RNA–Protein interactions for RNA: ENST00000562586.1

CARHSP1-204, Transcript of calcium regulated heat stable protein 1, humanhuman

TSL 2

Gene CARHSP1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-204ENST00000562586 NISCHQ9Y2I1 1504 aa39.79■■■■□ 3.96
CARHSP1-204ENST00000562586 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
CARHSP1-204ENST00000562586 ABCC9O60706 1549 aa35.54■■■■□ 3.28
CARHSP1-204ENST00000562586 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
CARHSP1-204ENST00000562586 NACADO15069 1562 aa33.7■■■□□ 2.99
CARHSP1-204ENST00000562586 DCAF8L2P0C7V8 631 aa33.55■■■□□ 2.96
CARHSP1-204ENST00000562586 MYO15BQ96JP2 1530 aa33.32■■■□□ 2.92
CARHSP1-204ENST00000562586 DNAJC5BQ9UF47 199 aa33.3■■■□□ 2.92
CARHSP1-204ENST00000562586 PABPN1Q86U42 306 aaKnown RBP eCLIP33.14■■■□□ 2.9
CARHSP1-204ENST00000562586 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
CARHSP1-204ENST00000562586 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
CARHSP1-204ENST00000562586 DCAF1Q9Y4B6 1507 aa32.91■■■□□ 2.86
CARHSP1-204ENST00000562586 BICRAQ9NZM4 1560 aa32.87■■■□□ 2.85
CARHSP1-204ENST00000562586 SHROOM4Q9ULL8 1493 aa32.53■■■□□ 2.8
CARHSP1-204ENST00000562586 SCRIBQ14160 1630 aa32.43■■■□□ 2.78
CARHSP1-204ENST00000562586 CC2D2AQ9P2K1 1620 aa32.1■■■□□ 2.73
CARHSP1-204ENST00000562586 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.72
CARHSP1-204ENST00000562586 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
CARHSP1-204ENST00000562586 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
CARHSP1-204ENST00000562586 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
CARHSP1-204ENST00000562586 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
CARHSP1-204ENST00000562586 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
CARHSP1-204ENST00000562586 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
CARHSP1-204ENST00000562586 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
CARHSP1-204ENST00000562586 PEG3Q9GZU2 1588 aa30.72■■■□□ 2.51
CARHSP1-204ENST00000562586 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
CARHSP1-204ENST00000562586 ERCC6Q03468 1493 aa30.7■■■□□ 2.5
CARHSP1-204ENST00000562586 CUX2O14529 1486 aa30.63■■■□□ 2.49
CARHSP1-204ENST00000562586 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
CARHSP1-204ENST00000562586 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
CARHSP1-204ENST00000562586 NESP48681 1621 aa30.55■■■□□ 2.48
CARHSP1-204ENST00000562586 LAMC3Q9Y6N6 1575 aa30.38■■■□□ 2.45
CARHSP1-204ENST00000562586 PDS5BQ9NTI5 1447 aa30.25■■■□□ 2.43
CARHSP1-204ENST00000562586 WIZO95785 1651 aa30.23■■■□□ 2.43
CARHSP1-204ENST00000562586 THOC2Q8NI27 1593 aaKnown RBP30.2■■■□□ 2.43
CARHSP1-204ENST00000562586 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.43
CARHSP1-204ENST00000562586 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
CARHSP1-204ENST00000562586 RSF1Q96T23 1441 aaPredicted RBP30.07■■■□□ 2.4
CARHSP1-204ENST00000562586 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
CARHSP1-204ENST00000562586 TOP2AP11388 1531 aaKnown RBP29.91■■■□□ 2.38
CARHSP1-204ENST00000562586 CFTRP13569 1480 aa29.87■■■□□ 2.37
CARHSP1-204ENST00000562586 WDR62O43379 1518 aa29.86■■■□□ 2.37
CARHSP1-204ENST00000562586 CEP164Q9UPV0 1460 aa29.84■■■□□ 2.37
CARHSP1-204ENST00000562586 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
CARHSP1-204ENST00000562586 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
CARHSP1-204ENST00000562586 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
CARHSP1-204ENST00000562586 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
CARHSP1-204ENST00000562586 OSCARQ8IYS5 282 aa29.29■■■□□ 2.28
CARHSP1-204ENST00000562586 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
CARHSP1-204ENST00000562586 ABCC8Q09428 1581 aa29.26■■■□□ 2.27
CARHSP1-204ENST00000562586 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
CARHSP1-204ENST00000562586 TRIM41Q8WV44 630 aa29.19■■■□□ 2.26
CARHSP1-204ENST00000562586 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
CARHSP1-204ENST00000562586 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
CARHSP1-204ENST00000562586 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
CARHSP1-204ENST00000562586 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
CARHSP1-204ENST00000562586 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
CARHSP1-204ENST00000562586 AQRO60306 1485 aaKnown RBP eCLIP28.94■■■□□ 2.221e-24■■■■■ 47
CARHSP1-204ENST00000562586 SOGA1O94964 1423 aa28.87■■■□□ 2.21
CARHSP1-204ENST00000562586 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
CARHSP1-204ENST00000562586 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
CARHSP1-204ENST00000562586 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
CARHSP1-204ENST00000562586 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
CARHSP1-204ENST00000562586 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
CARHSP1-204ENST00000562586 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
CARHSP1-204ENST00000562586 TDRD9Q8NDG6 1382 aaKnown RBP28.79■■■□□ 2.2
CARHSP1-204ENST00000562586 CUX1P39880 1505 aa28.77■■■□□ 2.2
CARHSP1-204ENST00000562586 ARHGEF11O15085 1522 aa28.75■■■□□ 2.19
CARHSP1-204ENST00000562586 FBLN2P98095 1184 aa28.74■■■□□ 2.19
CARHSP1-204ENST00000562586 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
CARHSP1-204ENST00000562586 CHD1O14646 1710 aa28.69■■■□□ 2.18
CARHSP1-204ENST00000562586 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
CARHSP1-204ENST00000562586 GRIN2BQ13224 1484 aa28.6■■■□□ 2.17
CARHSP1-204ENST00000562586 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
CARHSP1-204ENST00000562586 CYB5RLQ6IPT4 315 aa28.57■■■□□ 2.16
CARHSP1-204ENST00000562586 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
CARHSP1-204ENST00000562586 GAPVD1Q14C86 1478 aa28.5■■■□□ 2.15
CARHSP1-204ENST00000562586 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
CARHSP1-204ENST00000562586 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
CARHSP1-204ENST00000562586 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
CARHSP1-204ENST00000562586 CLASP1Q7Z460 1538 aa28.46■■■□□ 2.15
CARHSP1-204ENST00000562586 SYNJ1O43426 1573 aa28.45■■■□□ 2.15
CARHSP1-204ENST00000562586 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
CARHSP1-204ENST00000562586 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
CARHSP1-204ENST00000562586 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
CARHSP1-204ENST00000562586 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
CARHSP1-204ENST00000562586 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
CARHSP1-204ENST00000562586 GRIN2AQ12879 1464 aa28.22■■■□□ 2.11
CARHSP1-204ENST00000562586 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
CARHSP1-204ENST00000562586 ADAMTS12P58397 1594 aa28.17■■■□□ 2.1
CARHSP1-204ENST00000562586 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
CARHSP1-204ENST00000562586 ERICH3Q5RHP9 1530 aa28.13■■■□□ 2.09
CARHSP1-204ENST00000562586 NUP160Q12769 1436 aa28.13■■■□□ 2.09
CARHSP1-204ENST00000562586 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
CARHSP1-204ENST00000562586 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
CARHSP1-204ENST00000562586 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
CARHSP1-204ENST00000562586 JPH4Q96JJ6 628 aa27.88■■■□□ 2.05
CARHSP1-204ENST00000562586 PRG4Q92954 1404 aaPredicted RBP27.86■■■□□ 2.05
CARHSP1-204ENST00000562586 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
CARHSP1-204ENST00000562586 IGF1RP08069 1367 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms