RNA–Protein interactions for RNA: ENST00000440513.7

BRF1-205, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-205ENST00000440513 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
BRF1-205ENST00000440513 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
BRF1-205ENST00000440513 ZCCHC6Q5VYS8 1495 aaKnown RBP27.35■■□□□ 1.97
BRF1-205ENST00000440513 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
BRF1-205ENST00000440513 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
BRF1-205ENST00000440513 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
BRF1-205ENST00000440513 ABCC9O60706 1549 aa26.65■■□□□ 1.86
BRF1-205ENST00000440513 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
BRF1-205ENST00000440513 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
BRF1-205ENST00000440513 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
BRF1-205ENST00000440513 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
BRF1-205ENST00000440513 NACADO15069 1562 aa26.04■■□□□ 1.76
BRF1-205ENST00000440513 HRCP23327 699 aa25.85■■□□□ 1.73
BRF1-205ENST00000440513 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
BRF1-205ENST00000440513 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
BRF1-205ENST00000440513 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
BRF1-205ENST00000440513 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
BRF1-205ENST00000440513 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
BRF1-205ENST00000440513 LOC105371045A0A1W2PR82 267 aa25.36■■□□□ 1.65
BRF1-205ENST00000440513 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
BRF1-205ENST00000440513 PPARGC1BQ86YN6 1023 aaKnown RBP25.27■■□□□ 1.64
BRF1-205ENST00000440513 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
BRF1-205ENST00000440513 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
BRF1-205ENST00000440513 WIZO95785 1651 aa25.12■■□□□ 1.61
BRF1-205ENST00000440513 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
BRF1-205ENST00000440513 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
BRF1-205ENST00000440513 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
BRF1-205ENST00000440513 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
BRF1-205ENST00000440513 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
BRF1-205ENST00000440513 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
BRF1-205ENST00000440513 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
BRF1-205ENST00000440513 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
BRF1-205ENST00000440513 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
BRF1-205ENST00000440513 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
BRF1-205ENST00000440513 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
BRF1-205ENST00000440513 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.51
BRF1-205ENST00000440513 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
BRF1-205ENST00000440513 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
BRF1-205ENST00000440513 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
BRF1-205ENST00000440513 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
BRF1-205ENST00000440513 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
BRF1-205ENST00000440513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
BRF1-205ENST00000440513 CCER1Q8TC90 406 aaPredicted RBP24.01■■□□□ 1.43
BRF1-205ENST00000440513 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
BRF1-205ENST00000440513 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
BRF1-205ENST00000440513 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
BRF1-205ENST00000440513 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.42
BRF1-205ENST00000440513 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
BRF1-205ENST00000440513 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
BRF1-205ENST00000440513 SOGA1O94964 1423 aa23.86■■□□□ 1.41
BRF1-205ENST00000440513 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
BRF1-205ENST00000440513 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
BRF1-205ENST00000440513 TNIKQ9UKE5 1360 aa23.77■■□□□ 1.4
BRF1-205ENST00000440513 EEA1Q15075 1411 aa23.74■■□□□ 1.39
BRF1-205ENST00000440513 DIEXFQ68CQ4 756 aaKnown RBP23.7■■□□□ 1.38
BRF1-205ENST00000440513 CSRNP3Q8WYN3 585 aa23.7■■□□□ 1.38
BRF1-205ENST00000440513 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.38
BRF1-205ENST00000440513 CFTRP13569 1480 aa23.69■■□□□ 1.38
BRF1-205ENST00000440513 UBTFP17480 764 aaKnown RBP23.67■■□□□ 1.38
BRF1-205ENST00000440513 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
BRF1-205ENST00000440513 NEUROD1Q13562 356 aa23.63■■□□□ 1.37
BRF1-205ENST00000440513 GOLGA3Q08378 1498 aa23.61■■□□□ 1.37
BRF1-205ENST00000440513 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
BRF1-205ENST00000440513 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.36
BRF1-205ENST00000440513 CUX1P39880 1505 aa23.57■■□□□ 1.36
BRF1-205ENST00000440513 CENPBP07199 599 aaPredicted RBP23.56■■□□□ 1.36
BRF1-205ENST00000440513 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
BRF1-205ENST00000440513 NESP48681 1621 aa23.52■■□□□ 1.36
BRF1-205ENST00000440513 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
BRF1-205ENST00000440513 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
BRF1-205ENST00000440513 GTF3C3Q9Y5Q9 886 aa23.44■■□□□ 1.34
BRF1-205ENST00000440513 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
BRF1-205ENST00000440513 KIF21BO75037 1637 aa23.4■■□□□ 1.34
BRF1-205ENST00000440513 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
BRF1-205ENST00000440513 CLIP1P30622 1438 aa23.35■■□□□ 1.33
BRF1-205ENST00000440513 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
BRF1-205ENST00000440513 RAPGEF2Q9Y4G8 1499 aa23.31■■□□□ 1.32
BRF1-205ENST00000440513 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
BRF1-205ENST00000440513 RANGAP1P46060 587 aaPredicted RBP23.27■■□□□ 1.32
BRF1-205ENST00000440513 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
BRF1-205ENST00000440513 APLP2Q06481 763 aa23.24■■□□□ 1.31
BRF1-205ENST00000440513 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
BRF1-205ENST00000440513 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
BRF1-205ENST00000440513 CUX2O14529 1486 aa23.19■■□□□ 1.3
BRF1-205ENST00000440513 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
BRF1-205ENST00000440513 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
BRF1-205ENST00000440513 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
BRF1-205ENST00000440513 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
BRF1-205ENST00000440513 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
BRF1-205ENST00000440513 MIER1Q8N108 512 aa23.13■■□□□ 1.29
BRF1-205ENST00000440513 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
BRF1-205ENST00000440513 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
BRF1-205ENST00000440513 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
BRF1-205ENST00000440513 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
BRF1-205ENST00000440513 IGF1RP08069 1367 aa23.03■■□□□ 1.28
BRF1-205ENST00000440513 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
BRF1-205ENST00000440513 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
BRF1-205ENST00000440513 CLSPNQ9HAW4 1339 aa22.93■■□□□ 1.26
BRF1-205ENST00000440513 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
BRF1-205ENST00000440513 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms