RNA–Protein interactions for RNA: ENST00000428984.6

UBE3A-203, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-203ENST00000428984 AEBP2Q6ZN18 517 aaPredicted RBP10.9□□□□□ -0.66
UBE3A-203ENST00000428984 CHIC1Q5VXU3 224 aa10.51□□□□□ -0.73
UBE3A-203ENST00000428984 NISCHQ9Y2I1 1504 aa10.4□□□□□ -0.74
UBE3A-203ENST00000428984 SLC24A1O60721 1099 aa9.4□□□□□ -0.9
UBE3A-203ENST00000428984 CCDC180Q9P1Z9 1646 aa9.25□□□□□ -0.93
UBE3A-203ENST00000428984 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
UBE3A-203ENST00000428984 SENP3Q9H4L4 574 aaPredicted RBP9.24□□□□□ -0.93
UBE3A-203ENST00000428984 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
UBE3A-203ENST00000428984 MYT1Q01538 1121 aa9.2□□□□□ -0.94
UBE3A-203ENST00000428984 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
UBE3A-203ENST00000428984 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
UBE3A-203ENST00000428984 APLP2Q06481 763 aa8.84□□□□□ -0.99
UBE3A-203ENST00000428984 DCAF1Q9Y4B6 1507 aa8.83□□□□□ -1
UBE3A-203ENST00000428984 MYO15BQ96JP2 1530 aa8.8□□□□□ -1
UBE3A-203ENST00000428984 ERICH6Q7L0X2 663 aa8.78□□□□□ -1
UBE3A-203ENST00000428984 ZCCHC6Q5VYS8 1495 aaKnown RBP8.78□□□□□ -1
UBE3A-203ENST00000428984 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
UBE3A-203ENST00000428984 FOXD1Q16676 465 aa8.61□□□□□ -1.03
UBE3A-203ENST00000428984 NACADO15069 1562 aa8.57□□□□□ -1.04
UBE3A-203ENST00000428984 BCL11AQ9H165 835 aa8.49□□□□□ -1.05
UBE3A-203ENST00000428984 PLPPR3Q6T4P5 718 aa8.47□□□□□ -1.05
UBE3A-203ENST00000428984 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
UBE3A-203ENST00000428984 EIF5BO60841 1220 aaKnown RBP8.39□□□□□ -1.07
UBE3A-203ENST00000428984 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
UBE3A-203ENST00000428984 SHROOM4Q9ULL8 1493 aa8.36□□□□□ -1.07
UBE3A-203ENST00000428984 ABCC9O60706 1549 aa8.36□□□□□ -1.07
UBE3A-203ENST00000428984 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
UBE3A-203ENST00000428984 NCBP3Q53F19 620 aaKnown RBP8.27□□□□□ -1.09
UBE3A-203ENST00000428984 EHMT2Q96KQ7 1210 aa8.23□□□□□ -1.09
UBE3A-203ENST00000428984 PPP6R1Q9UPN7 881 aa8.21□□□□□ -1.09
UBE3A-203ENST00000428984 RTN4Q9NQC3 1192 aaKnown RBP8.2□□□□□ -1.1
UBE3A-203ENST00000428984 ADRA2BP18089 450 aa8.19□□□□□ -1.1
UBE3A-203ENST00000428984 UNC13AQ9UPW8 1703 aa8.19□□□□□ -1.1
UBE3A-203ENST00000428984 SCRIBQ14160 1630 aa8.17□□□□□ -1.1
UBE3A-203ENST00000428984 BICRAQ9NZM4 1560 aa8.15□□□□□ -1.1
UBE3A-203ENST00000428984 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
UBE3A-203ENST00000428984 PIAS4Q8N2W9 510 aaPredicted RBP8.09□□□□□ -1.11
UBE3A-203ENST00000428984 SCAF1Q9H7N4 1312 aaKnown RBP8.07□□□□□ -1.12
UBE3A-203ENST00000428984 TIMELESSQ9UNS1 1208 aa8.07□□□□□ -1.12
UBE3A-203ENST00000428984 PEG3Q9GZU2 1588 aa8.07□□□□□ -1.12
UBE3A-203ENST00000428984 BAZ1AQ9NRL2 1556 aaPredicted RBP8.06□□□□□ -1.12
UBE3A-203ENST00000428984 DCAF8L2P0C7V8 631 aa8.04□□□□□ -1.12
UBE3A-203ENST00000428984 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
UBE3A-203ENST00000428984 ARXQ96QS3 562 aa8.01□□□□□ -1.13
UBE3A-203ENST00000428984 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
UBE3A-203ENST00000428984 RANGAP1P46060 587 aaPredicted RBP7.99□□□□□ -1.13
UBE3A-203ENST00000428984 RSF1Q96T23 1441 aaPredicted RBP7.98□□□□□ -1.13
UBE3A-203ENST00000428984 MSH5O43196 834 aa7.96□□□□□ -1.13
UBE3A-203ENST00000428984 SMARCA2P51531 1590 aa7.93□□□□□ -1.14
UBE3A-203ENST00000428984 MROH2BQ7Z745 1585 aa7.92□□□□□ -1.14
UBE3A-203ENST00000428984 CECR2Q9BXF3 1484 aa7.91□□□□□ -1.14
UBE3A-203ENST00000428984 HMGXB3Q12766 1538 aa7.91□□□□□ -1.14
UBE3A-203ENST00000428984 TULP1O00294 542 aaPredicted RBP7.91□□□□□ -1.14
UBE3A-203ENST00000428984 TOP2AP11388 1531 aaKnown RBP7.91□□□□□ -1.14
UBE3A-203ENST00000428984 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
UBE3A-203ENST00000428984 UBE2Q2Q8WVN8 375 aa7.89□□□□□ -1.15
UBE3A-203ENST00000428984 HRCP23327 699 aa7.89□□□□□ -1.15
UBE3A-203ENST00000428984 EIF4G1Q04637 1599 aaKnown RBP7.88□□□□□ -1.15
UBE3A-203ENST00000428984 NCAPD3P42695 1498 aa7.87□□□□□ -1.15
UBE3A-203ENST00000428984 ATAD2BQ9ULI0 1458 aa7.85□□□□□ -1.15
UBE3A-203ENST00000428984 ANO8Q9HCE9 1232 aaPredicted RBP7.84□□□□□ -1.15
UBE3A-203ENST00000428984 WIZO95785 1651 aa7.82□□□□□ -1.16
UBE3A-203ENST00000428984 PKNOX2Q96KN3 472 aa7.8□□□□□ -1.16
UBE3A-203ENST00000428984 PDIA4P13667 645 aaKnown RBP7.78□□□□□ -1.16
UBE3A-203ENST00000428984 HOMEZQ8IX15 550 aa7.78□□□□□ -1.16
UBE3A-203ENST00000428984 BAZ1BQ9UIG0 1483 aaKnown RBP7.75□□□□□ -1.17
UBE3A-203ENST00000428984 PABPN1Q86U42 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBE3A-203ENST00000428984 AMER1Q5JTC6 1135 aaPredicted RBP7.74□□□□□ -1.17
UBE3A-203ENST00000428984 ANP32EQ9BTT0 268 aa7.72□□□□□ -1.17
UBE3A-203ENST00000428984 PDE4CQ08493 712 aa7.72□□□□□ -1.17
UBE3A-203ENST00000428984 CC2D2AQ9P2K1 1620 aa7.72□□□□□ -1.17
UBE3A-203ENST00000428984 CCDC88BA6NC98 1476 aa7.71□□□□□ -1.18
UBE3A-203ENST00000428984 PPARGC1BQ86YN6 1023 aaKnown RBP7.7□□□□□ -1.18
UBE3A-203ENST00000428984 PRDM2Q13029 1718 aa7.69□□□□□ -1.18
UBE3A-203ENST00000428984 CSRNP3Q8WYN3 585 aa7.69□□□□□ -1.18
UBE3A-203ENST00000428984 KCNA4P22459 653 aa7.68□□□□□ -1.18
UBE3A-203ENST00000428984 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
UBE3A-203ENST00000428984 SUPT5HO00267 1087 aaKnown RBP7.65□□□□□ -1.18
UBE3A-203ENST00000428984 CFTRP13569 1480 aa7.65□□□□□ -1.18
UBE3A-203ENST00000428984 NPM2Q86SE8 214 aaKnown RBP7.65□□□□□ -1.19
UBE3A-203ENST00000428984 NEFLP07196 543 aa7.64□□□□□ -1.19
UBE3A-203ENST00000428984 BCL11BQ9C0K0 894 aaPredicted RBP7.62□□□□□ -1.19
UBE3A-203ENST00000428984 LAMC3Q9Y6N6 1575 aa7.62□□□□□ -1.19
UBE3A-203ENST00000428984 LOC105371045A0A1W2PR82 267 aa7.61□□□□□ -1.19
UBE3A-203ENST00000428984 HAP1P54257 671 aaPredicted RBP7.61□□□□□ -1.19
UBE3A-203ENST00000428984 CCDC136Q96JN2 1154 aa7.6□□□□□ -1.19
UBE3A-203ENST00000428984 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
UBE3A-203ENST00000428984 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
UBE3A-203ENST00000428984 DHX37Q8IY37 1157 aaKnown RBP7.59□□□□□ -1.19
UBE3A-203ENST00000428984 CHMP4AQ9BY43 222 aa7.59□□□□□ -1.2
UBE3A-203ENST00000428984 BIVM-ERCC5R4GMW8 1640 aa7.58□□□□□ -1.2
UBE3A-203ENST00000428984 SALL2Q9Y467 1007 aaPredicted RBP7.57□□□□□ -1.2
UBE3A-203ENST00000428984 CADPSQ9ULU8 1353 aa7.57□□□□□ -1.2
UBE3A-203ENST00000428984 TOP2BQ02880 1626 aa7.54□□□□□ -1.2
UBE3A-203ENST00000428984 ABCC8Q09428 1581 aa7.54□□□□□ -1.2
UBE3A-203ENST00000428984 EEA1Q15075 1411 aa7.53□□□□□ -1.2
UBE3A-203ENST00000428984 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
UBE3A-203ENST00000428984 ACIN1Q9UKV3 1341 aaKnown RBP7.53□□□□□ -1.2
UBE3A-203ENST00000428984 FGD1P98174 961 aa7.53□□□□□ -1.2
UBE3A-203ENST00000428984 A0A0U1RQG5 324 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms