RNA–Protein interactions for RNA: ENST00000412770.6

PPP6R1-201, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-201ENST00000412770 NISCHQ9Y2I1 1504 aa34.63■■■■□ 3.13
PPP6R1-201ENST00000412770 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
PPP6R1-201ENST00000412770 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
PPP6R1-201ENST00000412770 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
PPP6R1-201ENST00000412770 ABCC9O60706 1549 aa29.21■■■□□ 2.27
PPP6R1-201ENST00000412770 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
PPP6R1-201ENST00000412770 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
PPP6R1-201ENST00000412770 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
PPP6R1-201ENST00000412770 SCRIBQ14160 1630 aa28.08■■■□□ 2.09
PPP6R1-201ENST00000412770 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.083e-7■■□□□ 13.5
PPP6R1-201ENST00000412770 NACADO15069 1562 aa27.98■■■□□ 2.07
PPP6R1-201ENST00000412770 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
PPP6R1-201ENST00000412770 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
PPP6R1-201ENST00000412770 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
PPP6R1-201ENST00000412770 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
PPP6R1-201ENST00000412770 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
PPP6R1-201ENST00000412770 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
PPP6R1-201ENST00000412770 EHMT2Q96KQ7 1210 aa27.04■■□□□ 1.92
PPP6R1-201ENST00000412770 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
PPP6R1-201ENST00000412770 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
PPP6R1-201ENST00000412770 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
PPP6R1-201ENST00000412770 WIZO95785 1651 aa26.54■■□□□ 1.84
PPP6R1-201ENST00000412770 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
PPP6R1-201ENST00000412770 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
PPP6R1-201ENST00000412770 SMARCA4P51532 1647 aa26.48■■□□□ 1.83
PPP6R1-201ENST00000412770 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
PPP6R1-201ENST00000412770 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
PPP6R1-201ENST00000412770 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
PPP6R1-201ENST00000412770 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
PPP6R1-201ENST00000412770 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
PPP6R1-201ENST00000412770 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
PPP6R1-201ENST00000412770 UBTFP17480 764 aaKnown RBP26.23■■□□□ 1.79
PPP6R1-201ENST00000412770 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
PPP6R1-201ENST00000412770 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
PPP6R1-201ENST00000412770 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PPP6R1-201ENST00000412770 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.73
PPP6R1-201ENST00000412770 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
PPP6R1-201ENST00000412770 CSRNP3Q8WYN3 585 aa25.85■■□□□ 1.73
PPP6R1-201ENST00000412770 APLP2Q06481 763 aa25.83■■□□□ 1.73
PPP6R1-201ENST00000412770 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
PPP6R1-201ENST00000412770 CC2D2AQ9P2K1 1620 aa25.76■■□□□ 1.71
PPP6R1-201ENST00000412770 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
PPP6R1-201ENST00000412770 PPARGC1BQ86YN6 1023 aaKnown RBP25.71■■□□□ 1.71
PPP6R1-201ENST00000412770 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
PPP6R1-201ENST00000412770 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
PPP6R1-201ENST00000412770 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
PPP6R1-201ENST00000412770 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
PPP6R1-201ENST00000412770 SOGA1O94964 1423 aa25.54■■□□□ 1.68
PPP6R1-201ENST00000412770 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
PPP6R1-201ENST00000412770 EEA1Q15075 1411 aa25.46■■□□□ 1.67
PPP6R1-201ENST00000412770 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
PPP6R1-201ENST00000412770 CFTRP13569 1480 aa25.39■■□□□ 1.66
PPP6R1-201ENST00000412770 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
PPP6R1-201ENST00000412770 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
PPP6R1-201ENST00000412770 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
PPP6R1-201ENST00000412770 NESP48681 1621 aa25.33■■□□□ 1.65
PPP6R1-201ENST00000412770 FBLN2P98095 1184 aa25.32■■□□□ 1.64
PPP6R1-201ENST00000412770 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
PPP6R1-201ENST00000412770 CUX2O14529 1486 aa25.28■■□□□ 1.64
PPP6R1-201ENST00000412770 CEP164Q9UPV0 1460 aa25.27■■□□□ 1.64
PPP6R1-201ENST00000412770 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
PPP6R1-201ENST00000412770 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
PPP6R1-201ENST00000412770 P3H3Q8IVL6 736 aa25.22■■□□□ 1.63
PPP6R1-201ENST00000412770 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
PPP6R1-201ENST00000412770 TNIKQ9UKE5 1360 aa25.12■■□□□ 1.61
PPP6R1-201ENST00000412770 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
PPP6R1-201ENST00000412770 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
PPP6R1-201ENST00000412770 CLIP1P30622 1438 aa25.08■■□□□ 1.61
PPP6R1-201ENST00000412770 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
PPP6R1-201ENST00000412770 CARMIL1Q5VZK9 1371 aa25.05■■□□□ 1.6
PPP6R1-201ENST00000412770 CUX1P39880 1505 aa25.04■■□□□ 1.6
PPP6R1-201ENST00000412770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.03■■□□□ 1.6
PPP6R1-201ENST00000412770 HNRNPUL2Q1KMD3 747 aaKnown RBP25.03■■□□□ 1.6
PPP6R1-201ENST00000412770 RAD54L2Q9Y4B4 1467 aa24.99■■□□□ 1.59
PPP6R1-201ENST00000412770 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
PPP6R1-201ENST00000412770 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
PPP6R1-201ENST00000412770 LAMC3Q9Y6N6 1575 aa24.95■■□□□ 1.58
PPP6R1-201ENST00000412770 RAPGEF2Q9Y4G8 1499 aa24.93■■□□□ 1.58
PPP6R1-201ENST00000412770 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
PPP6R1-201ENST00000412770 ITGAEP38570 1179 aa24.9■■□□□ 1.58
PPP6R1-201ENST00000412770 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
PPP6R1-201ENST00000412770 ARID3CA6NKF2 412 aa24.85■■□□□ 1.57
PPP6R1-201ENST00000412770 IGF1RP08069 1367 aa24.84■■□□□ 1.57
PPP6R1-201ENST00000412770 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
PPP6R1-201ENST00000412770 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
PPP6R1-201ENST00000412770 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
PPP6R1-201ENST00000412770 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
PPP6R1-201ENST00000412770 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
PPP6R1-201ENST00000412770 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
PPP6R1-201ENST00000412770 AQRO60306 1485 aaKnown RBP eCLIP24.68■■□□□ 1.542e-7■■■■□ 23.6
PPP6R1-201ENST00000412770 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
PPP6R1-201ENST00000412770 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
PPP6R1-201ENST00000412770 KIF21BO75037 1637 aa24.59■■□□□ 1.53
PPP6R1-201ENST00000412770 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
PPP6R1-201ENST00000412770 VPS8Q8N3P4 1428 aa24.59■■□□□ 1.53
PPP6R1-201ENST00000412770 HRCP23327 699 aa24.59■■□□□ 1.53
PPP6R1-201ENST00000412770 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
PPP6R1-201ENST00000412770 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
PPP6R1-201ENST00000412770 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
PPP6R1-201ENST00000412770 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms