RNA–Protein interactions for RNA: ENST00000479452.5

EXD3-208, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene EXD3, Length 962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-208ENST00000479452 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
EXD3-208ENST00000479452 CCDC180Q9P1Z9 1646 aa45.89■■■■■ 4.94
EXD3-208ENST00000479452 ABCC9O60706 1549 aa45.48■■■■■ 4.87
EXD3-208ENST00000479452 DCAF8L2P0C7V8 631 aa43.65■■■■■ 4.58
EXD3-208ENST00000479452 RB1CC1Q8TDY2 1594 aa43.52■■■■■ 4.56
EXD3-208ENST00000479452 NACADO15069 1562 aa43.37■■■■■ 4.53
EXD3-208ENST00000479452 MYO15BQ96JP2 1530 aa42.95■■■■■ 4.47
EXD3-208ENST00000479452 ZCCHC6Q5VYS8 1495 aaKnown RBP42.85■■■■■ 4.45
EXD3-208ENST00000479452 DCAF1Q9Y4B6 1507 aa42.62■■■■■ 4.41
EXD3-208ENST00000479452 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
EXD3-208ENST00000479452 UNC13AQ9UPW8 1703 aa42.25■■■■■ 4.35
EXD3-208ENST00000479452 DNAJC5BQ9UF47 199 aa42.12■■■■■ 4.33
EXD3-208ENST00000479452 BICRAQ9NZM4 1560 aa42.08■■■■■ 4.33
EXD3-208ENST00000479452 SCRIBQ14160 1630 aa41.96■■■■■ 4.31
EXD3-208ENST00000479452 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
EXD3-208ENST00000479452 EIF4G1Q04637 1599 aaKnown RBP41.09■■■■■ 4.17
EXD3-208ENST00000479452 CC2D2AQ9P2K1 1620 aa41.01■■■■■ 4.16
EXD3-208ENST00000479452 CECR2Q9BXF3 1484 aa40.91■■■■■ 4.14
EXD3-208ENST00000479452 NCAPD3P42695 1498 aa40.07■■■■■ 4
EXD3-208ENST00000479452 SMARCA4P51532 1647 aa40.05■■■■■ 4
EXD3-208ENST00000479452 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
EXD3-208ENST00000479452 ATAD2BQ9ULI0 1458 aa40.02■■■■■ 4
EXD3-208ENST00000479452 SMARCA2P51531 1590 aa39.94■■■■□ 3.98
EXD3-208ENST00000479452 MROH2BQ7Z745 1585 aa39.75■■■■□ 3.95
EXD3-208ENST00000479452 HMGXB3Q12766 1538 aa39.74■■■■□ 3.95
EXD3-208ENST00000479452 BAZ1BQ9UIG0 1483 aaKnown RBP39.71■■■■□ 3.95
EXD3-208ENST00000479452 PEG3Q9GZU2 1588 aa39.63■■■■□ 3.93
EXD3-208ENST00000479452 ERCC6Q03468 1493 aa39.3■■■■□ 3.88
EXD3-208ENST00000479452 WIZO95785 1651 aa39.25■■■■□ 3.87
EXD3-208ENST00000479452 RSF1Q96T23 1441 aaPredicted RBP39.23■■■■□ 3.87
EXD3-208ENST00000479452 NESP48681 1621 aa39.18■■■■□ 3.86
EXD3-208ENST00000479452 DNAJC5Q9H3Z4 198 aa39.06■■■■□ 3.84
EXD3-208ENST00000479452 LAMC3Q9Y6N6 1575 aa39.01■■■■□ 3.84
EXD3-208ENST00000479452 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
EXD3-208ENST00000479452 PDS5BQ9NTI5 1447 aa38.92■■■■□ 3.82
EXD3-208ENST00000479452 CUX2O14529 1486 aa38.92■■■■□ 3.82
EXD3-208ENST00000479452 TOP2AP11388 1531 aaKnown RBP38.85■■■■□ 3.81
EXD3-208ENST00000479452 KIF21AQ7Z4S6 1674 aa38.57■■■■□ 3.76
EXD3-208ENST00000479452 CFTRP13569 1480 aa38.55■■■■□ 3.76
EXD3-208ENST00000479452 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
EXD3-208ENST00000479452 CCDC88BA6NC98 1476 aa38.47■■■■□ 3.75
EXD3-208ENST00000479452 FANCD2Q9BXW9 1451 aa38.46■■■■□ 3.75
EXD3-208ENST00000479452 MRC2Q9UBG0 1479 aa38.45■■■■□ 3.75
EXD3-208ENST00000479452 CEP164Q9UPV0 1460 aa38.45■■■■□ 3.75
EXD3-208ENST00000479452 WDR62O43379 1518 aa38.24■■■■□ 3.71
EXD3-208ENST00000479452 SUPT5HO00267 1087 aaKnown RBP38.2■■■■□ 3.71
EXD3-208ENST00000479452 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
EXD3-208ENST00000479452 PRDM2Q13029 1718 aa37.98■■■■□ 3.67
EXD3-208ENST00000479452 ABCC8Q09428 1581 aa37.81■■■■□ 3.64
EXD3-208ENST00000479452 TOPBP1Q92547 1522 aa37.75■■■■□ 3.63
EXD3-208ENST00000479452 IFT140Q96RY7 1462 aa37.67■■■■□ 3.62
EXD3-208ENST00000479452 DNMBPQ6XZF7 1577 aa37.64■■■■□ 3.62
EXD3-208ENST00000479452 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
EXD3-208ENST00000479452 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
EXD3-208ENST00000479452 POLA1P09884 1462 aaPredicted RBP37.41■■■■□ 3.58
EXD3-208ENST00000479452 SOGA1O94964 1423 aa37.38■■■■□ 3.57
EXD3-208ENST00000479452 AQRO60306 1485 aaKnown RBP eCLIP37.3■■■■□ 3.566e-7■■□□□ 11.9
EXD3-208ENST00000479452 RAD54L2Q9Y4B4 1467 aa37.3■■■■□ 3.56
EXD3-208ENST00000479452 CUX1P39880 1505 aa37.3■■■■□ 3.56
EXD3-208ENST00000479452 FGD5Q6ZNL6 1462 aa37.28■■■■□ 3.56
EXD3-208ENST00000479452 TARBP1Q13395 1621 aaKnown RBP37.27■■■■□ 3.56
EXD3-208ENST00000479452 EIF4G3O43432 1585 aaKnown RBP37.22■■■■□ 3.55
EXD3-208ENST00000479452 TDRD9Q8NDG6 1382 aaKnown RBP37.21■■■■□ 3.55
EXD3-208ENST00000479452 TRIM41Q8WV44 630 aa37.19■■■■□ 3.54
EXD3-208ENST00000479452 FBLN2P98095 1184 aa37.13■■■■□ 3.53
EXD3-208ENST00000479452 WRNQ14191 1432 aaPredicted RBP eCLIP37.04■■■■□ 3.526e-6■■■■■ 36.2
EXD3-208ENST00000479452 WDR97A6NE52 1622 aa36.99■■■■□ 3.51
EXD3-208ENST00000479452 CHMP7Q8WUX9 453 aaPredicted RBP36.94■■■■□ 3.5
EXD3-208ENST00000479452 GRIN2BQ13224 1484 aa36.93■■■■□ 3.5
EXD3-208ENST00000479452 SNAPC4Q5SXM2 1469 aa36.89■■■■□ 3.5
EXD3-208ENST00000479452 ABCA10Q8WWZ4 1543 aa36.89■■■■□ 3.5
EXD3-208ENST00000479452 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.49
EXD3-208ENST00000479452 TOP2BQ02880 1626 aa36.86■■■■□ 3.49
EXD3-208ENST00000479452 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.49
EXD3-208ENST00000479452 SYNJ1O43426 1573 aa36.82■■■■□ 3.48
EXD3-208ENST00000479452 BIVM-ERCC5R4GMW8 1640 aa36.8■■■■□ 3.48
EXD3-208ENST00000479452 CHD1O14646 1710 aa36.76■■■■□ 3.48
EXD3-208ENST00000479452 SYNJ2O15056 1496 aa36.7■■■■□ 3.47
EXD3-208ENST00000479452 ABCA5Q8WWZ7 1642 aa36.66■■■■□ 3.46
EXD3-208ENST00000479452 PBRM1Q86U86 1689 aa36.61■■■■□ 3.45
EXD3-208ENST00000479452 ARHGEF11O15085 1522 aa36.61■■■■□ 3.45
EXD3-208ENST00000479452 RIMBP3CA6NJZ7 1639 aa36.6■■■■□ 3.45
EXD3-208ENST00000479452 RIMBP3BA6NNM3 1639 aa36.6■■■■□ 3.45
EXD3-208ENST00000479452 RIMBP3Q9UFD9 1639 aa36.6■■■■□ 3.45
EXD3-208ENST00000479452 CYB5RLQ6IPT4 315 aa36.52■■■■□ 3.44
EXD3-208ENST00000479452 FHAD1B1AJZ9 1412 aa36.46■■■■□ 3.43
EXD3-208ENST00000479452 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
EXD3-208ENST00000479452 CLASP1Q7Z460 1538 aa36.42■■■■□ 3.42
EXD3-208ENST00000479452 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
EXD3-208ENST00000479452 ADAMTS12P58397 1594 aa36.37■■■■□ 3.41
EXD3-208ENST00000479452 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
EXD3-208ENST00000479452 ARAP1Q96P48 1450 aa36.28■■■■□ 3.4
EXD3-208ENST00000479452 NUP160Q12769 1436 aa36.24■■■■□ 3.39
EXD3-208ENST00000479452 IGF1RP08069 1367 aa36.22■■■■□ 3.39
EXD3-208ENST00000479452 CEP170Q5SW79 1584 aa36.16■■■■□ 3.38
EXD3-208ENST00000479452 JPH4Q96JJ6 628 aa36.05■■■■□ 3.36
EXD3-208ENST00000479452 CARMIL1Q5VZK9 1371 aa36.03■■■■□ 3.36
EXD3-208ENST00000479452 TRHP20396 242 aaPredicted RBP36■■■■□ 3.35
EXD3-208ENST00000479452 CUL7Q14999 1698 aa35.98■■■■□ 3.35
EXD3-208ENST00000479452 PRG4Q92954 1404 aaPredicted RBP35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms