RNA–Protein interactions for RNA: ENST00000628267.2

UBE3A-215, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-215ENST00000628267 NISCHQ9Y2I1 1504 aa50.68■■■■■ 5.7
UBE3A-215ENST00000628267 ABCC9O60706 1549 aa45.81■■■■■ 4.92
UBE3A-215ENST00000628267 CCDC180Q9P1Z9 1646 aa45.6■■■■■ 4.89
UBE3A-215ENST00000628267 RB1CC1Q8TDY2 1594 aa43.54■■■■■ 4.56
UBE3A-215ENST00000628267 NACADO15069 1562 aa43.2■■■■■ 4.51
UBE3A-215ENST00000628267 DNAJC5BQ9UF47 199 aa43.19■■■■■ 4.5
UBE3A-215ENST00000628267 DCAF8L2P0C7V8 631 aa42.91■■■■■ 4.46
UBE3A-215ENST00000628267 PABPN1Q86U42 306 aaKnown RBP eCLIP42.62■■■■■ 4.41
UBE3A-215ENST00000628267 MYO15BQ96JP2 1530 aa42.54■■■■■ 4.4
UBE3A-215ENST00000628267 UNC13AQ9UPW8 1703 aa42.5■■■■■ 4.39
UBE3A-215ENST00000628267 BICRAQ9NZM4 1560 aa42.24■■■■■ 4.35
UBE3A-215ENST00000628267 ZCCHC6Q5VYS8 1495 aaKnown RBP41.93■■■■■ 4.3
UBE3A-215ENST00000628267 DCAF1Q9Y4B6 1507 aa41.89■■■■■ 4.3
UBE3A-215ENST00000628267 SHROOM4Q9ULL8 1493 aa41.72■■■■■ 4.27
UBE3A-215ENST00000628267 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
UBE3A-215ENST00000628267 CC2D2AQ9P2K1 1620 aa41.38■■■■■ 4.21
UBE3A-215ENST00000628267 CECR2Q9BXF3 1484 aa41.32■■■■■ 4.2
UBE3A-215ENST00000628267 EIF4G1Q04637 1599 aaKnown RBP41.24■■■■■ 4.19
UBE3A-215ENST00000628267 DNAJC5Q9H3Z4 198 aa39.92■■■■□ 3.98
UBE3A-215ENST00000628267 NCAPD3P42695 1498 aa39.88■■■■□ 3.98
UBE3A-215ENST00000628267 ATAD2BQ9ULI0 1458 aa39.69■■■■□ 3.94
UBE3A-215ENST00000628267 CUX2O14529 1486 aa39.63■■■■□ 3.94
UBE3A-215ENST00000628267 ERCC6Q03468 1493 aa39.6■■■■□ 3.93
UBE3A-215ENST00000628267 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
UBE3A-215ENST00000628267 SMARCA4P51532 1647 aa39.58■■■■□ 3.93
UBE3A-215ENST00000628267 HMGXB3Q12766 1538 aa39.55■■■■□ 3.92
UBE3A-215ENST00000628267 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.89
UBE3A-215ENST00000628267 BAZ1BQ9UIG0 1483 aaKnown RBP39.3■■■■□ 3.88
UBE3A-215ENST00000628267 NESP48681 1621 aa39.27■■■■□ 3.88
UBE3A-215ENST00000628267 PEG3Q9GZU2 1588 aa39.22■■■■□ 3.87
UBE3A-215ENST00000628267 MROH2BQ7Z745 1585 aa39.03■■■■□ 3.84
UBE3A-215ENST00000628267 LAMC3Q9Y6N6 1575 aa39.02■■■■□ 3.84
UBE3A-215ENST00000628267 THOC2Q8NI27 1593 aaKnown RBP38.92■■■■□ 3.82
UBE3A-215ENST00000628267 PDS5BQ9NTI5 1447 aa38.82■■■■□ 3.81
UBE3A-215ENST00000628267 KIF21AQ7Z4S6 1674 aa38.76■■■■□ 3.8
UBE3A-215ENST00000628267 CADPSQ9ULU8 1353 aa38.66■■■■□ 3.78
UBE3A-215ENST00000628267 WIZO95785 1651 aa38.54■■■■□ 3.76
UBE3A-215ENST00000628267 MRC2Q9UBG0 1479 aa38.46■■■■□ 3.75
UBE3A-215ENST00000628267 WDR62O43379 1518 aa38.37■■■■□ 3.73
UBE3A-215ENST00000628267 CEP164Q9UPV0 1460 aa38.26■■■■□ 3.72
UBE3A-215ENST00000628267 FANCD2Q9BXW9 1451 aa38.19■■■■□ 3.7
UBE3A-215ENST00000628267 CFTRP13569 1480 aa38.15■■■■□ 3.7
UBE3A-215ENST00000628267 RSF1Q96T23 1441 aaPredicted RBP38.14■■■■□ 3.7
UBE3A-215ENST00000628267 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
UBE3A-215ENST00000628267 TRIM41Q8WV44 630 aa38.02■■■■□ 3.68
UBE3A-215ENST00000628267 URB2Q14146 1524 aaKnown RBP37.87■■■■□ 3.65
UBE3A-215ENST00000628267 OSCARQ8IYS5 282 aa37.82■■■■□ 3.64
UBE3A-215ENST00000628267 PRDM2Q13029 1718 aa37.73■■■■□ 3.63
UBE3A-215ENST00000628267 CCDC88BA6NC98 1476 aa37.64■■■■□ 3.62
UBE3A-215ENST00000628267 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
UBE3A-215ENST00000628267 TOPBP1Q92547 1522 aa37.43■■■■□ 3.58
UBE3A-215ENST00000628267 ZNF608Q9ULD9 1512 aaPredicted RBP37.43■■■■□ 3.58
UBE3A-215ENST00000628267 ABCC8Q09428 1581 aa37.41■■■■□ 3.58
UBE3A-215ENST00000628267 DNMBPQ6XZF7 1577 aa37.28■■■■□ 3.56
UBE3A-215ENST00000628267 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
UBE3A-215ENST00000628267 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
UBE3A-215ENST00000628267 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
UBE3A-215ENST00000628267 EIF4G3O43432 1585 aaKnown RBP37.22■■■■□ 3.55
UBE3A-215ENST00000628267 ARHGEF11O15085 1522 aa37.15■■■■□ 3.54
UBE3A-215ENST00000628267 TARBP1Q13395 1621 aaKnown RBP37.12■■■■□ 3.53
UBE3A-215ENST00000628267 AQRO60306 1485 aaKnown RBP eCLIP37.08■■■■□ 3.532e-7■■■■□ 21.4
UBE3A-215ENST00000628267 POLA1P09884 1462 aaPredicted RBP37.03■■■■□ 3.52
UBE3A-215ENST00000628267 CHD1O14646 1710 aa36.99■■■■□ 3.51
UBE3A-215ENST00000628267 FBLN2P98095 1184 aa36.92■■■■□ 3.5
UBE3A-215ENST00000628267 CYB5RLQ6IPT4 315 aa36.92■■■■□ 3.5
UBE3A-215ENST00000628267 SOGA1O94964 1423 aa36.9■■■■□ 3.5
UBE3A-215ENST00000628267 RAD54L2Q9Y4B4 1467 aa36.88■■■■□ 3.5
UBE3A-215ENST00000628267 TDRD9Q8NDG6 1382 aaKnown RBP36.83■■■■□ 3.49
UBE3A-215ENST00000628267 WDR97A6NE52 1622 aa36.77■■■■□ 3.48
UBE3A-215ENST00000628267 FGD5Q6ZNL6 1462 aa36.76■■■■□ 3.48
UBE3A-215ENST00000628267 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
UBE3A-215ENST00000628267 SNAPC4Q5SXM2 1469 aa36.69■■■■□ 3.46
UBE3A-215ENST00000628267 CUX1P39880 1505 aa36.68■■■■□ 3.46
UBE3A-215ENST00000628267 CHMP7Q8WUX9 453 aaPredicted RBP36.64■■■■□ 3.46
UBE3A-215ENST00000628267 MAGI1Q96QZ7 1491 aaPredicted RBP36.62■■■■□ 3.45
UBE3A-215ENST00000628267 TRHP20396 242 aaPredicted RBP36.61■■■■□ 3.45
UBE3A-215ENST00000628267 GRIN2BQ13224 1484 aa36.6■■■■□ 3.45
UBE3A-215ENST00000628267 CLASP1Q7Z460 1538 aa36.57■■■■□ 3.44
UBE3A-215ENST00000628267 SYNJ1O43426 1573 aa36.57■■■■□ 3.44
UBE3A-215ENST00000628267 SYNJ2O15056 1496 aa36.5■■■■□ 3.43
UBE3A-215ENST00000628267 GAPVD1Q14C86 1478 aa36.43■■■■□ 3.42
UBE3A-215ENST00000628267 PBRM1Q86U86 1689 aa36.39■■■■□ 3.42
UBE3A-215ENST00000628267 ABCA10Q8WWZ4 1543 aa36.35■■■■□ 3.41
UBE3A-215ENST00000628267 ABCA5Q8WWZ7 1642 aa36.3■■■■□ 3.4
UBE3A-215ENST00000628267 SUPT5HO00267 1087 aaKnown RBP36.27■■■■□ 3.4
UBE3A-215ENST00000628267 WRNQ14191 1432 aaPredicted RBP eCLIP36.18■■■■□ 3.385e-6■■■■■ 29.2
UBE3A-215ENST00000628267 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
UBE3A-215ENST00000628267 TOP2BQ02880 1626 aa36.05■■■■□ 3.36
UBE3A-215ENST00000628267 BIVM-ERCC5R4GMW8 1640 aa36.05■■■■□ 3.36
UBE3A-215ENST00000628267 ADAMTS12P58397 1594 aa36.02■■■■□ 3.36
UBE3A-215ENST00000628267 NUP160Q12769 1436 aa36■■■■□ 3.35
UBE3A-215ENST00000628267 FHAD1B1AJZ9 1412 aa35.97■■■■□ 3.35
UBE3A-215ENST00000628267 CEP170Q5SW79 1584 aa35.97■■■■□ 3.35
UBE3A-215ENST00000628267 ERCC6L2Q5T890 1561 aa35.95■■■■□ 3.35
UBE3A-215ENST00000628267 ERICH3Q5RHP9 1530 aa35.9■■■■□ 3.34
UBE3A-215ENST00000628267 SHROOM2Q13796 1616 aa35.86■■■■□ 3.33
UBE3A-215ENST00000628267 AEBP2Q6ZN18 517 aaPredicted RBP35.74■■■■□ 3.31
UBE3A-215ENST00000628267 PRG4Q92954 1404 aaPredicted RBP35.68■■■■□ 3.3
UBE3A-215ENST00000628267 JPH4Q96JJ6 628 aa35.67■■■■□ 3.3
UBE3A-215ENST00000628267 RUSC2Q8N2Y8 1516 aa35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms