RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
BRF1-203ENST00000379937 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
BRF1-203ENST00000379937 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
BRF1-203ENST00000379937 SUPT5HO00267 1087 aaKnown RBP28.12■■■□□ 2.09
BRF1-203ENST00000379937 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
BRF1-203ENST00000379937 ZCCHC6Q5VYS8 1495 aaKnown RBP26.41■■□□□ 1.82
BRF1-203ENST00000379937 ABCC9O60706 1549 aa26.39■■□□□ 1.82
BRF1-203ENST00000379937 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
BRF1-203ENST00000379937 LOC105371045A0A1W2PR82 267 aa26.23■■□□□ 1.79
BRF1-203ENST00000379937 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
BRF1-203ENST00000379937 CCDC180Q9P1Z9 1646 aa26.01■■□□□ 1.75
BRF1-203ENST00000379937 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
BRF1-203ENST00000379937 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.73
BRF1-203ENST00000379937 SCRIBQ14160 1630 aa25.83■■□□□ 1.72
BRF1-203ENST00000379937 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.72
BRF1-203ENST00000379937 PPARGC1BQ86YN6 1023 aaKnown RBP25.79■■□□□ 1.72
BRF1-203ENST00000379937 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
BRF1-203ENST00000379937 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
BRF1-203ENST00000379937 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
BRF1-203ENST00000379937 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
BRF1-203ENST00000379937 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
BRF1-203ENST00000379937 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
BRF1-203ENST00000379937 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
BRF1-203ENST00000379937 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
BRF1-203ENST00000379937 HRCP23327 699 aa24.82■■□□□ 1.56
BRF1-203ENST00000379937 UBTFP17480 764 aaKnown RBP24.78■■□□□ 1.56
BRF1-203ENST00000379937 WIZO95785 1651 aa24.71■■□□□ 1.55
BRF1-203ENST00000379937 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
BRF1-203ENST00000379937 NACADO15069 1562 aa24.59■■□□□ 1.53
BRF1-203ENST00000379937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.56■■□□□ 1.52
BRF1-203ENST00000379937 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
BRF1-203ENST00000379937 SOGA1O94964 1423 aa24.31■■□□□ 1.48
BRF1-203ENST00000379937 CCER1Q8TC90 406 aaPredicted RBP24.3■■□□□ 1.48
BRF1-203ENST00000379937 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
BRF1-203ENST00000379937 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
BRF1-203ENST00000379937 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
BRF1-203ENST00000379937 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
BRF1-203ENST00000379937 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
BRF1-203ENST00000379937 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
BRF1-203ENST00000379937 ITGAEP38570 1179 aa24.12■■□□□ 1.45
BRF1-203ENST00000379937 P3H3Q8IVL6 736 aa24■■□□□ 1.43
BRF1-203ENST00000379937 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
BRF1-203ENST00000379937 APLP2Q06481 763 aa23.98■■□□□ 1.43
BRF1-203ENST00000379937 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
BRF1-203ENST00000379937 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.42
BRF1-203ENST00000379937 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
BRF1-203ENST00000379937 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
BRF1-203ENST00000379937 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
BRF1-203ENST00000379937 SMARCA2P51531 1590 aa23.84■■□□□ 1.41
BRF1-203ENST00000379937 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
BRF1-203ENST00000379937 CEP162Q5TB80 1403 aa23.81■■□□□ 1.4
BRF1-203ENST00000379937 ARID3CA6NKF2 412 aa23.77■■□□□ 1.4
BRF1-203ENST00000379937 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
BRF1-203ENST00000379937 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
BRF1-203ENST00000379937 ZEB1P37275 1124 aaPredicted RBP23.54■■□□□ 1.36
BRF1-203ENST00000379937 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
BRF1-203ENST00000379937 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
BRF1-203ENST00000379937 CLIP1P30622 1438 aa23.51■■□□□ 1.35
BRF1-203ENST00000379937 SYNJ1O43426 1573 aa23.49■■□□□ 1.35
BRF1-203ENST00000379937 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.34
BRF1-203ENST00000379937 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
BRF1-203ENST00000379937 GOLGA3Q08378 1498 aa23.39■■□□□ 1.34
BRF1-203ENST00000379937 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
BRF1-203ENST00000379937 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.32
BRF1-203ENST00000379937 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
BRF1-203ENST00000379937 NESP48681 1621 aa23.27■■□□□ 1.32
BRF1-203ENST00000379937 FBLN2P98095 1184 aa23.26■■□□□ 1.31
BRF1-203ENST00000379937 HIRIP3Q9BW71 556 aaPredicted RBP23.25■■□□□ 1.31
BRF1-203ENST00000379937 CUX2O14529 1486 aa23.22■■□□□ 1.31
BRF1-203ENST00000379937 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
BRF1-203ENST00000379937 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
BRF1-203ENST00000379937 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
BRF1-203ENST00000379937 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
BRF1-203ENST00000379937 KIF27Q86VH2 1401 aa23.08■■□□□ 1.29
BRF1-203ENST00000379937 EEA1Q15075 1411 aa23.08■■□□□ 1.29
BRF1-203ENST00000379937 CUX1P39880 1505 aa23.07■■□□□ 1.28
BRF1-203ENST00000379937 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
BRF1-203ENST00000379937 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
BRF1-203ENST00000379937 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
BRF1-203ENST00000379937 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
BRF1-203ENST00000379937 MIER1Q8N108 512 aa23.02■■□□□ 1.28
BRF1-203ENST00000379937 VPS8Q8N3P4 1428 aa23.01■■□□□ 1.27
BRF1-203ENST00000379937 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
BRF1-203ENST00000379937 SIN3AQ96ST3 1273 aa22.99■■□□□ 1.27
BRF1-203ENST00000379937 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
BRF1-203ENST00000379937 IGF1RP08069 1367 aa22.96■■□□□ 1.27
BRF1-203ENST00000379937 CC2D2AQ9P2K1 1620 aa22.96■■□□□ 1.27
BRF1-203ENST00000379937 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
BRF1-203ENST00000379937 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
BRF1-203ENST00000379937 KIF21BO75037 1637 aa22.91■■□□□ 1.26
BRF1-203ENST00000379937 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.26
BRF1-203ENST00000379937 FHOD3Q2V2M9 1422 aa22.89■■□□□ 1.26
BRF1-203ENST00000379937 CFTRP13569 1480 aa22.89■■□□□ 1.26
BRF1-203ENST00000379937 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.25
BRF1-203ENST00000379937 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
BRF1-203ENST00000379937 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
BRF1-203ENST00000379937 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
BRF1-203ENST00000379937 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
BRF1-203ENST00000379937 TRIM52Q96A61 297 aa22.76■■□□□ 1.23
BRF1-203ENST00000379937 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms