RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
UBE3A-228ENST00000638155 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
UBE3A-228ENST00000638155 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
UBE3A-228ENST00000638155 CCER1Q8TC90 406 aaPredicted RBP20.87■□□□□ 0.93
UBE3A-228ENST00000638155 MYT1Q01538 1121 aa20.78■□□□□ 0.92
UBE3A-228ENST00000638155 CENPBP07199 599 aaPredicted RBP20.33■□□□□ 0.84
UBE3A-228ENST00000638155 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
UBE3A-228ENST00000638155 APLP2Q06481 763 aa20.23■□□□□ 0.83
UBE3A-228ENST00000638155 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
UBE3A-228ENST00000638155 YTHDC1Q96MU7 727 aaKnown RBP20.16■□□□□ 0.82
UBE3A-228ENST00000638155 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
UBE3A-228ENST00000638155 NEFLP07196 543 aa20.07■□□□□ 0.8
UBE3A-228ENST00000638155 DAXXQ9UER7 740 aaPredicted RBP19.94■□□□□ 0.78
UBE3A-228ENST00000638155 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
UBE3A-228ENST00000638155 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
UBE3A-228ENST00000638155 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
UBE3A-228ENST00000638155 RTL5Q5HYW3 569 aaPredicted RBP19.43■□□□□ 0.7
UBE3A-228ENST00000638155 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
UBE3A-228ENST00000638155 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
UBE3A-228ENST00000638155 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
UBE3A-228ENST00000638155 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
UBE3A-228ENST00000638155 CLSPNQ9HAW4 1339 aa19.07■□□□□ 0.64
UBE3A-228ENST00000638155 MYT1LQ9UL68 1186 aa18.91■□□□□ 0.62
UBE3A-228ENST00000638155 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
UBE3A-228ENST00000638155 GLIPR1L2Q4G1C9 344 aa18.81■□□□□ 0.6
UBE3A-228ENST00000638155 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
UBE3A-228ENST00000638155 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
UBE3A-228ENST00000638155 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
UBE3A-228ENST00000638155 ZBTB47Q9UFB7 747 aaPredicted RBP18.66■□□□□ 0.58
UBE3A-228ENST00000638155 EIF5BO60841 1220 aaKnown RBP18.64■□□□□ 0.58
UBE3A-228ENST00000638155 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
UBE3A-228ENST00000638155 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
UBE3A-228ENST00000638155 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
UBE3A-228ENST00000638155 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
UBE3A-228ENST00000638155 HRCP23327 699 aa18.52■□□□□ 0.56
UBE3A-228ENST00000638155 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
UBE3A-228ENST00000638155 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
UBE3A-228ENST00000638155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
UBE3A-228ENST00000638155 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
UBE3A-228ENST00000638155 ANP32AP39687 249 aaKnown RBP18.39■□□□□ 0.53
UBE3A-228ENST00000638155 ITGAEP38570 1179 aa18.38■□□□□ 0.53
UBE3A-228ENST00000638155 PPARGC1BQ86YN6 1023 aaKnown RBP18.38■□□□□ 0.53
UBE3A-228ENST00000638155 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
UBE3A-228ENST00000638155 BCANQ96GW7 911 aa18.3■□□□□ 0.52
UBE3A-228ENST00000638155 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
UBE3A-228ENST00000638155 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
UBE3A-228ENST00000638155 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
UBE3A-228ENST00000638155 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
UBE3A-228ENST00000638155 CDK11BP21127 795 aaKnown RBP18.15■□□□□ 0.5
UBE3A-228ENST00000638155 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
UBE3A-228ENST00000638155 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
UBE3A-228ENST00000638155 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
UBE3A-228ENST00000638155 NEFMP07197 916 aa18.09■□□□□ 0.49
UBE3A-228ENST00000638155 ANP32CO43423 234 aa18.08■□□□□ 0.48
UBE3A-228ENST00000638155 UPF2Q9HAU5 1272 aaKnown RBP18.05■□□□□ 0.48
UBE3A-228ENST00000638155 ARXQ96QS3 562 aa17.89■□□□□ 0.45
UBE3A-228ENST00000638155 NBR1Q14596 966 aa17.85■□□□□ 0.45
UBE3A-228ENST00000638155 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
UBE3A-228ENST00000638155 ZNF326Q5BKZ1 582 aaKnown RBP17.82■□□□□ 0.44
UBE3A-228ENST00000638155 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
UBE3A-228ENST00000638155 FAM50AQ14320 339 aaKnown RBP17.81■□□□□ 0.44
UBE3A-228ENST00000638155 TRIM44Q96DX7 344 aaPredicted RBP17.78■□□□□ 0.44
UBE3A-228ENST00000638155 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
UBE3A-228ENST00000638155 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
UBE3A-228ENST00000638155 ANP32EQ9BTT0 268 aa17.63■□□□□ 0.41
UBE3A-228ENST00000638155 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
UBE3A-228ENST00000638155 DNTTIP2Q5QJE6 756 aaKnown RBP17.61■□□□□ 0.41
UBE3A-228ENST00000638155 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
UBE3A-228ENST00000638155 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
UBE3A-228ENST00000638155 PTMAP06454 111 aaKnown RBP17.59■□□□□ 0.41
UBE3A-228ENST00000638155 FKBP8Q14318 412 aa17.57■□□□□ 0.4
UBE3A-228ENST00000638155 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
UBE3A-228ENST00000638155 BECN1Q14457 450 aa17.53■□□□□ 0.4
UBE3A-228ENST00000638155 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.4
UBE3A-228ENST00000638155 MYH16Q9H6N6 1097 aa17.52■□□□□ 0.4
UBE3A-228ENST00000638155 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
UBE3A-228ENST00000638155 ERICH6BQ5W0A0 696 aa17.48■□□□□ 0.39
UBE3A-228ENST00000638155 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
UBE3A-228ENST00000638155 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
UBE3A-228ENST00000638155 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
UBE3A-228ENST00000638155 GOLGA6L6A8MZA4 724 aa17.46■□□□□ 0.39
UBE3A-228ENST00000638155 FBLN2P98095 1184 aa17.38■□□□□ 0.37
UBE3A-228ENST00000638155 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
UBE3A-228ENST00000638155 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
UBE3A-228ENST00000638155 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
UBE3A-228ENST00000638155 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
UBE3A-228ENST00000638155 HNRNPUQ00839 825 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBE3A-228ENST00000638155 NRDCO43847 1150 aa17.34■□□□□ 0.37
UBE3A-228ENST00000638155 A0A0G2JS52 829 aa17.33■□□□□ 0.37
UBE3A-228ENST00000638155 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
UBE3A-228ENST00000638155 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
UBE3A-228ENST00000638155 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.35
UBE3A-228ENST00000638155 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
UBE3A-228ENST00000638155 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■□□□□ 10.7
UBE3A-228ENST00000638155 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
UBE3A-228ENST00000638155 RTN4Q9NQC3 1192 aaKnown RBP17.22■□□□□ 0.35
UBE3A-228ENST00000638155 TNNT3P45378 269 aaPredicted RBP17.22■□□□□ 0.35
UBE3A-228ENST00000638155 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
UBE3A-228ENST00000638155 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
UBE3A-228ENST00000638155 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms