RNA–Protein interactions for RNA: ENST00000627018.1

UBE3A-214, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-214ENST00000627018 NISCHQ9Y2I1 1504 aa48.98■■■■■ 5.43
UBE3A-214ENST00000627018 ABCC9O60706 1549 aa45.36■■■■■ 4.85
UBE3A-214ENST00000627018 CCDC180Q9P1Z9 1646 aa44.36■■■■■ 4.69
UBE3A-214ENST00000627018 DNAJC5BQ9UF47 199 aa43.52■■■■■ 4.56
UBE3A-214ENST00000627018 RB1CC1Q8TDY2 1594 aa42.69■■■■■ 4.43
UBE3A-214ENST00000627018 NACADO15069 1562 aa42.16■■■■■ 4.34
UBE3A-214ENST00000627018 PABPN1Q86U42 306 aaKnown RBP eCLIP42.06■■■■■ 4.32
UBE3A-214ENST00000627018 UNC13AQ9UPW8 1703 aa41.8■■■■■ 4.28
UBE3A-214ENST00000627018 DCAF8L2P0C7V8 631 aa41.66■■■■■ 4.26
UBE3A-214ENST00000627018 BICRAQ9NZM4 1560 aa41.59■■■■■ 4.25
UBE3A-214ENST00000627018 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
UBE3A-214ENST00000627018 CECR2Q9BXF3 1484 aa40.96■■■■■ 4.15
UBE3A-214ENST00000627018 CC2D2AQ9P2K1 1620 aa40.93■■■■■ 4.14
UBE3A-214ENST00000627018 SHROOM4Q9ULL8 1493 aa40.83■■■■■ 4.13
UBE3A-214ENST00000627018 DNAJC5Q9H3Z4 198 aa40.61■■■■■ 4.09
UBE3A-214ENST00000627018 EIF4G1Q04637 1599 aaKnown RBP40.61■■■■■ 4.09
UBE3A-214ENST00000627018 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
UBE3A-214ENST00000627018 SCRIBQ14160 1630 aa40.38■■■■■ 4.06
UBE3A-214ENST00000627018 DCAF1Q9Y4B6 1507 aa40.38■■■■■ 4.06
UBE3A-214ENST00000627018 CUX2O14529 1486 aa39.48■■■■□ 3.91
UBE3A-214ENST00000627018 ERCC6Q03468 1493 aa39.18■■■■□ 3.86
UBE3A-214ENST00000627018 NCAPD3P42695 1498 aa38.97■■■■□ 3.83
UBE3A-214ENST00000627018 NESP48681 1621 aa38.72■■■■□ 3.79
UBE3A-214ENST00000627018 ATAD2BQ9ULI0 1458 aa38.72■■■■□ 3.79
UBE3A-214ENST00000627018 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
UBE3A-214ENST00000627018 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
UBE3A-214ENST00000627018 SMARCA2P51531 1590 aa38.51■■■■□ 3.76
UBE3A-214ENST00000627018 SMARCA4P51532 1647 aa38.42■■■■□ 3.74
UBE3A-214ENST00000627018 TRIM41Q8WV44 630 aa38.38■■■■□ 3.73
UBE3A-214ENST00000627018 BAZ1BQ9UIG0 1483 aaKnown RBP38.25■■■■□ 3.71
UBE3A-214ENST00000627018 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
UBE3A-214ENST00000627018 KIF21AQ7Z4S6 1674 aa38.17■■■■□ 3.7
UBE3A-214ENST00000627018 PEG3Q9GZU2 1588 aa38.07■■■■□ 3.69
UBE3A-214ENST00000627018 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
UBE3A-214ENST00000627018 PDS5BQ9NTI5 1447 aa38.01■■■■□ 3.68
UBE3A-214ENST00000627018 MRC2Q9UBG0 1479 aa37.78■■■■□ 3.64
UBE3A-214ENST00000627018 WDR62O43379 1518 aa37.76■■■■□ 3.63
UBE3A-214ENST00000627018 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.63
UBE3A-214ENST00000627018 CADPSQ9ULU8 1353 aa37.71■■■■□ 3.63
UBE3A-214ENST00000627018 OSCARQ8IYS5 282 aa37.46■■■■□ 3.59
UBE3A-214ENST00000627018 CEP164Q9UPV0 1460 aa37.41■■■■□ 3.58
UBE3A-214ENST00000627018 FANCD2Q9BXW9 1451 aa37.3■■■■□ 3.56
UBE3A-214ENST00000627018 WIZO95785 1651 aa37.24■■■■□ 3.55
UBE3A-214ENST00000627018 RIMBP3CA6NJZ7 1639 aa37.18■■■■□ 3.54
UBE3A-214ENST00000627018 RIMBP3BA6NNM3 1639 aa37.18■■■■□ 3.54
UBE3A-214ENST00000627018 RIMBP3Q9UFD9 1639 aa37.18■■■■□ 3.54
UBE3A-214ENST00000627018 URB2Q14146 1524 aaKnown RBP37.1■■■■□ 3.53
UBE3A-214ENST00000627018 CFTRP13569 1480 aa37.1■■■■□ 3.53
UBE3A-214ENST00000627018 ARHGEF11O15085 1522 aa36.95■■■■□ 3.5
UBE3A-214ENST00000627018 ZNF608Q9ULD9 1512 aaPredicted RBP36.81■■■■□ 3.48
UBE3A-214ENST00000627018 IFT140Q96RY7 1462 aa36.7■■■■□ 3.47
UBE3A-214ENST00000627018 CYB5RLQ6IPT4 315 aa36.68■■■■□ 3.46
UBE3A-214ENST00000627018 TOP2AP11388 1531 aaKnown RBP36.68■■■■□ 3.46
UBE3A-214ENST00000627018 PRDM2Q13029 1718 aa36.61■■■■□ 3.45
UBE3A-214ENST00000627018 RSF1Q96T23 1441 aaPredicted RBP36.59■■■■□ 3.45
UBE3A-214ENST00000627018 TRHP20396 242 aaPredicted RBP36.56■■■■□ 3.44
UBE3A-214ENST00000627018 ARAP1Q96P48 1450 aa36.55■■■■□ 3.44
UBE3A-214ENST00000627018 EIF4G3O43432 1585 aaKnown RBP36.54■■■■□ 3.44
UBE3A-214ENST00000627018 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
UBE3A-214ENST00000627018 CHD1O14646 1710 aa36.45■■■■□ 3.43
UBE3A-214ENST00000627018 AQRO60306 1485 aaKnown RBP eCLIP36.32■■■■□ 3.41
UBE3A-214ENST00000627018 CCDC88BA6NC98 1476 aa36.29■■■■□ 3.4
UBE3A-214ENST00000627018 TARBP1Q13395 1621 aaKnown RBP36.27■■■■□ 3.4
UBE3A-214ENST00000627018 ABCC8Q09428 1581 aa36.27■■■■□ 3.4
UBE3A-214ENST00000627018 DNMBPQ6XZF7 1577 aa36.26■■■■□ 3.39
UBE3A-214ENST00000627018 FBLN2P98095 1184 aa36.2■■■■□ 3.39
UBE3A-214ENST00000627018 AEBP2Q6ZN18 517 aaPredicted RBP36.19■■■■□ 3.38
UBE3A-214ENST00000627018 POLA1P09884 1462 aaPredicted RBP36.07■■■■□ 3.37
UBE3A-214ENST00000627018 CLASP1Q7Z460 1538 aa36.03■■■■□ 3.36
UBE3A-214ENST00000627018 RAD54L2Q9Y4B4 1467 aa35.97■■■■□ 3.35
UBE3A-214ENST00000627018 TDRD9Q8NDG6 1382 aaKnown RBP35.93■■■■□ 3.34
UBE3A-214ENST00000627018 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
UBE3A-214ENST00000627018 SYNJ1O43426 1573 aa35.85■■■■□ 3.33
UBE3A-214ENST00000627018 SOGA1O94964 1423 aa35.83■■■■□ 3.33
UBE3A-214ENST00000627018 CHMP7Q8WUX9 453 aaPredicted RBP35.77■■■■□ 3.32
UBE3A-214ENST00000627018 WDR97A6NE52 1622 aa35.76■■■■□ 3.32
UBE3A-214ENST00000627018 MAGI1Q96QZ7 1491 aaPredicted RBP35.75■■■■□ 3.31
UBE3A-214ENST00000627018 FGD5Q6ZNL6 1462 aa35.69■■■■□ 3.3
UBE3A-214ENST00000627018 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
UBE3A-214ENST00000627018 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
UBE3A-214ENST00000627018 GRIN2BQ13224 1484 aa35.65■■■■□ 3.3
UBE3A-214ENST00000627018 CUX1P39880 1505 aa35.52■■■■□ 3.28
UBE3A-214ENST00000627018 PBRM1Q86U86 1689 aa35.46■■■■□ 3.27
UBE3A-214ENST00000627018 ERCC6L2Q5T890 1561 aa35.43■■■■□ 3.26
UBE3A-214ENST00000627018 ABCA5Q8WWZ7 1642 aa35.29■■■■□ 3.24
UBE3A-214ENST00000627018 CEP170Q5SW79 1584 aa35.23■■■■□ 3.23
UBE3A-214ENST00000627018 ABCA10Q8WWZ4 1543 aa35.22■■■■□ 3.23
UBE3A-214ENST00000627018 GRIN2AQ12879 1464 aa35.22■■■■□ 3.23
UBE3A-214ENST00000627018 KIF13AQ9H1H9 1805 aa35.21■■■■□ 3.23
UBE3A-214ENST00000627018 NUP160Q12769 1436 aa35.15■■■■□ 3.22
UBE3A-214ENST00000627018 SHROOM2Q13796 1616 aa35.13■■■■□ 3.21
UBE3A-214ENST00000627018 ADAMTS12P58397 1594 aa35.09■■■■□ 3.21
UBE3A-214ENST00000627018 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
UBE3A-214ENST00000627018 ABCC10Q5T3U5 1492 aa34.88■■■■□ 3.17
UBE3A-214ENST00000627018 KDM4FA0A1W2PPD8 638 aa34.86■■■■□ 3.17
UBE3A-214ENST00000627018 PRG4Q92954 1404 aaPredicted RBP34.86■■■■□ 3.17
UBE3A-214ENST00000627018 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.175e-6■■■■■ 29.2
UBE3A-214ENST00000627018 FAM69CQ0P6D2 419 aa34.84■■■■□ 3.17
UBE3A-214ENST00000627018 ILDR1Q86SU0 546 aaPredicted RBP34.82■■■■□ 3.16
UBE3A-214ENST00000627018 DIP2BQ9P265 1576 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms