RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
PKD1-201ENST00000262304 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
PKD1-201ENST00000262304 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
PKD1-201ENST00000262304 MYT1Q01538 1121 aa16.36■□□□□ 0.21
PKD1-201ENST00000262304 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
PKD1-201ENST00000262304 NISCHQ9Y2I1 1504 aa16.34■□□□□ 0.21
PKD1-201ENST00000262304 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
PKD1-201ENST00000262304 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
PKD1-201ENST00000262304 YTHDC1Q96MU7 727 aaKnown RBP15.9■□□□□ 0.14
PKD1-201ENST00000262304 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
PKD1-201ENST00000262304 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
PKD1-201ENST00000262304 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
PKD1-201ENST00000262304 CENPBP07199 599 aaPredicted RBP15.74■□□□□ 0.11
PKD1-201ENST00000262304 APLP2Q06481 763 aa15.64■□□□□ 0.09
PKD1-201ENST00000262304 RANGAP1P46060 587 aaPredicted RBP15.64■□□□□ 0.09
PKD1-201ENST00000262304 FAM9AQ8IZU1 332 aaPredicted RBP15.64■□□□□ 0.09
PKD1-201ENST00000262304 NEFLP07196 543 aa15.57■□□□□ 0.08
PKD1-201ENST00000262304 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
PKD1-201ENST00000262304 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
PKD1-201ENST00000262304 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
PKD1-201ENST00000262304 PPARGC1BQ86YN6 1023 aaKnown RBP15.29■□□□□ 0.04
PKD1-201ENST00000262304 POLR3GLQ9BT43 218 aa15.2■□□□□ 0.02
PKD1-201ENST00000262304 ZEB1P37275 1124 aaPredicted RBP15.11■□□□□ 0.01
PKD1-201ENST00000262304 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
PKD1-201ENST00000262304 RTL5Q5HYW3 569 aaPredicted RBP15.04■□□□□ -0
PKD1-201ENST00000262304 BCANQ96GW7 911 aa14.94□□□□□ -0.02
PKD1-201ENST00000262304 CLSPNQ9HAW4 1339 aa14.91□□□□□ -0.02
PKD1-201ENST00000262304 CHIC1Q5VXU3 224 aa14.9□□□□□ -0.02
PKD1-201ENST00000262304 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
PKD1-201ENST00000262304 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
PKD1-201ENST00000262304 ITGAEP38570 1179 aa14.85□□□□□ -0.03
PKD1-201ENST00000262304 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
PKD1-201ENST00000262304 HRCP23327 699 aa14.83□□□□□ -0.04
PKD1-201ENST00000262304 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
PKD1-201ENST00000262304 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
PKD1-201ENST00000262304 MYT1LQ9UL68 1186 aa14.68□□□□□ -0.06
PKD1-201ENST00000262304 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
PKD1-201ENST00000262304 GTF3C3Q9Y5Q9 886 aa14.58□□□□□ -0.07
PKD1-201ENST00000262304 NPM2Q86SE8 214 aaKnown RBP14.55□□□□□ -0.08
PKD1-201ENST00000262304 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
PKD1-201ENST00000262304 ARXQ96QS3 562 aa14.5□□□□□ -0.09
PKD1-201ENST00000262304 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
PKD1-201ENST00000262304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
PKD1-201ENST00000262304 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
PKD1-201ENST00000262304 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
PKD1-201ENST00000262304 LOC105371045A0A1W2PR82 267 aa14.4□□□□□ -0.1
PKD1-201ENST00000262304 NBR1Q14596 966 aa14.38□□□□□ -0.11
PKD1-201ENST00000262304 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
PKD1-201ENST00000262304 CANXP27824 592 aaKnown RBP14.32□□□□□ -0.12
PKD1-201ENST00000262304 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
PKD1-201ENST00000262304 ZNF326Q5BKZ1 582 aaKnown RBP14.29□□□□□ -0.12
PKD1-201ENST00000262304 ABCC9O60706 1549 aa14.28□□□□□ -0.12
PKD1-201ENST00000262304 GLIPR1L2Q4G1C9 344 aa14.27□□□□□ -0.13
PKD1-201ENST00000262304 ANP32AP39687 249 aaKnown RBP14.26□□□□□ -0.13
PKD1-201ENST00000262304 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■■□□ 15.3
PKD1-201ENST00000262304 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
PKD1-201ENST00000262304 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
PKD1-201ENST00000262304 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
PKD1-201ENST00000262304 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
PKD1-201ENST00000262304 TRIM52Q96A61 297 aa14.12□□□□□ -0.15
PKD1-201ENST00000262304 ANP32CO43423 234 aa14.1□□□□□ -0.15
PKD1-201ENST00000262304 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
PKD1-201ENST00000262304 ACIN1Q9UKV3 1341 aaKnown RBP14.06□□□□□ -0.16
PKD1-201ENST00000262304 FKBP8Q14318 412 aa14.05□□□□□ -0.16
PKD1-201ENST00000262304 TPRNQ4KMQ1 711 aa14.01□□□□□ -0.17
PKD1-201ENST00000262304 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
PKD1-201ENST00000262304 SALL2Q9Y467 1007 aaPredicted RBP13.97□□□□□ -0.17
PKD1-201ENST00000262304 TULP1O00294 542 aaPredicted RBP13.91□□□□□ -0.18
PKD1-201ENST00000262304 FBLN2P98095 1184 aa13.91□□□□□ -0.18
PKD1-201ENST00000262304 NEFMP07197 916 aa13.87□□□□□ -0.19
PKD1-201ENST00000262304 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
PKD1-201ENST00000262304 ARID4BQ4LE39 1312 aaPredicted RBP13.86□□□□□ -0.19
PKD1-201ENST00000262304 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
PKD1-201ENST00000262304 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
PKD1-201ENST00000262304 TNNT2P45379 298 aaPredicted RBP13.82□□□□□ -0.2
PKD1-201ENST00000262304 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
PKD1-201ENST00000262304 ARID3CA6NKF2 412 aa13.81□□□□□ -0.2
PKD1-201ENST00000262304 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
PKD1-201ENST00000262304 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
PKD1-201ENST00000262304 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
PKD1-201ENST00000262304 ARID3AQ99856 593 aa13.79□□□□□ -0.2
PKD1-201ENST00000262304 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
PKD1-201ENST00000262304 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
PKD1-201ENST00000262304 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
PKD1-201ENST00000262304 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
PKD1-201ENST00000262304 CCDC136Q96JN2 1154 aa13.74□□□□□ -0.21
PKD1-201ENST00000262304 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
PKD1-201ENST00000262304 PTMAP06454 111 aaKnown RBP13.73□□□□□ -0.21
PKD1-201ENST00000262304 LAS1LQ9Y4W2 734 aaKnown RBP13.73□□□□□ -0.21
PKD1-201ENST00000262304 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
PKD1-201ENST00000262304 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
PKD1-201ENST00000262304 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
PKD1-201ENST00000262304 DNTTIP2Q5QJE6 756 aaKnown RBP13.71□□□□□ -0.22
PKD1-201ENST00000262304 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
PKD1-201ENST00000262304 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
PKD1-201ENST00000262304 A0A0G2JS52 829 aa13.68□□□□□ -0.22
PKD1-201ENST00000262304 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
PKD1-201ENST00000262304 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
PKD1-201ENST00000262304 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
PKD1-201ENST00000262304 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms