RNA–Protein interactions for RNA: ENST00000628733.2

UBE3A-216, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-216ENST00000628733 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
UBE3A-216ENST00000628733 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
UBE3A-216ENST00000628733 SENP3Q9H4L4 574 aaPredicted RBP17.18■□□□□ 0.34
UBE3A-216ENST00000628733 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
UBE3A-216ENST00000628733 FOXD1Q16676 465 aa16.03■□□□□ 0.16
UBE3A-216ENST00000628733 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
UBE3A-216ENST00000628733 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
UBE3A-216ENST00000628733 MSH5O43196 834 aa15.21■□□□□ 0.03
UBE3A-216ENST00000628733 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
UBE3A-216ENST00000628733 ADRA2BP18089 450 aa14.99□□□□□ -0.01
UBE3A-216ENST00000628733 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-216ENST00000628733 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-216ENST00000628733 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
UBE3A-216ENST00000628733 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
UBE3A-216ENST00000628733 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
UBE3A-216ENST00000628733 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-216ENST00000628733 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-216ENST00000628733 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
UBE3A-216ENST00000628733 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
UBE3A-216ENST00000628733 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
UBE3A-216ENST00000628733 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
UBE3A-216ENST00000628733 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
UBE3A-216ENST00000628733 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
UBE3A-216ENST00000628733 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
UBE3A-216ENST00000628733 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
UBE3A-216ENST00000628733 KCNA4P22459 653 aa12.65□□□□□ -0.38
UBE3A-216ENST00000628733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBE3A-216ENST00000628733 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
UBE3A-216ENST00000628733 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
UBE3A-216ENST00000628733 POTEHQ6S545 545 aa12.12□□□□□ -0.47
UBE3A-216ENST00000628733 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
UBE3A-216ENST00000628733 CAPN15O75808 1086 aa11.99□□□□□ -0.49
UBE3A-216ENST00000628733 DSG3P32926 999 aa11.98□□□□□ -0.49
UBE3A-216ENST00000628733 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
UBE3A-216ENST00000628733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
UBE3A-216ENST00000628733 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
UBE3A-216ENST00000628733 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
UBE3A-216ENST00000628733 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
UBE3A-216ENST00000628733 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
UBE3A-216ENST00000628733 APLP2Q06481 763 aa11.76□□□□□ -0.53
UBE3A-216ENST00000628733 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
UBE3A-216ENST00000628733 ABCB7O75027 752 aa11.72□□□□□ -0.53
UBE3A-216ENST00000628733 ZBTB22O15209 634 aa11.71□□□□□ -0.53
UBE3A-216ENST00000628733 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
UBE3A-216ENST00000628733 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
UBE3A-216ENST00000628733 POLA2Q14181 598 aa11.53□□□□□ -0.56
UBE3A-216ENST00000628733 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
UBE3A-216ENST00000628733 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
UBE3A-216ENST00000628733 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
UBE3A-216ENST00000628733 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
UBE3A-216ENST00000628733 OSCARQ8IYS5 282 aa11.18□□□□□ -0.62
UBE3A-216ENST00000628733 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
UBE3A-216ENST00000628733 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
UBE3A-216ENST00000628733 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
UBE3A-216ENST00000628733 AKT1S1Q96B36 256 aa11.11□□□□□ -0.63
UBE3A-216ENST00000628733 REM2Q8IYK8 340 aaPredicted RBP11.05□□□□□ -0.64
UBE3A-216ENST00000628733 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
UBE3A-216ENST00000628733 HAX1O00165 279 aa10.97□□□□□ -0.65
UBE3A-216ENST00000628733 FBLN2P98095 1184 aa10.97□□□□□ -0.65
UBE3A-216ENST00000628733 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
UBE3A-216ENST00000628733 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
UBE3A-216ENST00000628733 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
UBE3A-216ENST00000628733 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
UBE3A-216ENST00000628733 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
UBE3A-216ENST00000628733 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
UBE3A-216ENST00000628733 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
UBE3A-216ENST00000628733 ZNF692Q9BU19 519 aaPredicted RBP10.79□□□□□ -0.68
UBE3A-216ENST00000628733 EVX2Q03828 476 aa10.71□□□□□ -0.69
UBE3A-216ENST00000628733 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
UBE3A-216ENST00000628733 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBE3A-216ENST00000628733 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
UBE3A-216ENST00000628733 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
UBE3A-216ENST00000628733 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
UBE3A-216ENST00000628733 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
UBE3A-216ENST00000628733 SPDYE4A6NLX3 237 aa10.49□□□□□ -0.73
UBE3A-216ENST00000628733 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
UBE3A-216ENST00000628733 LHX8Q68G74 356 aa10.49□□□□□ -0.73
UBE3A-216ENST00000628733 GABBR2O75899 941 aa10.48□□□□□ -0.73
UBE3A-216ENST00000628733 PROM2Q8N271 834 aa10.4□□□□□ -0.74
UBE3A-216ENST00000628733 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
UBE3A-216ENST00000628733 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
UBE3A-216ENST00000628733 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
UBE3A-216ENST00000628733 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
UBE3A-216ENST00000628733 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
UBE3A-216ENST00000628733 PLSCR2Q9NRY7 297 aa10.23□□□□□ -0.77
UBE3A-216ENST00000628733 POTEIP0CG38 1075 aa10.21□□□□□ -0.77
UBE3A-216ENST00000628733 CLCN6P51797 869 aa10.19□□□□□ -0.78
UBE3A-216ENST00000628733 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
UBE3A-216ENST00000628733 ZNF579Q8NAF0 562 aaKnown RBP10.16□□□□□ -0.78
UBE3A-216ENST00000628733 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
UBE3A-216ENST00000628733 GALR2O43603 387 aaPredicted RBP10.05□□□□□ -0.8
UBE3A-216ENST00000628733 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
UBE3A-216ENST00000628733 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
UBE3A-216ENST00000628733 FKBP8Q14318 412 aa10.03□□□□□ -0.8
UBE3A-216ENST00000628733 CCDC61Q9Y6R9 512 aa9.96□□□□□ -0.82
UBE3A-216ENST00000628733 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
UBE3A-216ENST00000628733 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
UBE3A-216ENST00000628733 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
UBE3A-216ENST00000628733 MIER1Q8N108 512 aa9.93□□□□□ -0.82
UBE3A-216ENST00000628733 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms