RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-208ENST00000466101 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
CCNL1-208ENST00000466101 CCDC180Q9P1Z9 1646 aa36.39■■■■□ 3.42
CCNL1-208ENST00000466101 ABCC9O60706 1549 aa35.65■■■■□ 3.3
CCNL1-208ENST00000466101 DCAF8L2P0C7V8 631 aa34.31■■■■□ 3.08
CCNL1-208ENST00000466101 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
CCNL1-208ENST00000466101 NACADO15069 1562 aa34.18■■■■□ 3.06
CCNL1-208ENST00000466101 ZCCHC6Q5VYS8 1495 aaKnown RBP34.11■■■■□ 3.05
CCNL1-208ENST00000466101 MYO15BQ96JP2 1530 aa33.92■■■■□ 3.02
CCNL1-208ENST00000466101 DCAF1Q9Y4B6 1507 aa33.81■■■■□ 3
CCNL1-208ENST00000466101 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
CCNL1-208ENST00000466101 PABPN1Q86U42 306 aaKnown RBP eCLIP33.33■■■□□ 2.93
CCNL1-208ENST00000466101 SCRIBQ14160 1630 aa33.3■■■□□ 2.92
CCNL1-208ENST00000466101 BICRAQ9NZM4 1560 aa33.22■■■□□ 2.91
CCNL1-208ENST00000466101 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.84
CCNL1-208ENST00000466101 DNAJC5BQ9UF47 199 aa32.68■■■□□ 2.82
CCNL1-208ENST00000466101 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
CCNL1-208ENST00000466101 CC2D2AQ9P2K1 1620 aa32.23■■■□□ 2.75
CCNL1-208ENST00000466101 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
CCNL1-208ENST00000466101 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
CCNL1-208ENST00000466101 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
CCNL1-208ENST00000466101 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
CCNL1-208ENST00000466101 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
CCNL1-208ENST00000466101 SMARCA2P51531 1590 aa31.54■■■□□ 2.64
CCNL1-208ENST00000466101 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
CCNL1-208ENST00000466101 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
CCNL1-208ENST00000466101 HMGXB3Q12766 1538 aa31.39■■■□□ 2.62
CCNL1-208ENST00000466101 BAZ1BQ9UIG0 1483 aaKnown RBP31.35■■■□□ 2.61
CCNL1-208ENST00000466101 WIZO95785 1651 aa31.31■■■□□ 2.6
CCNL1-208ENST00000466101 RSF1Q96T23 1441 aaPredicted RBP31.21■■■□□ 2.59
CCNL1-208ENST00000466101 TOP2AP11388 1531 aaKnown RBP30.91■■■□□ 2.54
CCNL1-208ENST00000466101 NESP48681 1621 aa30.87■■■□□ 2.53
CCNL1-208ENST00000466101 LAMC3Q9Y6N6 1575 aa30.72■■■□□ 2.51
CCNL1-208ENST00000466101 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
CCNL1-208ENST00000466101 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
CCNL1-208ENST00000466101 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
CCNL1-208ENST00000466101 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
CCNL1-208ENST00000466101 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
CCNL1-208ENST00000466101 PDS5BQ9NTI5 1447 aa30.5■■■□□ 2.47
CCNL1-208ENST00000466101 CFTRP13569 1480 aa30.44■■■□□ 2.46
CCNL1-208ENST00000466101 THOC2Q8NI27 1593 aaKnown RBP30.36■■■□□ 2.45
CCNL1-208ENST00000466101 FANCD2Q9BXW9 1451 aa30.31■■■□□ 2.44
CCNL1-208ENST00000466101 CUX2O14529 1486 aa30.31■■■□□ 2.44
CCNL1-208ENST00000466101 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
CCNL1-208ENST00000466101 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
CCNL1-208ENST00000466101 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
CCNL1-208ENST00000466101 WDR62O43379 1518 aa30.11■■■□□ 2.41
CCNL1-208ENST00000466101 URB2Q14146 1524 aaKnown RBP30.02■■■□□ 2.4
CCNL1-208ENST00000466101 TOPBP1Q92547 1522 aa29.84■■■□□ 2.37
CCNL1-208ENST00000466101 DNMBPQ6XZF7 1577 aa29.8■■■□□ 2.36
CCNL1-208ENST00000466101 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
CCNL1-208ENST00000466101 CUX1P39880 1505 aa29.64■■■□□ 2.34
CCNL1-208ENST00000466101 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
CCNL1-208ENST00000466101 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
CCNL1-208ENST00000466101 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
CCNL1-208ENST00000466101 ZNF608Q9ULD9 1512 aaPredicted RBP29.53■■■□□ 2.32
CCNL1-208ENST00000466101 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
CCNL1-208ENST00000466101 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
CCNL1-208ENST00000466101 SOGA1O94964 1423 aa29.46■■■□□ 2.31
CCNL1-208ENST00000466101 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.32e-6■■■■□ 22.3
CCNL1-208ENST00000466101 EIF4G3O43432 1585 aaKnown RBP29.43■■■□□ 2.3
CCNL1-208ENST00000466101 SYNJ1O43426 1573 aa29.41■■■□□ 2.3
CCNL1-208ENST00000466101 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
CCNL1-208ENST00000466101 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
CCNL1-208ENST00000466101 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.299e-10■■■■■ 46.1
CCNL1-208ENST00000466101 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
CCNL1-208ENST00000466101 TDRD9Q8NDG6 1382 aaKnown RBP29.32■■■□□ 2.28
CCNL1-208ENST00000466101 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
CCNL1-208ENST00000466101 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
CCNL1-208ENST00000466101 PBRM1Q86U86 1689 aa29.12■■■□□ 2.25
CCNL1-208ENST00000466101 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
CCNL1-208ENST00000466101 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
CCNL1-208ENST00000466101 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
CCNL1-208ENST00000466101 SNAPC4Q5SXM2 1469 aa29.1■■■□□ 2.25
CCNL1-208ENST00000466101 CHD1O14646 1710 aa29.08■■■□□ 2.25
CCNL1-208ENST00000466101 OSCARQ8IYS5 282 aa29.08■■■□□ 2.25
CCNL1-208ENST00000466101 FBLN2P98095 1184 aa29.05■■■□□ 2.24
CCNL1-208ENST00000466101 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
CCNL1-208ENST00000466101 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
CCNL1-208ENST00000466101 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
CCNL1-208ENST00000466101 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
CCNL1-208ENST00000466101 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
CCNL1-208ENST00000466101 KIF27Q86VH2 1401 aa28.8■■■□□ 2.2
CCNL1-208ENST00000466101 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
CCNL1-208ENST00000466101 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
CCNL1-208ENST00000466101 GRIN2AQ12879 1464 aa28.73■■■□□ 2.19
CCNL1-208ENST00000466101 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
CCNL1-208ENST00000466101 IGF1RP08069 1367 aa28.68■■■□□ 2.18
CCNL1-208ENST00000466101 RIMBP3CA6NJZ7 1639 aa28.67■■■□□ 2.18
CCNL1-208ENST00000466101 RIMBP3BA6NNM3 1639 aa28.67■■■□□ 2.18
CCNL1-208ENST00000466101 RIMBP3Q9UFD9 1639 aa28.67■■■□□ 2.18
CCNL1-208ENST00000466101 CUL7Q14999 1698 aa28.64■■■□□ 2.17
CCNL1-208ENST00000466101 ARHGEF11O15085 1522 aa28.64■■■□□ 2.17
CCNL1-208ENST00000466101 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.17
CCNL1-208ENST00000466101 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
CCNL1-208ENST00000466101 NUP160Q12769 1436 aa28.58■■■□□ 2.17
CCNL1-208ENST00000466101 CARMIL1Q5VZK9 1371 aa28.53■■■□□ 2.16
CCNL1-208ENST00000466101 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
CCNL1-208ENST00000466101 ARAP1Q96P48 1450 aa28.41■■■□□ 2.14
CCNL1-208ENST00000466101 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
CCNL1-208ENST00000466101 SHROOM2Q13796 1616 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms