECN1Q14457 450 aa18.56■□□□□ 0.56
UBE3A-204ENST00000438097 A0A0G2JS52 829 aa18.51■□□□□ 0.55
UBE3A-204ENST00000438097 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
UBE3A-204ENST00000438097 TRIM44Q96DX7 344 aaPredicted RBP18.49■□□□□ 0.55
UBE3A-204ENST00000438097 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
UBE3A-204ENST00000438097 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
UBE3A-204ENST00000438097 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
UBE3A-204ENST00000438097 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
UBE3A-204ENST00000438097 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
UBE3A-204ENST00000438097 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
UBE3A-204ENST00000438097 HAP1P54257 671 aaPredicted RBP18.4■□□□□ 0.54
UBE3A-204ENST00000438097 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
UBE3A-204ENST00000438097 NRDCO43847 1150 aa18.38■□□□□ 0.53
UBE3A-204ENST00000438097 HNRNPUQ00839 825 aaKnown RBP eCLIP18.38■□□□□ 0.53
UBE3A-204ENST00000438097 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
UBE3A-204ENST00000438097 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
UBE3A-204ENST00000438097 NPHP1O15259 732 aa18.35■□□□□ 0.53
UBE3A-204ENST00000438097 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
UBE3A-204ENST00000438097 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
UBE3A-204ENST00000438097 TSPY4P0CV99 314 aa18.33■□□□□ 0.52
UBE3A-204ENST00000438097 TSPY10P0CW01 314 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms