RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 CHIC1Q5VXU3 224 aa9.79□□□□□ -0.84
UBE3A-202ENST00000397954 AEBP2Q6ZN18 517 aaPredicted RBP9.55□□□□□ -0.88
UBE3A-202ENST00000397954 NISCHQ9Y2I1 1504 aa9.27□□□□□ -0.92
UBE3A-202ENST00000397954 PHF23Q9BUL5 403 aaPredicted RBP8.8□□□□□ -1
UBE3A-202ENST00000397954 CCDC180Q9P1Z9 1646 aa8.56□□□□□ -1.04
UBE3A-202ENST00000397954 EHMT2Q96KQ7 1210 aa8.28□□□□□ -1.08
UBE3A-202ENST00000397954 PLPPR3Q6T4P5 718 aa8.19□□□□□ -1.1
UBE3A-202ENST00000397954 MYO15BQ96JP2 1530 aa8.05□□□□□ -1.12
UBE3A-202ENST00000397954 KCNA4P22459 653 aa7.99□□□□□ -1.13
UBE3A-202ENST00000397954 DCAF1Q9Y4B6 1507 aa7.95□□□□□ -1.14
UBE3A-202ENST00000397954 NACADO15069 1562 aa7.94□□□□□ -1.14
UBE3A-202ENST00000397954 RB1CC1Q8TDY2 1594 aa7.9□□□□□ -1.15
UBE3A-202ENST00000397954 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
UBE3A-202ENST00000397954 ADRA2BP18089 450 aa7.85□□□□□ -1.15
UBE3A-202ENST00000397954 CSRNP3Q8WYN3 585 aa7.83□□□□□ -1.16
UBE3A-202ENST00000397954 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
UBE3A-202ENST00000397954 SENP3Q9H4L4 574 aaPredicted RBP7.81□□□□□ -1.16
UBE3A-202ENST00000397954 ABCC9O60706 1549 aa7.8□□□□□ -1.16
UBE3A-202ENST00000397954 POTEDQ86YR6 584 aa7.77□□□□□ -1.16
UBE3A-202ENST00000397954 ZCCHC6Q5VYS8 1495 aaKnown RBP7.77□□□□□ -1.17
UBE3A-202ENST00000397954 UNC13AQ9UPW8 1703 aa7.67□□□□□ -1.18
UBE3A-202ENST00000397954 SLC4A1APQ9BWU0 796 aaKnown RBP7.63□□□□□ -1.19
UBE3A-202ENST00000397954 PPP6R1Q9UPN7 881 aa7.61□□□□□ -1.19
UBE3A-202ENST00000397954 RTN4Q9NQC3 1192 aaKnown RBP7.58□□□□□ -1.2
UBE3A-202ENST00000397954 BICRAQ9NZM4 1560 aa7.52□□□□□ -1.21
UBE3A-202ENST00000397954 ZBTB22O15209 634 aa7.42□□□□□ -1.22
UBE3A-202ENST00000397954 SCRIBQ14160 1630 aa7.38□□□□□ -1.23
UBE3A-202ENST00000397954 AMER1Q5JTC6 1135 aaPredicted RBP7.38□□□□□ -1.23
UBE3A-202ENST00000397954 PPP4R3CPQ6ZMV5 832 aa7.34□□□□□ -1.23
UBE3A-202ENST00000397954 SMARCA2P51531 1590 aa7.33□□□□□ -1.24
UBE3A-202ENST00000397954 EIF4G1Q04637 1599 aaKnown RBP7.33□□□□□ -1.24
UBE3A-202ENST00000397954 PEG3Q9GZU2 1588 aa7.33□□□□□ -1.24
UBE3A-202ENST00000397954 FOXD1Q16676 465 aa7.3□□□□□ -1.24
UBE3A-202ENST00000397954 HMGXB3Q12766 1538 aa7.29□□□□□ -1.24
UBE3A-202ENST00000397954 BAZ1AQ9NRL2 1556 aaPredicted RBP7.27□□□□□ -1.25
UBE3A-202ENST00000397954 NPM3O75607 178 aaKnown RBP7.27□□□□□ -1.25
UBE3A-202ENST00000397954 CC2D2AQ9P2K1 1620 aa7.27□□□□□ -1.25
UBE3A-202ENST00000397954 SMARCA4P51532 1647 aa7.24□□□□□ -1.25
UBE3A-202ENST00000397954 NCAPD3P42695 1498 aa7.21□□□□□ -1.26
UBE3A-202ENST00000397954 NCBP3Q53F19 620 aaKnown RBP7.2□□□□□ -1.26
UBE3A-202ENST00000397954 PRDM2Q13029 1718 aa7.16□□□□□ -1.26
UBE3A-202ENST00000397954 DCAF8L2P0C7V8 631 aa7.16□□□□□ -1.26
UBE3A-202ENST00000397954 CECR2Q9BXF3 1484 aa7.15□□□□□ -1.26
UBE3A-202ENST00000397954 LAMC3Q9Y6N6 1575 aa7.11□□□□□ -1.27
UBE3A-202ENST00000397954 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
UBE3A-202ENST00000397954 PABPN1Q86U42 306 aaKnown RBP eCLIP7.09□□□□□ -1.27
UBE3A-202ENST00000397954 BAZ1BQ9UIG0 1483 aaKnown RBP7.06□□□□□ -1.28
UBE3A-202ENST00000397954 TOP2AP11388 1531 aaKnown RBP7.06□□□□□ -1.28
UBE3A-202ENST00000397954 FOXD4L1Q9NU39 408 aa7.05□□□□□ -1.28
UBE3A-202ENST00000397954 CUX2O14529 1486 aa7.04□□□□□ -1.28
UBE3A-202ENST00000397954 PIAS4Q8N2W9 510 aaPredicted RBP7.02□□□□□ -1.28
UBE3A-202ENST00000397954 FKBP8Q14318 412 aa7.02□□□□□ -1.29
UBE3A-202ENST00000397954 WDR97A6NE52 1622 aa7□□□□□ -1.29
UBE3A-202ENST00000397954 MROH2BQ7Z745 1585 aa7□□□□□ -1.29
UBE3A-202ENST00000397954 PRKCSHP14314 528 aaPredicted RBP6.99□□□□□ -1.29
UBE3A-202ENST00000397954 DNAJC5BQ9UF47 199 aa6.96□□□□□ -1.29
UBE3A-202ENST00000397954 ABCC8Q09428 1581 aa6.95□□□□□ -1.3
UBE3A-202ENST00000397954 THOC2Q8NI27 1593 aaKnown RBP6.95□□□□□ -1.3
UBE3A-202ENST00000397954 PDS5BQ9NTI5 1447 aa6.94□□□□□ -1.3
UBE3A-202ENST00000397954 WIZO95785 1651 aa6.94□□□□□ -1.3
UBE3A-202ENST00000397954 CNKSR2Q8WXI2 1034 aa6.94□□□□□ -1.3
UBE3A-202ENST00000397954 RSF1Q96T23 1441 aaPredicted RBP6.93□□□□□ -1.3
UBE3A-202ENST00000397954 WDR62O43379 1518 aa6.92□□□□□ -1.3
UBE3A-202ENST00000397954 CFTRP13569 1480 aa6.92□□□□□ -1.3
UBE3A-202ENST00000397954 KIF21AQ7Z4S6 1674 aa6.89□□□□□ -1.31
UBE3A-202ENST00000397954 CADPSQ9ULU8 1353 aa6.89□□□□□ -1.31
UBE3A-202ENST00000397954 MRC2Q9UBG0 1479 aa6.88□□□□□ -1.31
UBE3A-202ENST00000397954 CEP164Q9UPV0 1460 aa6.85□□□□□ -1.31
UBE3A-202ENST00000397954 ERCC6Q03468 1493 aa6.85□□□□□ -1.31
UBE3A-202ENST00000397954 PLCB2Q00722 1185 aa6.84□□□□□ -1.31
UBE3A-202ENST00000397954 DNMBPQ6XZF7 1577 aa6.82□□□□□ -1.32
UBE3A-202ENST00000397954 TAOK2Q9UL54 1235 aa6.8□□□□□ -1.32
UBE3A-202ENST00000397954 FANCD2Q9BXW9 1451 aa6.8□□□□□ -1.32
UBE3A-202ENST00000397954 CCDC88BA6NC98 1476 aa6.78□□□□□ -1.32
UBE3A-202ENST00000397954 HAP1P54257 671 aaPredicted RBP6.78□□□□□ -1.32
UBE3A-202ENST00000397954 BIVM-ERCC5R4GMW8 1640 aa6.77□□□□□ -1.32
UBE3A-202ENST00000397954 IFT140Q96RY7 1462 aa6.77□□□□□ -1.33
UBE3A-202ENST00000397954 BCANQ96GW7 911 aa6.75□□□□□ -1.33
UBE3A-202ENST00000397954 MAPK8IP2Q13387 824 aaPredicted RBP6.75□□□□□ -1.33
UBE3A-202ENST00000397954 SLC4A2P04920 1241 aa6.75□□□□□ -1.33
UBE3A-202ENST00000397954 NESP48681 1621 aa6.73□□□□□ -1.33
UBE3A-202ENST00000397954 TARBP1Q13395 1621 aaKnown RBP6.72□□□□□ -1.33
UBE3A-202ENST00000397954 TOPBP1Q92547 1522 aa6.71□□□□□ -1.33
UBE3A-202ENST00000397954 TPRNQ4KMQ1 711 aa6.71□□□□□ -1.33
UBE3A-202ENST00000397954 SCAF1Q9H7N4 1312 aaKnown RBP6.71□□□□□ -1.33
UBE3A-202ENST00000397954 TOP2BQ02880 1626 aa6.71□□□□□ -1.34
UBE3A-202ENST00000397954 URB2Q14146 1524 aaKnown RBP6.7□□□□□ -1.34
UBE3A-202ENST00000397954 PBRM1Q86U86 1689 aa6.67□□□□□ -1.34
UBE3A-202ENST00000397954 ABCA5Q8WWZ7 1642 aa6.67□□□□□ -1.34
UBE3A-202ENST00000397954 MAGI1Q96QZ7 1491 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-202ENST00000397954 EIF4G3O43432 1585 aaKnown RBP6.66□□□□□ -1.34
UBE3A-202ENST00000397954 ABCA10Q8WWZ4 1543 aa6.66□□□□□ -1.34
UBE3A-202ENST00000397954 CUL7Q14999 1698 aa6.65□□□□□ -1.35
UBE3A-202ENST00000397954 ERICH3Q5RHP9 1530 aa6.64□□□□□ -1.35
UBE3A-202ENST00000397954 RNF216Q9NWF9 866 aaPredicted RBP6.64□□□□□ -1.35
UBE3A-202ENST00000397954 TIMELESSQ9UNS1 1208 aa6.64□□□□□ -1.35
UBE3A-202ENST00000397954 ATXN8OSP0DMR3 200 aa6.64□□□□□ -1.35
UBE3A-202ENST00000397954 POLA1P09884 1462 aaPredicted RBP6.62□□□□□ -1.35
UBE3A-202ENST00000397954 CUX1P39880 1505 aa6.62□□□□□ -1.35
UBE3A-202ENST00000397954 SYNJ1O43426 1573 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms