RNA–Protein interactions for RNA: ENST00000587283.5

PPP6R1-203, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-203ENST00000587283 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
PPP6R1-203ENST00000587283 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
PPP6R1-203ENST00000587283 HRCP23327 699 aa26.26■■□□□ 1.79
PPP6R1-203ENST00000587283 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
PPP6R1-203ENST00000587283 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
PPP6R1-203ENST00000587283 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
PPP6R1-203ENST00000587283 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
PPP6R1-203ENST00000587283 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
PPP6R1-203ENST00000587283 SUPT5HO00267 1087 aaKnown RBP25.66■■□□□ 1.7
PPP6R1-203ENST00000587283 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
PPP6R1-203ENST00000587283 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
PPP6R1-203ENST00000587283 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
PPP6R1-203ENST00000587283 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
PPP6R1-203ENST00000587283 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
PPP6R1-203ENST00000587283 ABCC9O60706 1549 aa24.82■■□□□ 1.56
PPP6R1-203ENST00000587283 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
PPP6R1-203ENST00000587283 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
PPP6R1-203ENST00000587283 MYT1Q01538 1121 aa24.66■■□□□ 1.54
PPP6R1-203ENST00000587283 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
PPP6R1-203ENST00000587283 ZEB1P37275 1124 aaPredicted RBP24.5■■□□□ 1.51
PPP6R1-203ENST00000587283 NACADO15069 1562 aa24.45■■□□□ 1.5
PPP6R1-203ENST00000587283 NEUROD1Q13562 356 aa24.33■■□□□ 1.48
PPP6R1-203ENST00000587283 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
PPP6R1-203ENST00000587283 GTF3C3Q9Y5Q9 886 aa24.24■■□□□ 1.47
PPP6R1-203ENST00000587283 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
PPP6R1-203ENST00000587283 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
PPP6R1-203ENST00000587283 CENPBP07199 599 aaPredicted RBP23.98■■□□□ 1.43
PPP6R1-203ENST00000587283 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
PPP6R1-203ENST00000587283 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
PPP6R1-203ENST00000587283 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
PPP6R1-203ENST00000587283 DIEXFQ68CQ4 756 aaKnown RBP23.83■■□□□ 1.41
PPP6R1-203ENST00000587283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.82■■□□□ 1.4
PPP6R1-203ENST00000587283 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
PPP6R1-203ENST00000587283 CCER1Q8TC90 406 aaPredicted RBP23.74■■□□□ 1.39
PPP6R1-203ENST00000587283 PABPN1Q86U42 306 aaKnown RBP eCLIP23.73■■□□□ 1.396e-7■■■□□ 15.9
PPP6R1-203ENST00000587283 WIZO95785 1651 aa23.7■■□□□ 1.39
PPP6R1-203ENST00000587283 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
PPP6R1-203ENST00000587283 YTHDC1Q96MU7 727 aaKnown RBP23.67■■□□□ 1.38
PPP6R1-203ENST00000587283 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
PPP6R1-203ENST00000587283 UNC13AQ9UPW8 1703 aa23.63■■□□□ 1.37
PPP6R1-203ENST00000587283 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
PPP6R1-203ENST00000587283 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
PPP6R1-203ENST00000587283 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
PPP6R1-203ENST00000587283 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
PPP6R1-203ENST00000587283 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
PPP6R1-203ENST00000587283 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
PPP6R1-203ENST00000587283 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
PPP6R1-203ENST00000587283 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
PPP6R1-203ENST00000587283 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
PPP6R1-203ENST00000587283 MIER1Q8N108 512 aa23.22■■□□□ 1.31
PPP6R1-203ENST00000587283 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
PPP6R1-203ENST00000587283 ANP32EQ9BTT0 268 aa23.05■■□□□ 1.28
PPP6R1-203ENST00000587283 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
PPP6R1-203ENST00000587283 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
PPP6R1-203ENST00000587283 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
PPP6R1-203ENST00000587283 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
PPP6R1-203ENST00000587283 TSHZ2Q9NRE2 1034 aa22.91■■□□□ 1.26
PPP6R1-203ENST00000587283 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
PPP6R1-203ENST00000587283 SOGA1O94964 1423 aa22.79■■□□□ 1.24
PPP6R1-203ENST00000587283 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
PPP6R1-203ENST00000587283 EEA1Q15075 1411 aa22.78■■□□□ 1.24
PPP6R1-203ENST00000587283 HNRNPUL2Q1KMD3 747 aaKnown RBP22.69■■□□□ 1.22
PPP6R1-203ENST00000587283 PRKCSHP14314 528 aaPredicted RBP22.67■■□□□ 1.22
PPP6R1-203ENST00000587283 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
PPP6R1-203ENST00000587283 BCANQ96GW7 911 aa22.63■■□□□ 1.21
PPP6R1-203ENST00000587283 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
PPP6R1-203ENST00000587283 TNIKQ9UKE5 1360 aa22.62■■□□□ 1.21
PPP6R1-203ENST00000587283 CLSPNQ9HAW4 1339 aa22.62■■□□□ 1.21
PPP6R1-203ENST00000587283 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
PPP6R1-203ENST00000587283 CEP162Q5TB80 1403 aa22.59■■□□□ 1.21
PPP6R1-203ENST00000587283 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
PPP6R1-203ENST00000587283 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
PPP6R1-203ENST00000587283 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
PPP6R1-203ENST00000587283 CEP164Q9UPV0 1460 aa22.46■■□□□ 1.19
PPP6R1-203ENST00000587283 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
PPP6R1-203ENST00000587283 KIF21BO75037 1637 aa22.42■■□□□ 1.18
PPP6R1-203ENST00000587283 FKBP8Q14318 412 aa22.36■■□□□ 1.17
PPP6R1-203ENST00000587283 RBM19Q9Y4C8 960 aaKnown RBP22.36■■□□□ 1.17
PPP6R1-203ENST00000587283 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
PPP6R1-203ENST00000587283 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
PPP6R1-203ENST00000587283 CFTRP13569 1480 aa22.33■■□□□ 1.16
PPP6R1-203ENST00000587283 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.16
PPP6R1-203ENST00000587283 ITGAEP38570 1179 aa22.26■■□□□ 1.15
PPP6R1-203ENST00000587283 CLIP1P30622 1438 aa22.26■■□□□ 1.15
PPP6R1-203ENST00000587283 CUX1P39880 1505 aa22.24■■□□□ 1.15
PPP6R1-203ENST00000587283 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
PPP6R1-203ENST00000587283 CC2D2AQ9P2K1 1620 aa22.23■■□□□ 1.15
PPP6R1-203ENST00000587283 MSH5O43196 834 aa22.2■■□□□ 1.14
PPP6R1-203ENST00000587283 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
PPP6R1-203ENST00000587283 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
PPP6R1-203ENST00000587283 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
PPP6R1-203ENST00000587283 VPS8Q8N3P4 1428 aa22.13■■□□□ 1.13
PPP6R1-203ENST00000587283 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
PPP6R1-203ENST00000587283 PRXQ9BXM0 1461 aa22.13■■□□□ 1.13
PPP6R1-203ENST00000587283 NEFLP07196 543 aa22.12■■□□□ 1.13
PPP6R1-203ENST00000587283 ERICH6Q7L0X2 663 aa22.09■■□□□ 1.13
PPP6R1-203ENST00000587283 APLP2Q06481 763 aa22.08■■□□□ 1.13
PPP6R1-203ENST00000587283 DHX57Q6P158 1386 aaKnown RBP22■■□□□ 1.11
PPP6R1-203ENST00000587283 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
PPP6R1-203ENST00000587283 DNAJC5BQ9UF47 199 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms