RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
LRP1-201ENST00000243077 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
LRP1-201ENST00000243077 MYT1Q01538 1121 aa14.23□□□□□ -0.13
LRP1-201ENST00000243077 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
LRP1-201ENST00000243077 ZEB1P37275 1124 aaPredicted RBP14.03□□□□□ -0.16
LRP1-201ENST00000243077 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
LRP1-201ENST00000243077 NISCHQ9Y2I1 1504 aa14.03□□□□□ -0.16
LRP1-201ENST00000243077 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
LRP1-201ENST00000243077 APLP2Q06481 763 aa14.01□□□□□ -0.17
LRP1-201ENST00000243077 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
LRP1-201ENST00000243077 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
LRP1-201ENST00000243077 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
LRP1-201ENST00000243077 NEFLP07196 543 aa13.5□□□□□ -0.25
LRP1-201ENST00000243077 PCGF6Q9BYE7 350 aa13.45□□□□□ -0.26
LRP1-201ENST00000243077 SHROOM4Q9ULL8 1493 aa13.43□□□□□ -0.26
LRP1-201ENST00000243077 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
LRP1-201ENST00000243077 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
LRP1-201ENST00000243077 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
LRP1-201ENST00000243077 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
LRP1-201ENST00000243077 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
LRP1-201ENST00000243077 HRCP23327 699 aa13□□□□□ -0.33
LRP1-201ENST00000243077 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
LRP1-201ENST00000243077 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
LRP1-201ENST00000243077 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
LRP1-201ENST00000243077 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
LRP1-201ENST00000243077 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
LRP1-201ENST00000243077 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
LRP1-201ENST00000243077 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
LRP1-201ENST00000243077 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.38
LRP1-201ENST00000243077 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
LRP1-201ENST00000243077 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
LRP1-201ENST00000243077 ANP32CO43423 234 aa12.58□□□□□ -0.4
LRP1-201ENST00000243077 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
LRP1-201ENST00000243077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.4
LRP1-201ENST00000243077 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.4
LRP1-201ENST00000243077 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
LRP1-201ENST00000243077 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
LRP1-201ENST00000243077 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
LRP1-201ENST00000243077 NEFMP07197 916 aa12.46□□□□□ -0.41
LRP1-201ENST00000243077 ITGAEP38570 1179 aa12.45□□□□□ -0.42
LRP1-201ENST00000243077 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
LRP1-201ENST00000243077 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
LRP1-201ENST00000243077 GLIPR1L2Q4G1C9 344 aa12.43□□□□□ -0.42
LRP1-201ENST00000243077 PPARGC1BQ86YN6 1023 aaKnown RBP12.39□□□□□ -0.43
LRP1-201ENST00000243077 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
LRP1-201ENST00000243077 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
LRP1-201ENST00000243077 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
LRP1-201ENST00000243077 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
LRP1-201ENST00000243077 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
LRP1-201ENST00000243077 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
LRP1-201ENST00000243077 UPF2Q9HAU5 1272 aaKnown RBP12.32□□□□□ -0.44
LRP1-201ENST00000243077 CANXP27824 592 aaKnown RBP12.24□□□□□ -0.45
LRP1-201ENST00000243077 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
LRP1-201ENST00000243077 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.22□□□□□ -0.45
LRP1-201ENST00000243077 HSP90AA1P07900 732 aaKnown RBP12.16□□□□□ -0.46
LRP1-201ENST00000243077 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
LRP1-201ENST00000243077 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
LRP1-201ENST00000243077 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
LRP1-201ENST00000243077 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
LRP1-201ENST00000243077 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
LRP1-201ENST00000243077 BECN1Q14457 450 aa12.06□□□□□ -0.48
LRP1-201ENST00000243077 TNNT2P45379 298 aaPredicted RBP12.05□□□□□ -0.48
LRP1-201ENST00000243077 TONSLQ96HA7 1378 aa12.03□□□□□ -0.48
LRP1-201ENST00000243077 BCANQ96GW7 911 aa12.02□□□□□ -0.49
LRP1-201ENST00000243077 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
LRP1-201ENST00000243077 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
LRP1-201ENST00000243077 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
LRP1-201ENST00000243077 ZNF326Q5BKZ1 582 aaKnown RBP11.98□□□□□ -0.49
LRP1-201ENST00000243077 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
LRP1-201ENST00000243077 FKBP8Q14318 412 aa11.97□□□□□ -0.49
LRP1-201ENST00000243077 MYH16Q9H6N6 1097 aa11.97□□□□□ -0.49
LRP1-201ENST00000243077 CDCA8Q53HL2 280 aa11.96□□□□□ -0.49
LRP1-201ENST00000243077 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
LRP1-201ENST00000243077 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
LRP1-201ENST00000243077 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
LRP1-201ENST00000243077 CDK11BP21127 795 aaKnown RBP11.93□□□□□ -0.5
LRP1-201ENST00000243077 WDR43Q15061 677 aaKnown RBP eCLIP11.93□□□□□ -0.55e-7■□□□□ 11.3
LRP1-201ENST00000243077 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
LRP1-201ENST00000243077 TRIM44Q96DX7 344 aaPredicted RBP11.92□□□□□ -0.5
LRP1-201ENST00000243077 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
LRP1-201ENST00000243077 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
LRP1-201ENST00000243077 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
LRP1-201ENST00000243077 CASC1Q6TDU7 716 aa11.88□□□□□ -0.51
LRP1-201ENST00000243077 MS4A1P11836 297 aa11.87□□□□□ -0.51
LRP1-201ENST00000243077 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
LRP1-201ENST00000243077 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
LRP1-201ENST00000243077 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
LRP1-201ENST00000243077 EEA1Q15075 1411 aa11.87□□□□□ -0.51
LRP1-201ENST00000243077 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
LRP1-201ENST00000243077 DDX10Q13206 875 aaKnown RBP11.84□□□□□ -0.51
LRP1-201ENST00000243077 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.52
LRP1-201ENST00000243077 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
LRP1-201ENST00000243077 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
LRP1-201ENST00000243077 RSF1Q96T23 1441 aaPredicted RBP11.81□□□□□ -0.52
LRP1-201ENST00000243077 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
LRP1-201ENST00000243077 NRDCO43847 1150 aa11.8□□□□□ -0.52
LRP1-201ENST00000243077 FAM9BQ8IZU0 186 aa11.79□□□□□ -0.52
LRP1-201ENST00000243077 PTMSP20962 102 aa11.79□□□□□ -0.52
LRP1-201ENST00000243077 FBLN2P98095 1184 aa11.79□□□□□ -0.52
LRP1-201ENST00000243077 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms