RNA–Protein interactions for RNA: ENST00000614096.4

UBE3A-207, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE3A, Length 8,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-207ENST00000614096 PELP1Q8IZL8 1130 aaKnown RBP24.72■■□□□ 1.55
UBE3A-207ENST00000614096 MYT1Q01538 1121 aa24.07■■□□□ 1.44
UBE3A-207ENST00000614096 CCER1Q8TC90 406 aaPredicted RBP23.46■■□□□ 1.35
UBE3A-207ENST00000614096 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
UBE3A-207ENST00000614096 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
UBE3A-207ENST00000614096 CENPBP07199 599 aaPredicted RBP23.04■■□□□ 1.28
UBE3A-207ENST00000614096 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
UBE3A-207ENST00000614096 ZEB1P37275 1124 aaPredicted RBP22.69■■□□□ 1.22
UBE3A-207ENST00000614096 APLP2Q06481 763 aa22.63■■□□□ 1.21
UBE3A-207ENST00000614096 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
UBE3A-207ENST00000614096 NEFLP07196 543 aa22.48■■□□□ 1.19
UBE3A-207ENST00000614096 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
UBE3A-207ENST00000614096 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
UBE3A-207ENST00000614096 DAXXQ9UER7 740 aaPredicted RBP22.15■■□□□ 1.14
UBE3A-207ENST00000614096 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
UBE3A-207ENST00000614096 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
UBE3A-207ENST00000614096 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
UBE3A-207ENST00000614096 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
UBE3A-207ENST00000614096 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.06
UBE3A-207ENST00000614096 ZNF316A6NFI3 1004 aaPredicted RBP21.51■■□□□ 1.03
UBE3A-207ENST00000614096 GLIPR1L2Q4G1C9 344 aa21.3■■□□□ 1
UBE3A-207ENST00000614096 TRIM26Q12899 539 aaPredicted RBP21.22■□□□□ 0.99
UBE3A-207ENST00000614096 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
UBE3A-207ENST00000614096 HRCP23327 699 aa21.11■□□□□ 0.97
UBE3A-207ENST00000614096 CLSPNQ9HAW4 1339 aa21.08■□□□□ 0.96
UBE3A-207ENST00000614096 MYT1LQ9UL68 1186 aa21.04■□□□□ 0.96
UBE3A-207ENST00000614096 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
UBE3A-207ENST00000614096 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
UBE3A-207ENST00000614096 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
UBE3A-207ENST00000614096 ANP32BQ92688 251 aaKnown RBP20.84■□□□□ 0.93
UBE3A-207ENST00000614096 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
UBE3A-207ENST00000614096 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.91
UBE3A-207ENST00000614096 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
UBE3A-207ENST00000614096 ZBTB47Q9UFB7 747 aaPredicted RBP20.7■□□□□ 0.9
UBE3A-207ENST00000614096 EIF5BO60841 1220 aaKnown RBP20.65■□□□□ 0.9
UBE3A-207ENST00000614096 POLR3GLQ9BT43 218 aa20.6■□□□□ 0.89
UBE3A-207ENST00000614096 GTF3C3Q9Y5Q9 886 aa20.52■□□□□ 0.87
UBE3A-207ENST00000614096 ANP32CO43423 234 aa20.42■□□□□ 0.86
UBE3A-207ENST00000614096 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
UBE3A-207ENST00000614096 UPF2Q9HAU5 1272 aaKnown RBP20.34■□□□□ 0.85
UBE3A-207ENST00000614096 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
UBE3A-207ENST00000614096 NEFMP07197 916 aa20.33■□□□□ 0.85
UBE3A-207ENST00000614096 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
UBE3A-207ENST00000614096 CANXP27824 592 aaKnown RBP20.27■□□□□ 0.84
UBE3A-207ENST00000614096 ITGAEP38570 1179 aa20.25■□□□□ 0.83
UBE3A-207ENST00000614096 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
UBE3A-207ENST00000614096 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
UBE3A-207ENST00000614096 ANP32EQ9BTT0 268 aa20.2■□□□□ 0.82
UBE3A-207ENST00000614096 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
UBE3A-207ENST00000614096 BCANQ96GW7 911 aa20.16■□□□□ 0.82
UBE3A-207ENST00000614096 CNGB1Q14028 1251 aaPredicted RBP20.12■□□□□ 0.81
UBE3A-207ENST00000614096 TRIM44Q96DX7 344 aaPredicted RBP20.11■□□□□ 0.81
UBE3A-207ENST00000614096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.09■□□□□ 0.81
UBE3A-207ENST00000614096 NCLP19338 710 aaKnown RBP20.01■□□□□ 0.79
UBE3A-207ENST00000614096 CDK11BP21127 795 aaKnown RBP19.96■□□□□ 0.79
UBE3A-207ENST00000614096 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
UBE3A-207ENST00000614096 ERICH6BQ5W0A0 696 aa19.91■□□□□ 0.78
UBE3A-207ENST00000614096 DDRGK1Q96HY6 314 aa19.87■□□□□ 0.77
UBE3A-207ENST00000614096 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
UBE3A-207ENST00000614096 BECN1Q14457 450 aa19.84■□□□□ 0.77
UBE3A-207ENST00000614096 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.84■□□□□ 0.77
UBE3A-207ENST00000614096 NBR1Q14596 966 aa19.83■□□□□ 0.77
UBE3A-207ENST00000614096 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
UBE3A-207ENST00000614096 GOLGA6L22H0YM25 854 aa19.8■□□□□ 0.76
UBE3A-207ENST00000614096 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
UBE3A-207ENST00000614096 FKBP8Q14318 412 aa19.76■□□□□ 0.75
UBE3A-207ENST00000614096 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
UBE3A-207ENST00000614096 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
UBE3A-207ENST00000614096 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
UBE3A-207ENST00000614096 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
UBE3A-207ENST00000614096 BCL11AQ9H165 835 aa19.63■□□□□ 0.73
UBE3A-207ENST00000614096 DNTTIP2Q5QJE6 756 aaKnown RBP19.61■□□□□ 0.73
UBE3A-207ENST00000614096 MYH16Q9H6N6 1097 aa19.59■□□□□ 0.73
UBE3A-207ENST00000614096 ZRSR1Q15695 479 aaKnown RBP19.59■□□□□ 0.73
UBE3A-207ENST00000614096 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
UBE3A-207ENST00000614096 PPM1GO15355 546 aaPredicted RBP19.57■□□□□ 0.72
UBE3A-207ENST00000614096 CHAF1AQ13111 956 aaPredicted RBP19.56■□□□□ 0.72
UBE3A-207ENST00000614096 GOLGA6L6A8MZA4 724 aa19.56■□□□□ 0.72
UBE3A-207ENST00000614096 HNRNPUQ00839 825 aaKnown RBP eCLIP19.56■□□□□ 0.72
UBE3A-207ENST00000614096 PTMAP06454 111 aaKnown RBP19.56■□□□□ 0.72
UBE3A-207ENST00000614096 NRDCO43847 1150 aa19.55■□□□□ 0.72
UBE3A-207ENST00000614096 ARXQ96QS3 562 aa19.54■□□□□ 0.72
UBE3A-207ENST00000614096 NAP1L5Q96NT1 182 aaPredicted RBP19.53■□□□□ 0.72
UBE3A-207ENST00000614096 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
UBE3A-207ENST00000614096 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
UBE3A-207ENST00000614096 CASC1Q6TDU7 716 aa19.43■□□□□ 0.7
UBE3A-207ENST00000614096 L1TD1Q5T7N2 865 aaKnown RBP19.43■□□□□ 0.7
UBE3A-207ENST00000614096 TMC1Q8TDI8 760 aa19.42■□□□□ 0.7
UBE3A-207ENST00000614096 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
UBE3A-207ENST00000614096 MSNP26038 577 aaKnown RBP19.34■□□□□ 0.69
UBE3A-207ENST00000614096 WDR43Q15061 677 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■□□□□ 10.7
UBE3A-207ENST00000614096 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
UBE3A-207ENST00000614096 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
UBE3A-207ENST00000614096 PTMSP20962 102 aa19.28■□□□□ 0.68
UBE3A-207ENST00000614096 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
UBE3A-207ENST00000614096 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
UBE3A-207ENST00000614096 TNNT3P45378 269 aaPredicted RBP19.22■□□□□ 0.67
UBE3A-207ENST00000614096 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
UBE3A-207ENST00000614096 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
UBE3A-207ENST00000614096 CFAP44Q96MT7 982 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms