RNA–Protein interactions for RNA: ENST00000629886.2

UBE3A-219, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-219ENST00000629886 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
UBE3A-219ENST00000629886 ABCC9O60706 1549 aa12.55□□□□□ -0.4
UBE3A-219ENST00000629886 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
UBE3A-219ENST00000629886 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
UBE3A-219ENST00000629886 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBE3A-219ENST00000629886 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
UBE3A-219ENST00000629886 CCDC180Q9P1Z9 1646 aa11.42□□□□□ -0.58
UBE3A-219ENST00000629886 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
UBE3A-219ENST00000629886 CECR2Q9BXF3 1484 aa11.38□□□□□ -0.59
UBE3A-219ENST00000629886 CC2D2AQ9P2K1 1620 aa11.22□□□□□ -0.61
UBE3A-219ENST00000629886 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
UBE3A-219ENST00000629886 CUX2O14529 1486 aa11.13□□□□□ -0.63
UBE3A-219ENST00000629886 UNC13AQ9UPW8 1703 aa11.1□□□□□ -0.63
UBE3A-219ENST00000629886 NACADO15069 1562 aa11.07□□□□□ -0.64
UBE3A-219ENST00000629886 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
UBE3A-219ENST00000629886 AEBP2Q6ZN18 517 aaPredicted RBP11□□□□□ -0.65
UBE3A-219ENST00000629886 EIF4G1Q04637 1599 aaKnown RBP10.95□□□□□ -0.66
UBE3A-219ENST00000629886 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
UBE3A-219ENST00000629886 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
UBE3A-219ENST00000629886 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
UBE3A-219ENST00000629886 TRHP20396 242 aaPredicted RBP10.61□□□□□ -0.71
UBE3A-219ENST00000629886 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
UBE3A-219ENST00000629886 OSCARQ8IYS5 282 aa10.54□□□□□ -0.72
UBE3A-219ENST00000629886 SCRIBQ14160 1630 aa10.52□□□□□ -0.73
UBE3A-219ENST00000629886 NESP48681 1621 aa10.51□□□□□ -0.73
UBE3A-219ENST00000629886 THOC2Q8NI27 1593 aaKnown RBP10.51□□□□□ -0.73
UBE3A-219ENST00000629886 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
UBE3A-219ENST00000629886 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
UBE3A-219ENST00000629886 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
UBE3A-219ENST00000629886 BAZ1AQ9NRL2 1556 aaPredicted RBP10.42□□□□□ -0.74
UBE3A-219ENST00000629886 CYB5RLQ6IPT4 315 aa10.41□□□□□ -0.74
UBE3A-219ENST00000629886 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
UBE3A-219ENST00000629886 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
UBE3A-219ENST00000629886 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
UBE3A-219ENST00000629886 KIF21AQ7Z4S6 1674 aa10.23□□□□□ -0.77
UBE3A-219ENST00000629886 ARAP1Q96P48 1450 aa10.19□□□□□ -0.78
UBE3A-219ENST00000629886 PDS5BQ9NTI5 1447 aa10.19□□□□□ -0.78
UBE3A-219ENST00000629886 LAMC3Q9Y6N6 1575 aa10.16□□□□□ -0.78
UBE3A-219ENST00000629886 MRC2Q9UBG0 1479 aa10.16□□□□□ -0.78
UBE3A-219ENST00000629886 WDR62O43379 1518 aa10.14□□□□□ -0.79
UBE3A-219ENST00000629886 ATAD2BQ9ULI0 1458 aa10.14□□□□□ -0.79
UBE3A-219ENST00000629886 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
UBE3A-219ENST00000629886 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
UBE3A-219ENST00000629886 KDM4FA0A1W2PPD8 638 aa10.09□□□□□ -0.79
UBE3A-219ENST00000629886 SOCS7O14512 581 aa10.09□□□□□ -0.79
UBE3A-219ENST00000629886 HMGXB3Q12766 1538 aa10.07□□□□□ -0.8
UBE3A-219ENST00000629886 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
UBE3A-219ENST00000629886 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
UBE3A-219ENST00000629886 ZCCHC6Q5VYS8 1495 aaKnown RBP10.03□□□□□ -0.8
UBE3A-219ENST00000629886 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
UBE3A-219ENST00000629886 CADPSQ9ULU8 1353 aa9.96□□□□□ -0.82
UBE3A-219ENST00000629886 RSF1Q96T23 1441 aaPredicted RBP9.93□□□□□ -0.82
UBE3A-219ENST00000629886 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
UBE3A-219ENST00000629886 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
UBE3A-219ENST00000629886 ZNF608Q9ULD9 1512 aaPredicted RBP9.9□□□□□ -0.82
UBE3A-219ENST00000629886 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
UBE3A-219ENST00000629886 FBLN2P98095 1184 aa9.87□□□□□ -0.83
UBE3A-219ENST00000629886 HECW2Q9P2P5 1572 aa9.87□□□□□ -0.83
UBE3A-219ENST00000629886 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
UBE3A-219ENST00000629886 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
UBE3A-219ENST00000629886 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
UBE3A-219ENST00000629886 CHD1O14646 1710 aa9.8□□□□□ -0.84
UBE3A-219ENST00000629886 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
UBE3A-219ENST00000629886 IFT140Q96RY7 1462 aa9.75□□□□□ -0.85
UBE3A-219ENST00000629886 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
UBE3A-219ENST00000629886 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.85
UBE3A-219ENST00000629886 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.85
UBE3A-219ENST00000629886 ADGRL1O94910 1474 aa9.71□□□□□ -0.86
UBE3A-219ENST00000629886 AQRO60306 1485 aaKnown RBP eCLIP9.7□□□□□ -0.862e-6■■□□□ 13.2
UBE3A-219ENST00000629886 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
UBE3A-219ENST00000629886 KIF13AQ9H1H9 1805 aa9.67□□□□□ -0.86
UBE3A-219ENST00000629886 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
UBE3A-219ENST00000629886 KDM6BO15054 1643 aa9.64□□□□□ -0.87
UBE3A-219ENST00000629886 CFTRP13569 1480 aa9.62□□□□□ -0.87
UBE3A-219ENST00000629886 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
UBE3A-219ENST00000629886 SYNJ1O43426 1573 aa9.58□□□□□ -0.88
UBE3A-219ENST00000629886 SPATA31D1Q6ZQQ2 1576 aa9.58□□□□□ -0.88
UBE3A-219ENST00000629886 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
UBE3A-219ENST00000629886 ABCC10Q5T3U5 1492 aa9.54□□□□□ -0.88
UBE3A-219ENST00000629886 TOPBP1Q92547 1522 aa9.54□□□□□ -0.88
UBE3A-219ENST00000629886 SNAPC4Q5SXM2 1469 aa9.53□□□□□ -0.88
UBE3A-219ENST00000629886 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
UBE3A-219ENST00000629886 CERKQ8TCT0 537 aa9.5□□□□□ -0.89
UBE3A-219ENST00000629886 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
UBE3A-219ENST00000629886 DIP2BQ9P265 1576 aa9.46□□□□□ -0.9
UBE3A-219ENST00000629886 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
UBE3A-219ENST00000629886 RAD54L2Q9Y4B4 1467 aa9.42□□□□□ -0.9
UBE3A-219ENST00000629886 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
UBE3A-219ENST00000629886 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.9
UBE3A-219ENST00000629886 POLA1P09884 1462 aaPredicted RBP9.39□□□□□ -0.91
UBE3A-219ENST00000629886 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
UBE3A-219ENST00000629886 MAPKBP1O60336 1514 aa9.38□□□□□ -0.91
UBE3A-219ENST00000629886 WIZO95785 1651 aa9.38□□□□□ -0.91
UBE3A-219ENST00000629886 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
UBE3A-219ENST00000629886 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
UBE3A-219ENST00000629886 COL17A1Q9UMD9 1497 aaPredicted RBP9.37□□□□□ -0.91
UBE3A-219ENST00000629886 TOP2BQ02880 1626 aa9.36□□□□□ -0.91
UBE3A-219ENST00000629886 SOGA1O94964 1423 aa9.35□□□□□ -0.91
UBE3A-219ENST00000629886 GRIN2BQ13224 1484 aa9.34□□□□□ -0.91
UBE3A-219ENST00000629886 HSPA2P54652 639 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms