RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 NISCHQ9Y2I1 1504 aa50.79■■■■■ 5.72
MBD3-205ENST00000589064 CCDC180Q9P1Z9 1646 aa45.12■■■■■ 4.81
MBD3-205ENST00000589064 ABCC9O60706 1549 aa44.8■■■■■ 4.76
MBD3-205ENST00000589064 DCAF8L2P0C7V8 631 aa42.88■■■■■ 4.46
MBD3-205ENST00000589064 RB1CC1Q8TDY2 1594 aa42.78■■■■■ 4.44
MBD3-205ENST00000589064 NACADO15069 1562 aa42.64■■■■■ 4.42
MBD3-205ENST00000589064 MYO15BQ96JP2 1530 aa42.24■■■■■ 4.35
MBD3-205ENST00000589064 ZCCHC6Q5VYS8 1495 aaKnown RBP42.19■■■■■ 4.34
MBD3-205ENST00000589064 PABPN1Q86U42 306 aaKnown RBP eCLIP41.95■■■■■ 4.311e-6■■■□□ 17
MBD3-205ENST00000589064 DCAF1Q9Y4B6 1507 aa41.93■■■■■ 4.3
MBD3-205ENST00000589064 UNC13AQ9UPW8 1703 aa41.66■■■■■ 4.26
MBD3-205ENST00000589064 DNAJC5BQ9UF47 199 aa41.63■■■■■ 4.25
MBD3-205ENST00000589064 BICRAQ9NZM4 1560 aa41.52■■■■■ 4.24
MBD3-205ENST00000589064 SCRIBQ14160 1630 aa41.3■■■■■ 4.2
MBD3-205ENST00000589064 SHROOM4Q9ULL8 1493 aa40.97■■■■■ 4.15
MBD3-205ENST00000589064 EIF4G1Q04637 1599 aaKnown RBP40.46■■■■■ 4.07
MBD3-205ENST00000589064 CC2D2AQ9P2K1 1620 aa40.4■■■■■ 4.06
MBD3-205ENST00000589064 CECR2Q9BXF3 1484 aa40.27■■■■■ 4.04
MBD3-205ENST00000589064 NCAPD3P42695 1498 aa39.45■■■■□ 3.91
MBD3-205ENST00000589064 SMARCA4P51532 1647 aa39.43■■■■□ 3.9
MBD3-205ENST00000589064 ATAD2BQ9ULI0 1458 aa39.41■■■■□ 3.9
MBD3-205ENST00000589064 BAZ1AQ9NRL2 1556 aaPredicted RBP39.35■■■■□ 3.89
MBD3-205ENST00000589064 SMARCA2P51531 1590 aa39.26■■■■□ 3.88
MBD3-205ENST00000589064 MROH2BQ7Z745 1585 aa39.17■■■■□ 3.86
MBD3-205ENST00000589064 HMGXB3Q12766 1538 aa39.1■■■■□ 3.85
MBD3-205ENST00000589064 BAZ1BQ9UIG0 1483 aaKnown RBP39.04■■■■□ 3.84
MBD3-205ENST00000589064 PEG3Q9GZU2 1588 aa39.02■■■■□ 3.84
MBD3-205ENST00000589064 WIZO95785 1651 aa38.66■■■■□ 3.78
MBD3-205ENST00000589064 NESP48681 1621 aa38.65■■■■□ 3.78
MBD3-205ENST00000589064 RSF1Q96T23 1441 aaPredicted RBP38.63■■■■□ 3.77
MBD3-205ENST00000589064 ERCC6Q03468 1493 aa38.62■■■■□ 3.77
MBD3-205ENST00000589064 LAMC3Q9Y6N6 1575 aa38.36■■■■□ 3.73
MBD3-205ENST00000589064 CADPSQ9ULU8 1353 aa38.33■■■■□ 3.73
MBD3-205ENST00000589064 CUX2O14529 1486 aa38.28■■■■□ 3.72
MBD3-205ENST00000589064 PDS5BQ9NTI5 1447 aa38.24■■■■□ 3.71
MBD3-205ENST00000589064 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
MBD3-205ENST00000589064 KIF21AQ7Z4S6 1674 aa37.99■■■■□ 3.67
MBD3-205ENST00000589064 THOC2Q8NI27 1593 aaKnown RBP37.98■■■■□ 3.67
MBD3-205ENST00000589064 CFTRP13569 1480 aa37.96■■■■□ 3.67
MBD3-205ENST00000589064 CCDC88BA6NC98 1476 aa37.88■■■■□ 3.65
MBD3-205ENST00000589064 FANCD2Q9BXW9 1451 aa37.84■■■■□ 3.65
MBD3-205ENST00000589064 MRC2Q9UBG0 1479 aa37.82■■■■□ 3.65
MBD3-205ENST00000589064 CEP164Q9UPV0 1460 aa37.79■■■■□ 3.64
MBD3-205ENST00000589064 DNAJC5Q9H3Z4 198 aa37.75■■■■□ 3.63
MBD3-205ENST00000589064 WDR62O43379 1518 aa37.65■■■■□ 3.62
MBD3-205ENST00000589064 SUPT5HO00267 1087 aaKnown RBP37.53■■■■□ 3.6
MBD3-205ENST00000589064 URB2Q14146 1524 aaKnown RBP37.48■■■■□ 3.59
MBD3-205ENST00000589064 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
MBD3-205ENST00000589064 TOPBP1Q92547 1522 aa37.17■■■■□ 3.54
MBD3-205ENST00000589064 ABCC8Q09428 1581 aa37.12■■■■□ 3.53
MBD3-205ENST00000589064 IFT140Q96RY7 1462 aa37.04■■■■□ 3.52
MBD3-205ENST00000589064 DNMBPQ6XZF7 1577 aa37.02■■■■□ 3.52
MBD3-205ENST00000589064 ZNF608Q9ULD9 1512 aaPredicted RBP36.94■■■■□ 3.5
MBD3-205ENST00000589064 POLA1P09884 1462 aaPredicted RBP36.84■■■■□ 3.49
MBD3-205ENST00000589064 OSCARQ8IYS5 282 aa36.82■■■■□ 3.48
MBD3-205ENST00000589064 SOGA1O94964 1423 aa36.77■■■■□ 3.48
MBD3-205ENST00000589064 RAD54L2Q9Y4B4 1467 aa36.75■■■■□ 3.47
MBD3-205ENST00000589064 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.477e-7■■■□□ 18.2
MBD3-205ENST00000589064 CUX1P39880 1505 aa36.74■■■■□ 3.47
MBD3-205ENST00000589064 TARBP1Q13395 1621 aaKnown RBP36.73■■■■□ 3.47
MBD3-205ENST00000589064 FGD5Q6ZNL6 1462 aa36.69■■■■□ 3.46
MBD3-205ENST00000589064 TDRD9Q8NDG6 1382 aaKnown RBP36.65■■■■□ 3.46
MBD3-205ENST00000589064 EIF4G3O43432 1585 aaKnown RBP36.64■■■■□ 3.46
MBD3-205ENST00000589064 FBLN2P98095 1184 aa36.48■■■■□ 3.43
MBD3-205ENST00000589064 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.42
MBD3-205ENST00000589064 TRIM41Q8WV44 630 aa36.39■■■■□ 3.42
MBD3-205ENST00000589064 WDR97A6NE52 1622 aa36.32■■■■□ 3.4
MBD3-205ENST00000589064 GRIN2BQ13224 1484 aa36.31■■■■□ 3.4
MBD3-205ENST00000589064 SNAPC4Q5SXM2 1469 aa36.31■■■■□ 3.4
MBD3-205ENST00000589064 ABCA10Q8WWZ4 1543 aa36.3■■■■□ 3.4
MBD3-205ENST00000589064 CHMP7Q8WUX9 453 aaPredicted RBP36.28■■■■□ 3.4
MBD3-205ENST00000589064 GAPVD1Q14C86 1478 aa36.27■■■■□ 3.4
MBD3-205ENST00000589064 SYNJ1O43426 1573 aa36.26■■■■□ 3.4
MBD3-205ENST00000589064 TOP2BQ02880 1626 aa36.26■■■■□ 3.39
MBD3-205ENST00000589064 MAGI1Q96QZ7 1491 aaPredicted RBP36.2■■■■□ 3.39
MBD3-205ENST00000589064 CHD1O14646 1710 aa36.2■■■■□ 3.39
MBD3-205ENST00000589064 BIVM-ERCC5R4GMW8 1640 aa36.2■■■■□ 3.39
MBD3-205ENST00000589064 SYNJ2O15056 1496 aa36.1■■■■□ 3.37
MBD3-205ENST00000589064 ABCA5Q8WWZ7 1642 aa36.1■■■■□ 3.37
MBD3-205ENST00000589064 RIMBP3CA6NJZ7 1639 aa36.06■■■■□ 3.36
MBD3-205ENST00000589064 RIMBP3BA6NNM3 1639 aa36.06■■■■□ 3.36
MBD3-205ENST00000589064 RIMBP3Q9UFD9 1639 aa36.06■■■■□ 3.36
MBD3-205ENST00000589064 ARHGEF11O15085 1522 aa36.06■■■■□ 3.36
MBD3-205ENST00000589064 PBRM1Q86U86 1689 aa36.02■■■■□ 3.36
MBD3-205ENST00000589064 CYB5RLQ6IPT4 315 aa35.94■■■■□ 3.34
MBD3-205ENST00000589064 CLASP1Q7Z460 1538 aa35.89■■■■□ 3.34
MBD3-205ENST00000589064 FHAD1B1AJZ9 1412 aa35.85■■■■□ 3.33
MBD3-205ENST00000589064 GRIN2AQ12879 1464 aa35.82■■■■□ 3.32
MBD3-205ENST00000589064 ERICH3Q5RHP9 1530 aa35.82■■■■□ 3.32
MBD3-205ENST00000589064 ADAMTS12P58397 1594 aa35.79■■■■□ 3.32
MBD3-205ENST00000589064 ARAP1Q96P48 1450 aa35.77■■■■□ 3.32
MBD3-205ENST00000589064 NUP160Q12769 1436 aa35.69■■■■□ 3.3
MBD3-205ENST00000589064 KIF27Q86VH2 1401 aa35.69■■■■□ 3.3
MBD3-205ENST00000589064 IGF1RP08069 1367 aa35.67■■■■□ 3.3
MBD3-205ENST00000589064 CEP170Q5SW79 1584 aa35.62■■■■□ 3.29
MBD3-205ENST00000589064 JPH4Q96JJ6 628 aa35.48■■■■□ 3.27
MBD3-205ENST00000589064 ERCC6L2Q5T890 1561 aa35.44■■■■□ 3.26
MBD3-205ENST00000589064 CARMIL1Q5VZK9 1371 aa35.43■■■■□ 3.26
MBD3-205ENST00000589064 PRG4Q92954 1404 aaPredicted RBP35.37■■■■□ 3.25
MBD3-205ENST00000589064 TRHP20396 242 aaPredicted RBP35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms